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The map label for this gene is 83594643

Identifier: 83594643

GI number: 83594643

Start: 3818575

End: 3819504

Strand: Reverse

Name: 83594643

Synonym: Rru_A3313

Alternate gene names: NA

Gene position: 3819504-3818575 (Counterclockwise)

Preceding gene: 83594644

Following gene: 83594642

Centisome position: 87.75

GC content: 55.05

Gene sequence:

>930_bases
ATGTCTAATGCTAATCCGTCCCGTTTGGGCATGGTTAACGGTACCGGTGCTGATGATGCCTTGTTCCTCAAGGTCTTTGG
CGGTGAGGTACTGACCACCTTTGCCGAGAATAACGTCTTTCTGCCGCTCACCATGTCCCGAACTATTACATCGGGCAAGT
CCGCGCAGTTCCCCGTACTCGGTAAGAATACCGCCTATTACCACGTTCCCGGTGCTGAACTGAACGGCAATAATATCCTC
AATGCCGAACGTGTGATTACCGTTGATGGTTTGCTTGTCTCGCCGGTCTTCATTGCGAAGATTGATGAGGCCAAGACCCA
CTATGACGTTCGCAGTCAATACACTTCGGAGTGTGGCGCTAGCCTGTCCAATCAGGCTGACCGTACCATTTCGCAGGTGC
TTATCAATGCCGCCCGCTCTACCGCGACCATCACCGGTGGCTTTGGCGGTACCAAGCTCGTTGATGCCGCTTTCGGTACC
GATGGGGATAAGCTTGCCGCTGGCATCTTCGGGATTGCCCAGACCTTCGACGAGAAGGACGTTCCCGAGACTGACCGTTA
TGCCGCCGTCCGTCCCGCACAGTATTACCTGATGGTGGCCGGTACGAAGGTTCTCAATCGTGATTGGGGCGGTTCCGGTA
GCTACATGGACGGCAAGGTTCTCAAGGTCGCTGGCGTGTCCATCGTCAAGAGCAACCACATTCCCAAGTCCGTTATCACG
GGATCCGCCCAGGCTGCCTATGATGGCGACTTTACCAAGACCGTTGCGGTTGGCTTCCATAAGTCTGCCGTTGGTACCGT
CAAGCTCTTGGACCTACAGACCGAAGGTGAATATCAGATCCAGCGCCAGGGCACTTTGATCGTTGCCAAGTACGCTATGG
GTCATGGTGTTCTACGGCCGGAAGCTGCGGTTGAACTGGCGTCGGCTTAA

Upstream 100 bases:

>100_bases
AAACCTGACCGTCTGCGGACGATAATCTTGCTTATAGGTGGGTTGTTCTTAGGGAAACCATAACCTTCCTTAAAAACACA
CTCACAGGATTTCTTTCAAA

Downstream 100 bases:

>100_bases
GTCGGTTATCATATCCATGAAGAATGCAGTCATGGGAAACATTGGGGGATGCCTTCGGGTGTTCCCCTTTTTTTATCTAT
AAGAACAAAATAGGAACACA

Product: minor capsid protein 10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSNANPSRLGMVNGTGADDALFLKVFGGEVLTTFAENNVFLPLTMSRTITSGKSAQFPVLGKNTAYYHVPGAELNGNNIL
NAERVITVDGLLVSPVFIAKIDEAKTHYDVRSQYTSECGASLSNQADRTISQVLINAARSTATITGGFGGTKLVDAAFGT
DGDKLAAGIFGIAQTFDEKDVPETDRYAAVRPAQYYLMVAGTKVLNRDWGGSGSYMDGKVLKVAGVSIVKSNHIPKSVIT
GSAQAAYDGDFTKTVAVGFHKSAVGTVKLLDLQTEGEYQIQRQGTLIVAKYAMGHGVLRPEAAVELASA

Sequences:

>Translated_309_residues
MSNANPSRLGMVNGTGADDALFLKVFGGEVLTTFAENNVFLPLTMSRTITSGKSAQFPVLGKNTAYYHVPGAELNGNNIL
NAERVITVDGLLVSPVFIAKIDEAKTHYDVRSQYTSECGASLSNQADRTISQVLINAARSTATITGGFGGTKLVDAAFGT
DGDKLAAGIFGIAQTFDEKDVPETDRYAAVRPAQYYLMVAGTKVLNRDWGGSGSYMDGKVLKVAGVSIVKSNHIPKSVIT
GSAQAAYDGDFTKTVAVGFHKSAVGTVKLLDLQTEGEYQIQRQGTLIVAKYAMGHGVLRPEAAVELASA
>Mature_308_residues
SNANPSRLGMVNGTGADDALFLKVFGGEVLTTFAENNVFLPLTMSRTITSGKSAQFPVLGKNTAYYHVPGAELNGNNILN
AERVITVDGLLVSPVFIAKIDEAKTHYDVRSQYTSECGASLSNQADRTISQVLINAARSTATITGGFGGTKLVDAAFGTD
GDKLAAGIFGIAQTFDEKDVPETDRYAAVRPAQYYLMVAGTKVLNRDWGGSGSYMDGKVLKVAGVSIVKSNHIPKSVITG
SAQAAYDGDFTKTVAVGFHKSAVGTVKLLDLQTEGEYQIQRQGTLIVAKYAMGHGVLRPEAAVELASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32624; Mature: 32493

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNANPSRLGMVNGTGADDALFLKVFGGEVLTTFAENNVFLPLTMSRTITSGKSAQFPVL
CCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCCEEEEEEEEEEECCCCCCCCCEE
GKNTAYYHVPGAELNGNNILNAERVITVDGLLVSPVFIAKIDEAKTHYDVRSQYTSECGA
ECCCEEEECCCCEECCCCEECCCEEEEECCEEECCEEEEEECCHHHHHHHHHHHHHHHCC
SLSNQADRTISQVLINAARSTATITGGFGGTKLVDAAFGTDGDKLAAGIFGIAQTFDEKD
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCC
VPETDRYAAVRPAQYYLMVAGTKVLNRDWGGSGSYMDGKVLKVAGVSIVKSNHIPKSVIT
CCCCCCEEEECCCEEEEEEECCCEECCCCCCCCCCCCCEEEEEECEEEEECCCCCHHHHC
GSAQAAYDGDFTKTVAVGFHKSAVGTVKLLDLQTEGEYQIQRQGTLIVAKYAMGHGVLRP
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEEEEEEECCCCCCCC
EAAVELASA
HHHHEECCC
>Mature Secondary Structure 
SNANPSRLGMVNGTGADDALFLKVFGGEVLTTFAENNVFLPLTMSRTITSGKSAQFPVL
CCCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCCEEEEEEEEEEECCCCCCCCCEE
GKNTAYYHVPGAELNGNNILNAERVITVDGLLVSPVFIAKIDEAKTHYDVRSQYTSECGA
ECCCEEEECCCCEECCCCEECCCEEEEECCEEECCEEEEEECCHHHHHHHHHHHHHHHCC
SLSNQADRTISQVLINAARSTATITGGFGGTKLVDAAFGTDGDKLAAGIFGIAQTFDEKD
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCC
VPETDRYAAVRPAQYYLMVAGTKVLNRDWGGSGSYMDGKVLKVAGVSIVKSNHIPKSVIT
CCCCCCEEEECCCEEEEEEECCCEECCCCCCCCCCCCCEEEEEECEEEEECCCCCHHHHC
GSAQAAYDGDFTKTVAVGFHKSAVGTVKLLDLQTEGEYQIQRQGTLIVAKYAMGHGVLRP
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEEEEEEECCCCCCCC
EAAVELASA
HHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA