Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83594814

Identifier: 83594814

GI number: 83594814

Start: 4010182

End: 4011627

Strand: Reverse

Name: 83594814

Synonym: Rru_A3485

Alternate gene names: NA

Gene position: 4011627-4010182 (Counterclockwise)

Preceding gene: 83594818

Following gene: 83594807

Centisome position: 92.16

GC content: 61.69

Gene sequence:

>1446_bases
ATGAAGACAGTCGCCGACATACATGCCGACATCTTGAAGCGGCACGCCAAGTCCCCATCGCGATTCGGATACTTTTTCCT
TCAATGGATCAAGTTCATGGATCACAATGATCGGCTTTATGCGGCCCGTGGGGAGGCCGGCGAAAACTATTTGCAGTACC
GCCTCGGATTGAATCACGTGGACGAGTCGGCGGCGATCTTCGAGACCCTGCTCAGCTTCTGGAAAGAACGCGAGCAGGAG
GACCGGATCTTTTCCTATCTGACCCACGAAGACACCGACGGCAACGGCATCTGGCATTATCTGGCCGATACCCTGCGCGA
GCACGAGGGAACCTCGACCCTGCGCATGGCCCGCACCCTGCTGGCCATGGACATCGATTTCTCCAAGCGCAATCGCAGCG
GCCAGTCGCCGCTGAACAAGATGCTGGTGCCGCTGCCGCGCTGGCAGTCGATCAACGCCCTGATCCAGACCAAGCATCTG
TCGATCGAGAACATCGAGGCGGCCATCGCCGAGCGGGCGAAGGACGAGGACCAGCGCAACGCCTTGATGTCGATGATTTT
TTCCAGCGATATCGAGCAAAATCAGGCCATGTTGTCGCAGCATGTGCTGCGTCAGGCGCTCCAGCCCCAGGCCGATGTCA
CCCTGCGGGCGGCGACCTGCCGGCTGTTCTTCGATTACGTCGACACCAAGACCGGCGGCACCGCGTTCTTCAAGCTGGTG
ACCATCGCCAACCACGCCATGTTCGATGATCTGATGCGGCTGCTGATGCGCAACACCAGCGAAACGGTGGTGGCGATGGG
CGTGCCCGATATCGCCACGCGCAAGGCCTATGCCCAGGCCTATCTGGCGCGCAAGCTGCTGCGCCGCGAGCATAGCGGCG
GCGGGGTGCTGTTCAGCGCCCTGAAGGCGGGCAAGCATACCCATCTGCGCAAGATCACCAGCCTGCTGCGCAACGATGAT
CTGGTGATCCGCACCACCGTGCGCGGCGAATTGGTGCGCAAGGACCTGCCGGTCGACAAAAACTCGCCGGCGCCGACCAA
TCCCTTGCTGTCGCTGCTGCTCCAGCGCGACAAGGAAGGCAATACGGTGATGCACCGGGCGGTGCTGACGGGCGATCTCC
AGGCGCTCAAGGGCTTCTTTTCCGGCCTGACCCCCAATGACACCTATGCCATCATCCGCCTGATTCCCAATATCTGGGGG
CTGACCCTGGCCACCGCCTGCCGCCCCGAACTGGTCCAGGCCGCCCTGGCCCAGGCGGTGAAAAGCGGCAAGTTGCCGAT
GGACCGGGCCAAGGCGCTGTTTTCGGCCTATCCCAAGGATACCCGCGACATCGTTCACTTCATCGAGGAGACGGTGAACG
AAATCGAATCCCTGGCCAAGGCCGTCGGCCGCAAGGAACCCCTGCCCCCCACCTTCCGCCTGGAAACCCTGCGCGCCAAT
AAATAG

Upstream 100 bases:

>100_bases
ATACTATTTGCGGTATCGGCTGAAATCAGCTAAAAAAGGGTCTGACCCGGTCAGTAAAATTTTATCTTTTTGACTGTCAT
AGGTTAAGACAAACCAGACA

Downstream 100 bases:

>100_bases
CGCCTGGATCAGCACTCCCCCTAGATCGCCCGGGGATCTGCTTTAAGACGGGTGCTTTCCGTCCCTCTCGGATGGGGCGG
TATCGATGCGCACCACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKTVADIHADILKRHAKSPSRFGYFFLQWIKFMDHNDRLYAARGEAGENYLQYRLGLNHVDESAAIFETLLSFWKEREQE
DRIFSYLTHEDTDGNGIWHYLADTLREHEGTSTLRMARTLLAMDIDFSKRNRSGQSPLNKMLVPLPRWQSINALIQTKHL
SIENIEAAIAERAKDEDQRNALMSMIFSSDIEQNQAMLSQHVLRQALQPQADVTLRAATCRLFFDYVDTKTGGTAFFKLV
TIANHAMFDDLMRLLMRNTSETVVAMGVPDIATRKAYAQAYLARKLLRREHSGGGVLFSALKAGKHTHLRKITSLLRNDD
LVIRTTVRGELVRKDLPVDKNSPAPTNPLLSLLLQRDKEGNTVMHRAVLTGDLQALKGFFSGLTPNDTYAIIRLIPNIWG
LTLATACRPELVQAALAQAVKSGKLPMDRAKALFSAYPKDTRDIVHFIEETVNEIESLAKAVGRKEPLPPTFRLETLRAN
K

Sequences:

>Translated_481_residues
MKTVADIHADILKRHAKSPSRFGYFFLQWIKFMDHNDRLYAARGEAGENYLQYRLGLNHVDESAAIFETLLSFWKEREQE
DRIFSYLTHEDTDGNGIWHYLADTLREHEGTSTLRMARTLLAMDIDFSKRNRSGQSPLNKMLVPLPRWQSINALIQTKHL
SIENIEAAIAERAKDEDQRNALMSMIFSSDIEQNQAMLSQHVLRQALQPQADVTLRAATCRLFFDYVDTKTGGTAFFKLV
TIANHAMFDDLMRLLMRNTSETVVAMGVPDIATRKAYAQAYLARKLLRREHSGGGVLFSALKAGKHTHLRKITSLLRNDD
LVIRTTVRGELVRKDLPVDKNSPAPTNPLLSLLLQRDKEGNTVMHRAVLTGDLQALKGFFSGLTPNDTYAIIRLIPNIWG
LTLATACRPELVQAALAQAVKSGKLPMDRAKALFSAYPKDTRDIVHFIEETVNEIESLAKAVGRKEPLPPTFRLETLRAN
K
>Mature_481_residues
MKTVADIHADILKRHAKSPSRFGYFFLQWIKFMDHNDRLYAARGEAGENYLQYRLGLNHVDESAAIFETLLSFWKEREQE
DRIFSYLTHEDTDGNGIWHYLADTLREHEGTSTLRMARTLLAMDIDFSKRNRSGQSPLNKMLVPLPRWQSINALIQTKHL
SIENIEAAIAERAKDEDQRNALMSMIFSSDIEQNQAMLSQHVLRQALQPQADVTLRAATCRLFFDYVDTKTGGTAFFKLV
TIANHAMFDDLMRLLMRNTSETVVAMGVPDIATRKAYAQAYLARKLLRREHSGGGVLFSALKAGKHTHLRKITSLLRNDD
LVIRTTVRGELVRKDLPVDKNSPAPTNPLLSLLLQRDKEGNTVMHRAVLTGDLQALKGFFSGLTPNDTYAIIRLIPNIWG
LTLATACRPELVQAALAQAVKSGKLPMDRAKALFSAYPKDTRDIVHFIEETVNEIESLAKAVGRKEPLPPTFRLETLRAN
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54438; Mature: 54438

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVADIHADILKRHAKSPSRFGYFFLQWIKFMDHNDRLYAARGEAGENYLQYRLGLNHV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCC
DESAAIFETLLSFWKEREQEDRIFSYLTHEDTDGNGIWHYLADTLREHEGTSTLRMARTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
LAMDIDFSKRNRSGQSPLNKMLVPLPRWQSINALIQTKHLSIENIEAAIAERAKDEDQRN
HHHCCCHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
ALMSMIFSSDIEQNQAMLSQHVLRQALQPQADVTLRAATCRLFFDYVDTKTGGTAFFKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHH
TIANHAMFDDLMRLLMRNTSETVVAMGVPDIATRKAYAQAYLARKLLRREHSGGGVLFSA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LKAGKHTHLRKITSLLRNDDLVIRTTVRGELVRKDLPVDKNSPAPTNPLLSLLLQRDKEG
HHCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
NTVMHRAVLTGDLQALKGFFSGLTPNDTYAIIRLIPNIWGLTLATACRPELVQAALAQAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSGKLPMDRAKALFSAYPKDTRDIVHFIEETVNEIESLAKAVGRKEPLPPTFRLETLRAN
HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHCCCC
K
C
>Mature Secondary Structure
MKTVADIHADILKRHAKSPSRFGYFFLQWIKFMDHNDRLYAARGEAGENYLQYRLGLNHV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCC
DESAAIFETLLSFWKEREQEDRIFSYLTHEDTDGNGIWHYLADTLREHEGTSTLRMARTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
LAMDIDFSKRNRSGQSPLNKMLVPLPRWQSINALIQTKHLSIENIEAAIAERAKDEDQRN
HHHCCCHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
ALMSMIFSSDIEQNQAMLSQHVLRQALQPQADVTLRAATCRLFFDYVDTKTGGTAFFKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHH
TIANHAMFDDLMRLLMRNTSETVVAMGVPDIATRKAYAQAYLARKLLRREHSGGGVLFSA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LKAGKHTHLRKITSLLRNDDLVIRTTVRGELVRKDLPVDKNSPAPTNPLLSLLLQRDKEG
HHCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
NTVMHRAVLTGDLQALKGFFSGLTPNDTYAIIRLIPNIWGLTLATACRPELVQAALAQAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSGKLPMDRAKALFSAYPKDTRDIVHFIEETVNEIESLAKAVGRKEPLPPTFRLETLRAN
HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA