| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594435
Identifier: 83594435
GI number: 83594435
Start: 3575460
End: 3576659
Strand: Direct
Name: 83594435
Synonym: Rru_A3105
Alternate gene names: NA
Gene position: 3575460-3576659 (Clockwise)
Preceding gene: 83594434
Following gene: 83594437
Centisome position: 82.14
GC content: 68.17
Gene sequence:
>1200_bases ATGGCCGATATTCTTTTCCTGTGCCAGCGCATCCCCTTCCCTCCCACAAAGGGGGACAAGATCCGCTCGTTCCATATTCT TGACCATCTCGCGCGCCGCCACCGCATTCACCTTGGCACCTTCGTCGACGATCCCGAAGATCGCGGCTTCGAGGCCGATC TGAAACGCTATTGCGCCGATGCCCTGGTGCTGCCCTTGGATCGCCGGGTGGCGACGGGGCGGGCGCTTTTGGCGCTGCCC AGCGCCACCCCGCTCAGCATCGCCTTTTACCGCGATCGCCGCATGCAGCGCTGGGTCGACGGGGTGCTGGCCCGCCGCCC GGCGGCGGCCTTCCTGTTTTCCTCGGCGATGGCCCAATATGTGGTCGGTCATCCCGCCGCCCCGCCCCGGGTGGTGATGG ACTTCGTCGATGTCGATTCCGAGAAATGGGCGGCCTATGCCCGCGATCGCCAGGGGCCACGGCGCTGGGTCTATGCCCGC GAGGCCAAACGCCTGCTCGCGTACGACCGCCAGATCGCCGCGCGGGTCGATGCCTCGCTGTTCGTTTCGCAAGCCGAGGC CGATCTGTTTGGCACGCTGGCGCCCGAAAGCGCCGGGCGCATCCACCCCCTGTCCAACGGCATCGATACCGTTTTCTTCG ATCCGACCCTGACCTATGCCGATCCCTATTCCCCGGGCAAACCGGTGCTGGTTTTCACCGGAGCGATGGATTACGAGCCC AACGTCAAGGCGGTTTGCTGGTTCGCCTCCCAGGTCCTGCCGCTGGTCCGCGCCGCCCGGCCGGCCGCCGAATTCTGGAT CGTCGGCGCCAATCCCGCGTCGGCGGTGCGCGCCCTCGACCGCCATCCCGGGGTCACGGTCACCGGCCGCGTCGCCGATA TCCGCCCCTATCTCGCCCATGCCGATGTGGCCGTCGCCCCGATGTTCCTCGGCCGGGGCATTCAGAACAAGGTTCTGGAA GCCATGGCGATGGCCCGGCCGACGGTGGTTTCGGCCGAAGCGGTGGAAGGGATCGGCGCGGGCGATGGCGCCGAGCTTCT GGTCGCCCCGCTTTCACCCCGGGGCTTCGCCGATGCCACGCTTGAGGCCCTGGCCCCCGGAGCCGCCGCCCTCGGCCAGC GGGCGCGGCGCTATCTGCTTGATGCTTTCGCCTGGGAGCGGACCATCGCCCCCTTGGGCGCCTGTCTTGGCCTGCCGTGA
Upstream 100 bases:
>100_bases CGGCATCAGCCGACCGACTTTATACGACTTGATCGAGACCCATAACATTCACGTTTAATGACCCCGGGACATCAGGCCGG GACATCAGGACTGTTCAGTG
Downstream 100 bases:
>100_bases TGGCGCCCCCCCGTCGATGGAGGCTCGCCGGTCTAGCTCCGCCGCATCAGCTTCTGCAAAAGAACGCGGACAAAAACACC GACCAGCGCGCCCGTTCCAT
Product: glycosyl transferases group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Sugar Transferase; A-Glycosyltransferase; Mannosyl Transferase WbaD; Glycosyl Transferase Protein; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Polysaccharide Biosynthesis Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MADILFLCQRIPFPPTKGDKIRSFHILDHLARRHRIHLGTFVDDPEDRGFEADLKRYCADALVLPLDRRVATGRALLALP SATPLSIAFYRDRRMQRWVDGVLARRPAAAFLFSSAMAQYVVGHPAAPPRVVMDFVDVDSEKWAAYARDRQGPRRWVYAR EAKRLLAYDRQIAARVDASLFVSQAEADLFGTLAPESAGRIHPLSNGIDTVFFDPTLTYADPYSPGKPVLVFTGAMDYEP NVKAVCWFASQVLPLVRAARPAAEFWIVGANPASAVRALDRHPGVTVTGRVADIRPYLAHADVAVAPMFLGRGIQNKVLE AMAMARPTVVSAEAVEGIGAGDGAELLVAPLSPRGFADATLEALAPGAAALGQRARRYLLDAFAWERTIAPLGACLGLP
Sequences:
>Translated_399_residues MADILFLCQRIPFPPTKGDKIRSFHILDHLARRHRIHLGTFVDDPEDRGFEADLKRYCADALVLPLDRRVATGRALLALP SATPLSIAFYRDRRMQRWVDGVLARRPAAAFLFSSAMAQYVVGHPAAPPRVVMDFVDVDSEKWAAYARDRQGPRRWVYAR EAKRLLAYDRQIAARVDASLFVSQAEADLFGTLAPESAGRIHPLSNGIDTVFFDPTLTYADPYSPGKPVLVFTGAMDYEP NVKAVCWFASQVLPLVRAARPAAEFWIVGANPASAVRALDRHPGVTVTGRVADIRPYLAHADVAVAPMFLGRGIQNKVLE AMAMARPTVVSAEAVEGIGAGDGAELLVAPLSPRGFADATLEALAPGAAALGQRARRYLLDAFAWERTIAPLGACLGLP >Mature_398_residues ADILFLCQRIPFPPTKGDKIRSFHILDHLARRHRIHLGTFVDDPEDRGFEADLKRYCADALVLPLDRRVATGRALLALPS ATPLSIAFYRDRRMQRWVDGVLARRPAAAFLFSSAMAQYVVGHPAAPPRVVMDFVDVDSEKWAAYARDRQGPRRWVYARE AKRLLAYDRQIAARVDASLFVSQAEADLFGTLAPESAGRIHPLSNGIDTVFFDPTLTYADPYSPGKPVLVFTGAMDYEPN VKAVCWFASQVLPLVRAARPAAEFWIVGANPASAVRALDRHPGVTVTGRVADIRPYLAHADVAVAPMFLGRGIQNKVLEA MAMARPTVVSAEAVEGIGAGDGAELLVAPLSPRGFADATLEALAPGAAALGQRARRYLLDAFAWERTIAPLGACLGLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43474; Mature: 43342
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADILFLCQRIPFPPTKGDKIRSFHILDHLARRHRIHLGTFVDDPEDRGFEADLKRYCAD CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHH ALVLPLDRRVATGRALLALPSATPLSIAFYRDRRMQRWVDGVLARRPAAAFLFSSAMAQY HHCCCCCCHHHCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VVGHPAAPPRVVMDFVDVDSEKWAAYARDRQGPRRWVYAREAKRLLAYDRQIAARVDASL HHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSQAEADLFGTLAPESAGRIHPLSNGIDTVFFDPTLTYADPYSPGKPVLVFTGAMDYEP HHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCCEEEEECCCCCCC NVKAVCWFASQVLPLVRAARPAAEFWIVGANPASAVRALDRHPGVTVTGRVADIRPYLAH CCCEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEHHHCCHHHHH ADVAVAPMFLGRGIQNKVLEAMAMARPTVVSAEAVEGIGAGDGAELLVAPLSPRGFADAT CCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCEEEEEECCCCCCHHHH LEALAPGAAALGQRARRYLLDAFAWERTIAPLGACLGLP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADILFLCQRIPFPPTKGDKIRSFHILDHLARRHRIHLGTFVDDPEDRGFEADLKRYCAD CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHH ALVLPLDRRVATGRALLALPSATPLSIAFYRDRRMQRWVDGVLARRPAAAFLFSSAMAQY HHCCCCCCHHHCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VVGHPAAPPRVVMDFVDVDSEKWAAYARDRQGPRRWVYAREAKRLLAYDRQIAARVDASL HHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSQAEADLFGTLAPESAGRIHPLSNGIDTVFFDPTLTYADPYSPGKPVLVFTGAMDYEP HHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCCEEEEECCCCCCC NVKAVCWFASQVLPLVRAARPAAEFWIVGANPASAVRALDRHPGVTVTGRVADIRPYLAH CCCEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEHHHCCHHHHH ADVAVAPMFLGRGIQNKVLEAMAMARPTVVSAEAVEGIGAGDGAELLVAPLSPRGFADAT CCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCEEEEEECCCCCCHHHH LEALAPGAAALGQRARRYLLDAFAWERTIAPLGACLGLP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA