Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83594610

Identifier: 83594610

GI number: 83594610

Start: 3777915

End: 3778415

Strand: Direct

Name: 83594610

Synonym: Rru_A3280

Alternate gene names: NA

Gene position: 3777915-3778415 (Clockwise)

Preceding gene: 83594609

Following gene: 83594611

Centisome position: 86.79

GC content: 63.07

Gene sequence:

>501_bases
ATGACGACAATCACCGCCTTGACCGAAGAGGCGACCCCCAATCCCATCGACCTGATCGAGTCCATCGCCGTCTTCAAGGA
ATGGACCTTCGAGCGCCGTGGCGACCGGGAGATGGCCGTGGAGGTTCCCGGGCATTGGTGCGACTACGGGCTGTTCTTCT
CGTGGTCGGAAGATCTCGACGCCTTGCACTTTTCCTGCGCCTTCGACATGCGCGTTCCCAAGAACCGCCGCGGCGAGATC
CTTGACCTGCTCGCCCAGTTGAACGAGCGGCTGTGGCTTGGCCATTTCGCCCTGTGGAGCGAGACCGGGATCCCGATGTT
CCGCCAGACCGTCTTGCTGTCGGGCCAGGAGTTGAACCGGGCCGGGCTGGAAGATCTGGTCGAGATCGCCGTGACCGAAT
GCGAGCGCTTCTATCCCGCCTTCCAGTTCGCCATCTGGGGCGGCAAAAGCGCGCGGGAGGCCGTGGAGGCCGCCCTTTTG
GAAACCGCTGGAGAAGCTTGA

Upstream 100 bases:

>100_bases
GATCCCATCGTCGACAGCCCGTGATCGGGCGTCGGCCCGCTCGTTCCCCGGCGCCGCTCGCGGTCCCGGATAGGCCCCCC
ACCGTTACGGAGAAGAGGGC

Downstream 100 bases:

>100_bases
GATGGGTTGCCTGACCACCGATACCCCGCTTGCGGGGGTTTCGTTGTTGCTGCTGGGCTGCGGGAAGATGGGCGGCGCCC
TGCTGAACGGCTGGCTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEI
LDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALL
ETAGEA

Sequences:

>Translated_166_residues
MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEI
LDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALL
ETAGEA
>Mature_165_residues
TTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLDALHFSCAFDMRVPKNRRGEIL
DLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNRAGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLE
TAGEA

Specific function: Unknown

COG id: COG5465

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18860; Mature: 18728

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCCCCH
ALHFSCAFDMRVPKNRRGEILDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNR
HEEHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH
AGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLETAGEA
HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTITALTEEATPNPIDLIESIAVFKEWTFERRGDREMAVEVPGHWCDYGLFFSWSEDLD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCCCCH
ALHFSCAFDMRVPKNRRGEILDLLAQLNERLWLGHFALWSETGIPMFRQTVLLSGQELNR
HEEHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH
AGLEDLVEIAVTECERFYPAFQFAIWGGKSAREAVEAALLETAGEA
HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA