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The map label for this gene is 83594678

Identifier: 83594678

GI number: 83594678

Start: 3863698

End: 3864180

Strand: Direct

Name: 83594678

Synonym: Rru_A3349

Alternate gene names: NA

Gene position: 3863698-3864180 (Clockwise)

Preceding gene: 83594676

Following gene: 83594679

Centisome position: 88.76

GC content: 63.98

Gene sequence:

>483_bases
ATGCCCGCTCTTGACGTTCGGCCCCTGCCCGCCATGATTTTCGCCAGCCTGCGCCATATCGGACCCTACGGCGAGGCCGG
AGAGACCTTTCGCAAGATCACCGACTGGGCGGTCAGCGAAGGGGTGATGACCCCGGAAACCCAAATCCTCGGCCTGTCTT
ACGACGATCCGAAGACGACCCCGGCCGAAATCCTGCGCTATGACGCCTGCGTGACGTTGAAAACCCCCGTCGCCCTGCCC
CCCGGCATGCAGTTGATGGCCTTGCCCGCCTGTTCGTGGGTGATGATGACCCACAAGGGTCCCTATGAAACGATGGGCGA
GACCTTCACCAAGCTGTATGCCGCCCTGGCCGAGCACCCCACCCTGGTGCCGATCGCCACCGGCGCCATCGAAATCTATG
TCAATGATCCCGCCACCACCGCGCCGGCCGATCTGATCACCGAACTGGGCGTCGCCGTTCTGGAGGGGGCCGACGGCTTC
TGA

Upstream 100 bases:

>100_bases
CGGGCGGGGAACCAAAGACCCCCTTGCGGGATTCCGGGTGGGCGCTTGCCCCCTCTTCGCGTTAAACTATCCCCTTGGTG
TTCCCTGATCGGAGGCTTCG

Downstream 100 bases:

>100_bases
CATCGTGGCCCATCGGGGCGGCCCAACGGCGCGATCCGACGGCCGCGGCTTTGCCGACCATTCTTGACGGATGGGCGCGG
CCGGCTTATTTCCGACTCAG

Product: transcription activator, effector binding

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; DNA Gyrase Inhibitor; Transcriptional Regulator; AraC Family Regulatory Protein; AraC-Family Regulatory Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Transcriptional Regulator Protein; AraC Family Regulatory Helix-Turn-Helix; AraC Type Transcriptional Regulator

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPALDVRPLPAMIFASLRHIGPYGEAGETFRKITDWAVSEGVMTPETQILGLSYDDPKTTPAEILRYDACVTLKTPVALP
PGMQLMALPACSWVMMTHKGPYETMGETFTKLYAALAEHPTLVPIATGAIEIYVNDPATTAPADLITELGVAVLEGADGF

Sequences:

>Translated_160_residues
MPALDVRPLPAMIFASLRHIGPYGEAGETFRKITDWAVSEGVMTPETQILGLSYDDPKTTPAEILRYDACVTLKTPVALP
PGMQLMALPACSWVMMTHKGPYETMGETFTKLYAALAEHPTLVPIATGAIEIYVNDPATTAPADLITELGVAVLEGADGF
>Mature_159_residues
PALDVRPLPAMIFASLRHIGPYGEAGETFRKITDWAVSEGVMTPETQILGLSYDDPKTTPAEILRYDACVTLKTPVALPP
GMQLMALPACSWVMMTHKGPYETMGETFTKLYAALAEHPTLVPIATGAIEIYVNDPATTAPADLITELGVAVLEGADGF

Specific function: Unknown

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17150; Mature: 17019

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALDVRPLPAMIFASLRHIGPYGEAGETFRKITDWAVSEGVMTPETQILGLSYDDPKTT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
PAEILRYDACVTLKTPVALPPGMQLMALPACSWVMMTHKGPYETMGETFTKLYAALAEHP
HHHHHHHCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
TLVPIATGAIEIYVNDPATTAPADLITELGVAVLEGADGF
CEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PALDVRPLPAMIFASLRHIGPYGEAGETFRKITDWAVSEGVMTPETQILGLSYDDPKTT
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
PAEILRYDACVTLKTPVALPPGMQLMALPACSWVMMTHKGPYETMGETFTKLYAALAEHP
HHHHHHHCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
TLVPIATGAIEIYVNDPATTAPADLITELGVAVLEGADGF
CEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA