| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ahcY [H]
Identifier: 83594773
GI number: 83594773
Start: 3967502
End: 3968905
Strand: Reverse
Name: ahcY [H]
Synonym: Rru_A3444
Alternate gene names: 83594773
Gene position: 3968905-3967502 (Counterclockwise)
Preceding gene: 83594774
Following gene: 83594772
Centisome position: 91.18
GC content: 64.03
Gene sequence:
>1404_bases ATGAGCTTCACCGATTATGTGGTCACGGACATTTCCCTGGCGGACTGGGGTCGCAAGGAGATCGACATCGCCGAAAGCGA AATGCCCGGGCTGATGGCGACGCGGGCCGAATACGCCAAGGCCCAGCCGCTCAAGGGCGCGCGGGTCGCCGGCTCGCTGC ATATGACCATCCAGACGGCGGTGCTGATCGAGACCCTGGTGGCGCTGGGCGCCGATGTCCGCTGGGCCTCGTGTAACATC TATTCGACCCAGGACCACGCCGCCGCCGCCATCGCCGCCGCCGGCATCCCGGTTTTCGCCCGCAAGGGGGAAGGCCTGGA GGATTATTGGGACTACACCCATAAGATCTTCGAATGGGCCGATGGCGGCACGCCGAACATGATCCTTGATGACGGCGGCG ACGCCACCTTGCTCATCCACCTCGGCGCCCGCGCCGAAAAGGACGCTTCGCTGCTCGACAATCCGACCAGCGAAGAAGAG GAAGTGCTTTACGCCGCGATCAAGGCCCGTTTGGCGGCCAAGCCCGGCTGGTATTCCACCGTTCTCGCCGCGATCAAGGG CGTGACCGAGGAGACCACCACCGGCGTTCACCGGCTTTACGAGATGGAGAAGGCCGGGACCCTGCCGTTCCCGGCGATCA ACGTCAACGACTCGGTGACCAAGTCGAAGTTCGACAACAAATACGGCTGCCGCGAATCCCTGGTCGACGGCATCCGCCGC GCCACCGACGTGATGATGGCGGGCAAGGTCGCCGTGGTCGCCGGCTATGGCGATGTCGGCAAGGGCTCGTCGGAATCGCT GCGCAGCTCCGGCTGCCGGGTGCTGGTGACCGAGGTCGATCCGATCTGCGCCCTGCAGGCGGCCATGGAGGGCTTCGAGG TGGTGACCATGGAGGACGCCGCGCCGCGCGGCGATATCTTCGTGACCACCACCGGCAATATCGACGTCATCACCCTTGAT CACATGCGGGCGATGAAGGATCGGGCGATCGTTTGCAACATCGGCCATTTCGATAACGAGATCCAGGTCGCCGCCCTCAA GAACCTCACCTGGAACAACGTCAAGCCGCAGGTCGACGAGATCACCTTCCCCGATGGTCACCGCATCATCCTGCTCGCCC AGGGCCGGCTGGTGAACCTGGGGTGCGCCACCGGCCACCCCAGCTTCGTCATGAGCGCCTCGTTCACCAATCAGACCCTG GCCCAGATCGAGCTGTTCGCCAATAACGCCGATGGCAAATACGCCAACCGCGTTTACGTGCTGCCCAAGCATCTCGATGA GAAGGTGGCCCGCCTGCATCTGGAAAAGCTTGGCGTGCGCTTGTCCACCCTGTCGCCCAAGCAGGCCGCCTATATCGGCG TGACGCCCCAGGGCCCGTTCAAGGGCGAGGCCTACCGCTACTAG
Upstream 100 bases:
>100_bases TCGCCCTCGGCTAAAATCTACTTGATAAGGATATAAAGATATCTTTATATTCCCGCCGCCGCCCTCGCATGCGGCCCCTT CCCTATTGCGGAGAGCAGCA
Downstream 100 bases:
>100_bases GACCTCATACGGCTCCGGGCCTTTTTTCGCCCGACTCCGCTTGGCTGACGGCCCCTTCCGCAAGGAAGGGGCCGTTGGCG CTTTCGCCGGCGGGGGAGAT
Product: s-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSFTDYVVTDISLADWGRKEIDIAESEMPGLMATRAEYAKAQPLKGARVAGSLHMTIQTAVLIETLVALGADVRWASCNI YSTQDHAAAAIAAAGIPVFARKGEGLEDYWDYTHKIFEWADGGTPNMILDDGGDATLLIHLGARAEKDASLLDNPTSEEE EVLYAAIKARLAAKPGWYSTVLAAIKGVTEETTTGVHRLYEMEKAGTLPFPAINVNDSVTKSKFDNKYGCRESLVDGIRR ATDVMMAGKVAVVAGYGDVGKGSSESLRSSGCRVLVTEVDPICALQAAMEGFEVVTMEDAAPRGDIFVTTTGNIDVITLD HMRAMKDRAIVCNIGHFDNEIQVAALKNLTWNNVKPQVDEITFPDGHRIILLAQGRLVNLGCATGHPSFVMSASFTNQTL AQIELFANNADGKYANRVYVLPKHLDEKVARLHLEKLGVRLSTLSPKQAAYIGVTPQGPFKGEAYRY
Sequences:
>Translated_467_residues MSFTDYVVTDISLADWGRKEIDIAESEMPGLMATRAEYAKAQPLKGARVAGSLHMTIQTAVLIETLVALGADVRWASCNI YSTQDHAAAAIAAAGIPVFARKGEGLEDYWDYTHKIFEWADGGTPNMILDDGGDATLLIHLGARAEKDASLLDNPTSEEE EVLYAAIKARLAAKPGWYSTVLAAIKGVTEETTTGVHRLYEMEKAGTLPFPAINVNDSVTKSKFDNKYGCRESLVDGIRR ATDVMMAGKVAVVAGYGDVGKGSSESLRSSGCRVLVTEVDPICALQAAMEGFEVVTMEDAAPRGDIFVTTTGNIDVITLD HMRAMKDRAIVCNIGHFDNEIQVAALKNLTWNNVKPQVDEITFPDGHRIILLAQGRLVNLGCATGHPSFVMSASFTNQTL AQIELFANNADGKYANRVYVLPKHLDEKVARLHLEKLGVRLSTLSPKQAAYIGVTPQGPFKGEAYRY >Mature_466_residues SFTDYVVTDISLADWGRKEIDIAESEMPGLMATRAEYAKAQPLKGARVAGSLHMTIQTAVLIETLVALGADVRWASCNIY STQDHAAAAIAAAGIPVFARKGEGLEDYWDYTHKIFEWADGGTPNMILDDGGDATLLIHLGARAEKDASLLDNPTSEEEE VLYAAIKARLAAKPGWYSTVLAAIKGVTEETTTGVHRLYEMEKAGTLPFPAINVNDSVTKSKFDNKYGCRESLVDGIRRA TDVMMAGKVAVVAGYGDVGKGSSESLRSSGCRVLVTEVDPICALQAAMEGFEVVTMEDAAPRGDIFVTTTGNIDVITLDH MRAMKDRAIVCNIGHFDNEIQVAALKNLTWNNVKPQVDEITFPDGHRIILLAQGRLVNLGCATGHPSFVMSASFTNQTLA QIELFANNADGKYANRVYVLPKHLDEKVARLHLEKLGVRLSTLSPKQAAYIGVTPQGPFKGEAYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=464, Percent_Identity=59.4827586206897, Blast_Score=515, Evalue=1e-146, Organism=Homo sapiens, GI239937451, Length=442, Percent_Identity=59.0497737556561, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI298286489, Length=466, Percent_Identity=48.7124463519313, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=466, Percent_Identity=48.7124463519313, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=466, Percent_Identity=48.7124463519313, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI195539337, Length=466, Percent_Identity=48.7124463519313, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI21361647, Length=466, Percent_Identity=47.2103004291845, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=59.5698924731183, Blast_Score=524, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=59.2050209205021, Blast_Score=521, Evalue=1e-149, Organism=Drosophila melanogaster, GI24642172, Length=469, Percent_Identity=61.1940298507463, Blast_Score=525, Evalue=1e-149, Organism=Drosophila melanogaster, GI24656245, Length=467, Percent_Identity=49.4646680942184, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553387, Length=466, Percent_Identity=50.4291845493562, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI45553385, Length=465, Percent_Identity=50.3225806451613, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50617; Mature: 50486
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTDYVVTDISLADWGRKEIDIAESEMPGLMATRAEYAKAQPLKGARVAGSLHMTIQTA CCCCCEEEEEEEHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEEEEHHHHH VLIETLVALGADVRWASCNIYSTQDHAAAAIAAAGIPVFARKGEGLEDYWDYTHKIFEWA HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHC DGGTPNMILDDGGDATLLIHLGARAEKDASLLDNPTSEEEEVLYAAIKARLAAKPGWYST CCCCCCEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH VLAAIKGVTEETTTGVHRLYEMEKAGTLPFPAINVNDSVTKSKFDNKYGCRESLVDGIRR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCHHHHHHHHHHH ATDVMMAGKVAVVAGYGDVGKGSSESLRSSGCRVLVTEVDPICALQAAMEGFEVVTMEDA HHHHHEECCEEEEECCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCC APRGDIFVTTTGNIDVITLDHMRAMKDRAIVCNIGHFDNEIQVAALKNLTWNNVKPQVDE CCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCE ITFPDGHRIILLAQGRLVNLGCATGHPSFVMSASFTNQTLAQIELFANNADGKYANRVYV EECCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEE LPKHLDEKVARLHLEKLGVRLSTLSPKQAAYIGVTPQGPFKGEAYRY ECHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SFTDYVVTDISLADWGRKEIDIAESEMPGLMATRAEYAKAQPLKGARVAGSLHMTIQTA CCCCEEEEEEEHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEEEEHHHHH VLIETLVALGADVRWASCNIYSTQDHAAAAIAAAGIPVFARKGEGLEDYWDYTHKIFEWA HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHC DGGTPNMILDDGGDATLLIHLGARAEKDASLLDNPTSEEEEVLYAAIKARLAAKPGWYST CCCCCCEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH VLAAIKGVTEETTTGVHRLYEMEKAGTLPFPAINVNDSVTKSKFDNKYGCRESLVDGIRR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCHHHHHHHHHHH ATDVMMAGKVAVVAGYGDVGKGSSESLRSSGCRVLVTEVDPICALQAAMEGFEVVTMEDA HHHHHEECCEEEEECCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCC APRGDIFVTTTGNIDVITLDHMRAMKDRAIVCNIGHFDNEIQVAALKNLTWNNVKPQVDE CCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCE ITFPDGHRIILLAQGRLVNLGCATGHPSFVMSASFTNQTLAQIELFANNADGKYANRVYV EECCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEE LPKHLDEKVARLHLEKLGVRLSTLSPKQAAYIGVTPQGPFKGEAYRY ECHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]