| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594455
Identifier: 83594455
GI number: 83594455
Start: 3603996
End: 3605216
Strand: Reverse
Name: 83594455
Synonym: Rru_A3125
Alternate gene names: NA
Gene position: 3605216-3603996 (Counterclockwise)
Preceding gene: 83594457
Following gene: 83594447
Centisome position: 82.82
GC content: 69.78
Gene sequence:
>1221_bases TTGCCTTGTGCGAGGCGGAGGCCTCGCCGACACTCCGCCGGTCACAGACGTGGCGCCCGCCGCGCGCTGGGCGTCGAGGA GGACAAGATGGCCGGACTCTCCCGCGATCGGCGCAAGATACTGCACGTTTTTCCGTCCTTCGAGGTCGGGGGAGCGCAAA TCCGCTTCAGCCGGATCATAGCCGGGCTGGGCGAGGACTTCGAGCATGGGGTTATCGCGCTTAACGGCAACAGCGAGACC CTGTCGCGCCTGCCCGCCGGCGCGCCGGTGCGGCTGCTGGCGCTGGACTATGACACCAAGGGCGGTGTAGGCCGCTTATG GCGGTTCCGCAAAACCCTGGCCAGCGAGCGCCCCGATCTGCTGGTGACCTATAACTGGGGGGCCATCGAATGGGGCTTGG TCAACCTGCTCGCCCCCTTGTGCCCCCATGTCGATATCGAGGACGGCTTCGGCCCCGACGAGGCGGCCGGGCAATTGCCC CGGCGGGTGGCGCTGCGCCGCTTGGTCTATGGCCGGGCGCAGCGGGTGATCGTGCCCTCGCGGGTGCTTGAGCGACTGGC CCGCGATCGCTGGAAGGTGCCGGTCGAGCGGCTGTGCTACCTGCCCAATGGCGTGCCGGTGGACAGCTTCGGCGCCCCGC CCGAGGCGTCGCTGGTGGCGCGGCTGGGCATCGATCGCGACCAGCCGGTGATCGGCACCCTGGCCTCGCTGCGGCCCGAA AAGAACCTGTCGCGGTTGATCGAGGCTTTCCGGCTGGCGGTCTGCCAGCCCGGCCGGCCCGGGCAACTGGTGATCATCGG CGATGGGGTTGAACGGCCGGCCCTGGAAGCCCAGGCGGCGGCCGCCGATCTGGGCGCGCGGGTGATTTTTACCGGCGCGC TGGACCGCCCGGCCCGGCTGCTGGGCGCGCTGTCCCATTACGCCTTGTCGTCGGACACCGAGCAGATGCCGCTGAGCTTG ATCGAGGCGATGGCCGCCGGTCTGCCGGTGGCGGCCACCGATGTCGGCGATGTCGCCGAGATGGTCGCCCCGTCCAACCA CCCCTTCGTCGTCGGCCGCTCCACCGAGGATCTGGCCCGCTCGCTGGCCGGGCTGCTTGAGGATGCCGAACGGGCCAAAG CCATCGGCGCCGAGAACCGCGCCCGCGCTTTCGCGCTGTTTGGCGAGGACAAGATGATCGAGGCCTATCGCCGGGTGTTT CGCGGGCAAGCGCCCGATTAG
Upstream 100 bases:
>100_bases CCGACGTTCAATGCGGCGCCGAAGCGCTCGTTGAAGGCGGCGAAGGACGAAAGCTTGATCAGGCTCATCGCCCGCTCCGC CGGGCGGGGGGCGGCGTCTT
Downstream 100 bases:
>100_bases GGCTCTGGCGGCAGGGCTTTGAGCCACTGGGTGGTGATCTCGCGCAACCGCTGTTCATGGCGCGGGTCGGAAAAGGTGTG ATCGGCCCCGGGGAGAGAGG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; WalR Protein; Glycogen Synthase; Sugar Transferase; Group Glycosyltransferase; Group 1 Family Glycosyl Transferase; 1 2-Diacylglycerol 3-Glucosyltransferase; Galactosyltransferase; Second Mannosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Hexosyltransferase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MPCARRRPRRHSAGHRRGARRALGVEEDKMAGLSRDRRKILHVFPSFEVGGAQIRFSRIIAGLGEDFEHGVIALNGNSET LSRLPAGAPVRLLALDYDTKGGVGRLWRFRKTLASERPDLLVTYNWGAIEWGLVNLLAPLCPHVDIEDGFGPDEAAGQLP RRVALRRLVYGRAQRVIVPSRVLERLARDRWKVPVERLCYLPNGVPVDSFGAPPEASLVARLGIDRDQPVIGTLASLRPE KNLSRLIEAFRLAVCQPGRPGQLVIIGDGVERPALEAQAAAADLGARVIFTGALDRPARLLGALSHYALSSDTEQMPLSL IEAMAAGLPVAATDVGDVAEMVAPSNHPFVVGRSTEDLARSLAGLLEDAERAKAIGAENRARAFALFGEDKMIEAYRRVF RGQAPD
Sequences:
>Translated_406_residues MPCARRRPRRHSAGHRRGARRALGVEEDKMAGLSRDRRKILHVFPSFEVGGAQIRFSRIIAGLGEDFEHGVIALNGNSET LSRLPAGAPVRLLALDYDTKGGVGRLWRFRKTLASERPDLLVTYNWGAIEWGLVNLLAPLCPHVDIEDGFGPDEAAGQLP RRVALRRLVYGRAQRVIVPSRVLERLARDRWKVPVERLCYLPNGVPVDSFGAPPEASLVARLGIDRDQPVIGTLASLRPE KNLSRLIEAFRLAVCQPGRPGQLVIIGDGVERPALEAQAAAADLGARVIFTGALDRPARLLGALSHYALSSDTEQMPLSL IEAMAAGLPVAATDVGDVAEMVAPSNHPFVVGRSTEDLARSLAGLLEDAERAKAIGAENRARAFALFGEDKMIEAYRRVF RGQAPD >Mature_405_residues PCARRRPRRHSAGHRRGARRALGVEEDKMAGLSRDRRKILHVFPSFEVGGAQIRFSRIIAGLGEDFEHGVIALNGNSETL SRLPAGAPVRLLALDYDTKGGVGRLWRFRKTLASERPDLLVTYNWGAIEWGLVNLLAPLCPHVDIEDGFGPDEAAGQLPR RVALRRLVYGRAQRVIVPSRVLERLARDRWKVPVERLCYLPNGVPVDSFGAPPEASLVARLGIDRDQPVIGTLASLRPEK NLSRLIEAFRLAVCQPGRPGQLVIIGDGVERPALEAQAAAADLGARVIFTGALDRPARLLGALSHYALSSDTEQMPLSLI EAMAAGLPVAATDVGDVAEMVAPSNHPFVVGRSTEDLARSLAGLLEDAERAKAIGAENRARAFALFGEDKMIEAYRRVFR GQAPD
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44185; Mature: 44054
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCARRRPRRHSAGHRRGARRALGVEEDKMAGLSRDRRKILHVFPSFEVGGAQIRFSRII CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH AGLGEDFEHGVIALNGNSETLSRLPAGAPVRLLALDYDTKGGVGRLWRFRKTLASERPDL HHCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCE LVTYNWGAIEWGLVNLLAPLCPHVDIEDGFGPDEAAGQLPRRVALRRLVYGRAQRVIVPS EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECHH RVLERLARDRWKVPVERLCYLPNGVPVDSFGAPPEASLVARLGIDRDQPVIGTLASLRPE HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCC KNLSRLIEAFRLAVCQPGRPGQLVIIGDGVERPALEAQAAAADLGARVIFTGALDRPARL HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH LGALSHYALSSDTEQMPLSLIEAMAAGLPVAATDVGDVAEMVAPSNHPFVVGRSTEDLAR HHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEECCHHHHHH SLAGLLEDAERAKAIGAENRARAFALFGEDKMIEAYRRVFRGQAPD HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PCARRRPRRHSAGHRRGARRALGVEEDKMAGLSRDRRKILHVFPSFEVGGAQIRFSRII CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH AGLGEDFEHGVIALNGNSETLSRLPAGAPVRLLALDYDTKGGVGRLWRFRKTLASERPDL HHCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCE LVTYNWGAIEWGLVNLLAPLCPHVDIEDGFGPDEAAGQLPRRVALRRLVYGRAQRVIVPS EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECHH RVLERLARDRWKVPVERLCYLPNGVPVDSFGAPPEASLVARLGIDRDQPVIGTLASLRPE HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCC KNLSRLIEAFRLAVCQPGRPGQLVIIGDGVERPALEAQAAAADLGARVIFTGALDRPARL HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH LGALSHYALSSDTEQMPLSLIEAMAAGLPVAATDVGDVAEMVAPSNHPFVVGRSTEDLAR HHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEECCHHHHHH SLAGLLEDAERAKAIGAENRARAFALFGEDKMIEAYRRVFRGQAPD HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA