Click here to switch to the map view.

The map label for this gene is 83594644

Identifier: 83594644

GI number: 83594644

Start: 3822138

End: 3822866

Strand: Reverse

Name: 83594644

Synonym: Rru_A3314

Alternate gene names: NA

Gene position: 3822866-3822138 (Counterclockwise)

Preceding gene: 83594645

Following gene: 83594643

Centisome position: 87.82

GC content: 54.18

Gene sequence:

>729_bases
GTGTCACAAACCTCTGGCTCCTTGGGGGGCCGTCCCGCTACCGAATTTTGGCTGAACAAAAAGCAGGCCCTTTTCATTAT
CGCCAAATCGGAAACGTCCCTGGCCGTCGATATCACCATCAAGGTTATCGAGAAGTTTGACGCTTACGAACGTGGCCTGA
TTTCCAACGCTCCCGCCGTTGCCGCTCTCCCGGACTTCAACGATCCGGCCGAAGCCGCTCTCCCTATCGTTCACGTCAAG
GATGGGACGGTGTTCGCCAATAGCCGGGACGTGGCTGCCTATTTCGGGAAGCGCCACGATCATGTACTGGACAAGATCAA
TAAGATCTGGCTGCGCGCGCCTCATAGGGGTCTCCCTAATTTTCGGGAAACCCCTATGACCAATTTTCAGAATGGGCAAG
AGTATCGCACCTTCGATATGACCAAGGATGGTTTCACGTTCCTGGTTATGGGTTTCACAGGAGCGGAGGCCGAAGGCTTC
AAGTGGAAGTACATTGACCGCTTCAATGAAATGGAAGAGTGCCTTCGCAATCCTCCCGCCGTTCCCGCTCTCCCTGCCGT
TCCCTCTGCCGCTCTCCCCGTCGTTCACATTAAGGATGGGAAGGTGTTCGCCAATAGCCGGGACGTTGCTGCCTATTCCG
GGAAGCTTCACAAAGACGTGCTGCGTGATATCGACCAAACGCTTGAAAACATTCATGACGCAAATCTGCGTTCTGGCCCT
TATTGCTGA

Upstream 100 bases:

>100_bases
GGACCTTGCGGAGGAATTGGGGTTCTCCGAACCTCGTTGGATCCGCAAGCTCATTAAGCGATATGAGGCGGATTTGGAGC
GTTTGGGAGTTTGTGCCACC

Downstream 100 bases:

>100_bases
AATCTCAGCCCAATGGTTTCGTCCCATCAAAGTCGAGACCAAGGTCGGCTTCGGTACTCGCAGGGATGATGCCTTCAGCA
TGACCCGCGACGGGTTCACG

Product: phage-encoded protein-like

Products: NA

Alternate protein names: Rha Family Phage Regulatory Protein; Phage Regulatory Protein Rha Family; Antirepressor; Phage-Encoded Protein-Like Protein; Antirepressor Phage; Gp26 Protein; Antirepressor Rha Family; Phage Regulatory Protein

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSQTSGSLGGRPATEFWLNKKQALFIIAKSETSLAVDITIKVIEKFDAYERGLISNAPAVAALPDFNDPAEAALPIVHVK
DGTVFANSRDVAAYFGKRHDHVLDKINKIWLRAPHRGLPNFRETPMTNFQNGQEYRTFDMTKDGFTFLVMGFTGAEAEGF
KWKYIDRFNEMEECLRNPPAVPALPAVPSAALPVVHIKDGKVFANSRDVAAYSGKLHKDVLRDIDQTLENIHDANLRSGP
YC

Sequences:

>Translated_242_residues
MSQTSGSLGGRPATEFWLNKKQALFIIAKSETSLAVDITIKVIEKFDAYERGLISNAPAVAALPDFNDPAEAALPIVHVK
DGTVFANSRDVAAYFGKRHDHVLDKINKIWLRAPHRGLPNFRETPMTNFQNGQEYRTFDMTKDGFTFLVMGFTGAEAEGF
KWKYIDRFNEMEECLRNPPAVPALPAVPSAALPVVHIKDGKVFANSRDVAAYSGKLHKDVLRDIDQTLENIHDANLRSGP
YC
>Mature_241_residues
SQTSGSLGGRPATEFWLNKKQALFIIAKSETSLAVDITIKVIEKFDAYERGLISNAPAVAALPDFNDPAEAALPIVHVKD
GTVFANSRDVAAYFGKRHDHVLDKINKIWLRAPHRGLPNFRETPMTNFQNGQEYRTFDMTKDGFTFLVMGFTGAEAEGFK
WKYIDRFNEMEECLRNPPAVPALPAVPSAALPVVHIKDGKVFANSRDVAAYSGKLHKDVLRDIDQTLENIHDANLRSGPY
C

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26923; Mature: 26792

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSGSLGGRPATEFWLNKKQALFIIAKSETSLAVDITIKVIEKFDAYERGLISNAPAV
CCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCCCCE
AALPDFNDPAEAALPIVHVKDGTVFANSRDVAAYFGKRHDHVLDKINKIWLRAPHRGLPN
EECCCCCCCHHHCEEEEEEECCEEEECCCCHHHHHCCHHHHHHHHHHHHHEECCCCCCCC
FRETPMTNFQNGQEYRTFDMTKDGFTFLVMGFTGAEAEGFKWKYIDRFNEMEECLRNPPA
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCC
VPALPAVPSAALPVVHIKDGKVFANSRDVAAYSGKLHKDVLRDIDQTLENIHDANLRSGP
CCCCCCCCCCCCCEEEEECCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
YC
CC
>Mature Secondary Structure 
SQTSGSLGGRPATEFWLNKKQALFIIAKSETSLAVDITIKVIEKFDAYERGLISNAPAV
CCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCCCCE
AALPDFNDPAEAALPIVHVKDGTVFANSRDVAAYFGKRHDHVLDKINKIWLRAPHRGLPN
EECCCCCCCHHHCEEEEEEECCEEEECCCCHHHHHCCHHHHHHHHHHHHHEECCCCCCCC
FRETPMTNFQNGQEYRTFDMTKDGFTFLVMGFTGAEAEGFKWKYIDRFNEMEECLRNPPA
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCC
VPALPAVPSAALPVVHIKDGKVFANSRDVAAYSGKLHKDVLRDIDQTLENIHDANLRSGP
CCCCCCCCCCCCCEEEEECCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
YC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA