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The map label for this gene is ygbL [C]

Identifier: 83594473

GI number: 83594473

Start: 3626603

End: 3627232

Strand: Direct

Name: ygbL [C]

Synonym: Rru_A3143

Alternate gene names: 83594473

Gene position: 3626603-3627232 (Clockwise)

Preceding gene: 83594472

Following gene: 83594475

Centisome position: 83.32

GC content: 67.94

Gene sequence:

>630_bases
ATGGATGAAGCCCTATTGCGCGACCAGATGGTCGCCCTTGCCCGCAGTTTGTTCGAGCGCGGCTTTTCGGTGGGAAGTGC
GGGCAATATCAGCGCCCGCACCGCCGACGGCGGCTATTTGATCACCCCGACCAATTCCAGCCTGGGCCGCTTGGCCGCCG
GGCGGCTGTCAAAGCTCGATAGCGCCTTCCGCCCCGTCAGCGGCGACCCGCCGTCCAAGGAGGTGGTCATGCACCGCGCC
TTCTATGAGGGCCGCCCCGAAGCCGGCGCCGTGGTTCATCTGCATTCGACCATGGCGACGGCGATCGCCTGTCTGGCCGA
GGCCGATGCCAACCAGCCGATCGCCGCCCTGACCCCTTACTTCTTCATGCGCATCGGCGCCCGCCTGCCGGTCATTCCCT
ATTTCCGCCCCGGCGATCCGGCGATGGAAGCCGCCATCTGCGCCGAGGCCCCGACCGCCCGGGCCGTCTTGCTGTCCAAC
CATGGACCGGTGGTCTCAGCCGCCACCCTGGTCGATGCCGTCAATGCCGCCGAGGAACTGGAAGAGGCGGCGAAGCTTGC
CCTGCTGCTGGCCGGCAAGCCCGTTCGCACCCTGACCCCCGATCAGGTCGCCGCCCTGCTTCCGCACTAG

Upstream 100 bases:

>100_bases
CCCGCTGCGCCTTGCCCTAAAATCGGGGAACTTCGGTAGCGCCACCTTCTTTCTTGAAGCCCTTGGGCTGCCCCTTTAAC
CGCAGCGGAAAATCACAGCG

Downstream 100 bases:

>100_bases
GGAATGGCTTAGGCCAGCCGTCGGCGCGGGCGACGGGTGATCAGCCAATCCAGGCCCAGCATCACCAGCAAGCTGAGCCC
GGTCAGCGGAAAGGCGAGGC

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDEALLRDQMVALARSLFERGFSVGSAGNISARTADGGYLITPTNSSLGRLAAGRLSKLDSAFRPVSGDPPSKEVVMHRA
FYEGRPEAGAVVHLHSTMATAIACLAEADANQPIAALTPYFFMRIGARLPVIPYFRPGDPAMEAAICAEAPTARAVLLSN
HGPVVSAATLVDAVNAAEELEEAAKLALLLAGKPVRTLTPDQVAALLPH

Sequences:

>Translated_209_residues
MDEALLRDQMVALARSLFERGFSVGSAGNISARTADGGYLITPTNSSLGRLAAGRLSKLDSAFRPVSGDPPSKEVVMHRA
FYEGRPEAGAVVHLHSTMATAIACLAEADANQPIAALTPYFFMRIGARLPVIPYFRPGDPAMEAAICAEAPTARAVLLSN
HGPVVSAATLVDAVNAAEELEEAAKLALLLAGKPVRTLTPDQVAALLPH
>Mature_209_residues
MDEALLRDQMVALARSLFERGFSVGSAGNISARTADGGYLITPTNSSLGRLAAGRLSKLDSAFRPVSGDPPSKEVVMHRA
FYEGRPEAGAVVHLHSTMATAIACLAEADANQPIAALTPYFFMRIGARLPVIPYFRPGDPAMEAAICAEAPTARAVLLSN
HGPVVSAATLVDAVNAAEELEEAAKLALLLAGKPVRTLTPDQVAALLPH

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=204, Percent_Identity=47.0588235294118, Blast_Score=188, Evalue=2e-49,
Organism=Escherichia coli, GI1789164, Length=209, Percent_Identity=30.622009569378, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 21882; Mature: 21882

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEALLRDQMVALARSLFERGFSVGSAGNISARTADGGYLITPTNSSLGRLAAGRLSKLD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHH
SAFRPVSGDPPSKEVVMHRAFYEGRPEAGAVVHLHSTMATAIACLAEADANQPIAALTPY
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHH
FFMRIGARLPVIPYFRPGDPAMEAAICAEAPTARAVLLSNHGPVVSAATLVDAVNAAEEL
HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
EEAAKLALLLAGKPVRTLTPDQVAALLPH
HHHHHHHHHHCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MDEALLRDQMVALARSLFERGFSVGSAGNISARTADGGYLITPTNSSLGRLAAGRLSKLD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHH
SAFRPVSGDPPSKEVVMHRAFYEGRPEAGAVVHLHSTMATAIACLAEADANQPIAALTPY
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHH
FFMRIGARLPVIPYFRPGDPAMEAAICAEAPTARAVLLSNHGPVVSAATLVDAVNAAEEL
HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
EEAAKLALLLAGKPVRTLTPDQVAALLPH
HHHHHHHHHHCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]