| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594494
Identifier: 83594494
GI number: 83594494
Start: 3655665
End: 3656663
Strand: Direct
Name: 83594494
Synonym: Rru_A3164
Alternate gene names: NA
Gene position: 3655665-3656663 (Clockwise)
Preceding gene: 83594490
Following gene: 83594495
Centisome position: 83.98
GC content: 70.97
Gene sequence:
>999_bases ATGACGACACTGGTCTTGAATTCCTGGAAGACCGCCCGGGAGATCAAGGGCGCCTCGCGCTTCCCCTGGCAGCTGGGCGT TCTGGCCGTGGCCATCGCCCTGGTGCTGTCCGAGGGGCCGGCGGGCGATGCGGCGCGCCAAGCTTTGGCCGACGCCTTTT TGACGGTCGTTCCCTTGGTCGCCCTCGCCGTCGCCTTTGGCATGGCCCTGACGCGCCGCCTGCCCATGGCCGGTCGTCTT GCCCTACCGGCTTGGCCGATTCCGCTGGCCGCCCTGGTGCTGCTGGTGCCCTTCCCCCGGGCGGCGGCGGTCGTGCTGGC CTTGGGTGTCGCCGCCGGCCTGGGCGGAGCCTTTCTTTCCCACCTCTCCGCCGCTACCGCCCCGCGAACCGATCGGCCCC TTGAGCGGCCCTGGCCCGGGGTGGTGGTGGCGCTGTGGGCGGTGATGCTGCTGGGCGGCTTGGCGCTTACCCTGGCCTCG GCCCTGGGCTTTGCCGTCGGTGAGGGCGGCCGCTTTGGCCTGTCTTCCCTCGGCCTGCCGATGGCTTTCGCCATCTTCGG CGCCCTTGCGGTTCTGGCCCTTTGGGCGATCGGCCCGATCCTCGGCGATCGACGGCCATCCGTGCGCCCCGTCCCGCCGC TGGCGCCGCTGGCGCGGCTGATGGACGACACCAACACCTTGGGCGCCTGGGTCATCGCCGCCTTCGTCACCACCCAGGTG GCTCTGGCCCTCGGGCATCCCGCCCTCGCCGATTGGCTGGTATTCGCCGCCCCCTTGTTGCCATTGATCGGCGTCGCCTT TGGCCTGCTGCCCGGTGTCGGTCCGCAAATCCTCGTCGCCACCCTTGTCGTTGGCGGGGGAACGCCGGTGTCGATGCTGA TCGCCACGGTGCTGGCGGCAGGCCTGTCCGTCGGCGCGCCTTCGACGACAACGGCCCGGCTTGTGCCCCTTGGCCTTGGC CTGCTTGGCGGGTATGGCGCTTACGCCCTGGGCTGGTAG
Upstream 100 bases:
>100_bases GGAACCGCAATTTTCCTCTGTATGAAATTAAGAATGAATTGCATAATCCTTTTCGACGCTCATGCGTTAATCGGGGCGAG AGAAGGGGAGAAAGCCTATC
Downstream 100 bases:
>100_bases GCCACGGGTCTCTTCCCTTCGGCCGGCGGCGGGGTTACCCTGCCCTCCCGCTTCCGGTCTGGAGAATCCCCCGTGGCCCC GCCCGTCGATGCCTTCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTTLVLNSWKTAREIKGASRFPWQLGVLAVAIALVLSEGPAGDAARQALADAFLTVVPLVALAVAFGMALTRRLPMAGRL ALPAWPIPLAALVLLVPFPRAAAVVLALGVAAGLGGAFLSHLSAATAPRTDRPLERPWPGVVVALWAVMLLGGLALTLAS ALGFAVGEGGRFGLSSLGLPMAFAIFGALAVLALWAIGPILGDRRPSVRPVPPLAPLARLMDDTNTLGAWVIAAFVTTQV ALALGHPALADWLVFAAPLLPLIGVAFGLLPGVGPQILVATLVVGGGTPVSMLIATVLAAGLSVGAPSTTTARLVPLGLG LLGGYGAYALGW
Sequences:
>Translated_332_residues MTTLVLNSWKTAREIKGASRFPWQLGVLAVAIALVLSEGPAGDAARQALADAFLTVVPLVALAVAFGMALTRRLPMAGRL ALPAWPIPLAALVLLVPFPRAAAVVLALGVAAGLGGAFLSHLSAATAPRTDRPLERPWPGVVVALWAVMLLGGLALTLAS ALGFAVGEGGRFGLSSLGLPMAFAIFGALAVLALWAIGPILGDRRPSVRPVPPLAPLARLMDDTNTLGAWVIAAFVTTQV ALALGHPALADWLVFAAPLLPLIGVAFGLLPGVGPQILVATLVVGGGTPVSMLIATVLAAGLSVGAPSTTTARLVPLGLG LLGGYGAYALGW >Mature_331_residues TTLVLNSWKTAREIKGASRFPWQLGVLAVAIALVLSEGPAGDAARQALADAFLTVVPLVALAVAFGMALTRRLPMAGRLA LPAWPIPLAALVLLVPFPRAAAVVLALGVAAGLGGAFLSHLSAATAPRTDRPLERPWPGVVVALWAVMLLGGLALTLASA LGFAVGEGGRFGLSSLGLPMAFAIFGALAVLALWAIGPILGDRRPSVRPVPPLAPLARLMDDTNTLGAWVIAAFVTTQVA LALGHPALADWLVFAAPLLPLIGVAFGLLPGVGPQILVATLVVGGGTPVSMLIATVLAAGLSVGAPSTTTARLVPLGLGL LGGYGAYALGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33532; Mature: 33400
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLVLNSWKTAREIKGASRFPWQLGVLAVAIALVLSEGPAGDAARQALADAFLTVVPLV CCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ALAVAFGMALTRRLPMAGRLALPAWPIPLAALVLLVPFPRAAAVVLALGVAAGLGGAFLS HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HLSAATAPRTDRPLERPWPGVVVALWAVMLLGGLALTLASALGFAVGEGGRFGLSSLGLP HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHH MAFAIFGALAVLALWAIGPILGDRRPSVRPVPPLAPLARLMDDTNTLGAWVIAAFVTTQV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ALALGHPALADWLVFAAPLLPLIGVAFGLLPGVGPQILVATLVVGGGTPVSMLIATVLAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH GLSVGAPSTTTARLVPLGLGLLGGYGAYALGW HHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure TTLVLNSWKTAREIKGASRFPWQLGVLAVAIALVLSEGPAGDAARQALADAFLTVVPLV CEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ALAVAFGMALTRRLPMAGRLALPAWPIPLAALVLLVPFPRAAAVVLALGVAAGLGGAFLS HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HLSAATAPRTDRPLERPWPGVVVALWAVMLLGGLALTLASALGFAVGEGGRFGLSSLGLP HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHH MAFAIFGALAVLALWAIGPILGDRRPSVRPVPPLAPLARLMDDTNTLGAWVIAAFVTTQV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ALALGHPALADWLVFAAPLLPLIGVAFGLLPGVGPQILVATLVVGGGTPVSMLIATVLAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH GLSVGAPSTTTARLVPLGLGLLGGYGAYALGW HHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA