| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594431
Identifier: 83594431
GI number: 83594431
Start: 3569188
End: 3570336
Strand: Direct
Name: 83594431
Synonym: Rru_A3101
Alternate gene names: NA
Gene position: 3569188-3570336 (Clockwise)
Preceding gene: 83594430
Following gene: 83594432
Centisome position: 82.0
GC content: 65.27
Gene sequence:
>1149_bases ATGACCGCGATGCCCCCCTTGCTTTCGCCGCTTCCCACCACGCCGTCGCGCCTGCTGCCCGCGCTTCTTGACGACCCGCG CCGGGCGGGCGAGCTTGATGGCGCCACCTGGGACCGGCTGATTCCCTTGGCCCGCCACGCCGGAGTCCTGGGCCGCCTGG GGTATCTGATCGATGCCGCCGGCCTGACCCCGGCTTTGCCGGCGGCGCCGGCGCGCCATCTGCGTAGCGCCCTGCTCCTT GCCCAACGCCATCAGCGCGAGGTGCATTTCGAGATCACCGAGCTGGCCGCGGCGCTGCGGCCGCTGGGCGTTCCGCTGGT CCTGCTCAAAGGTGCTGCCTATGTGCAGGCCGCCCTGCCGGCGGGCTGGGGCCGCACGTTCCAGGATATCGATTTCTGCG TACCGCGCGCCCGCCTCGCCGAGGTCGAAAACGCCCTGATCATCGCCGGCTGGCATCCAACGGAAAAAAACGCCTATGAC CGGGGCTATTACCGCCGCTGGATGCACGAGATCCCACCGCTCCGCCACGCCGTTCGCGGCACGGTCATCGATGTCCACCA CGCGCTGACCCCTTTGACGGCGCGCCGCCCGGTCGACGCCGCCGCCCTGATGGCCCGCGCCCGGCCCACGGCGATTGACG GCGTTCGCCACCCCACCCTTGCCGATCTCGTGGTCCACAGCGCCGTTCACCTGTTTGACGGCGGCGAATTCGACCGGGCA CTGCGCGATCTCTCTGATATCGCCTTGCTTCTCGGCGAGGGGCGACGGGGCGATCGGGGCTGGCTGGAGACCCTGGCCGA GGTCGCCCGCGCCAGCGGAGTCGAAAAACCTGTAGCCCATGCGCTGTTTCACGCTGCCCGGTTGTTCCCTCTCACCGTCG GCCCCCTCGATACGCGTGCTGCGTCGCCGCAGAAAAGGCCGATCCTCGACGGCATTCTGACCCAGACATTTTGGCCGAAC CTGCCCGCCGATCAACCTATAGGCGCCCGTCTGGGCAATGCCTTTCTTTATATCCGAGGCCATGCCCTGAGGATGCCGCC CCTTCTTCTGGCGTATCATTTCGCTACCAAAATTTCTTTTCGTATAAATATTTCCTTAAGCAAAAATCGACTTAGAGAAA ACTTACCAAAGGCTAATAAAGACGTCTGA
Upstream 100 bases:
>100_bases ACCGGTTGGCCGATGTCGTCGGCGGCTGCGCCTGCTTTGACCTCGCCTATGGCGATCTCGATGAGGCCCTGGAGCGGCTG GCCGGTCTGGCGGTGACCCG
Downstream 100 bases:
>100_bases AACAAAACAAAGATTCCAATCCCTTTCTTAAGCGGAACTATAAAATAAATAGTGTTTTCTCTGAGCATTCTCTCCTATAT CATGCGGCAAATCGACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTAMPPLLSPLPTTPSRLLPALLDDPRRAGELDGATWDRLIPLARHAGVLGRLGYLIDAAGLTPALPAAPARHLRSALLL AQRHQREVHFEITELAAALRPLGVPLVLLKGAAYVQAALPAGWGRTFQDIDFCVPRARLAEVENALIIAGWHPTEKNAYD RGYYRRWMHEIPPLRHAVRGTVIDVHHALTPLTARRPVDAAALMARARPTAIDGVRHPTLADLVVHSAVHLFDGGEFDRA LRDLSDIALLLGEGRRGDRGWLETLAEVARASGVEKPVAHALFHAARLFPLTVGPLDTRAASPQKRPILDGILTQTFWPN LPADQPIGARLGNAFLYIRGHALRMPPLLLAYHFATKISFRINISLSKNRLRENLPKANKDV
Sequences:
>Translated_382_residues MTAMPPLLSPLPTTPSRLLPALLDDPRRAGELDGATWDRLIPLARHAGVLGRLGYLIDAAGLTPALPAAPARHLRSALLL AQRHQREVHFEITELAAALRPLGVPLVLLKGAAYVQAALPAGWGRTFQDIDFCVPRARLAEVENALIIAGWHPTEKNAYD RGYYRRWMHEIPPLRHAVRGTVIDVHHALTPLTARRPVDAAALMARARPTAIDGVRHPTLADLVVHSAVHLFDGGEFDRA LRDLSDIALLLGEGRRGDRGWLETLAEVARASGVEKPVAHALFHAARLFPLTVGPLDTRAASPQKRPILDGILTQTFWPN LPADQPIGARLGNAFLYIRGHALRMPPLLLAYHFATKISFRINISLSKNRLRENLPKANKDV >Mature_381_residues TAMPPLLSPLPTTPSRLLPALLDDPRRAGELDGATWDRLIPLARHAGVLGRLGYLIDAAGLTPALPAAPARHLRSALLLA QRHQREVHFEITELAAALRPLGVPLVLLKGAAYVQAALPAGWGRTFQDIDFCVPRARLAEVENALIIAGWHPTEKNAYDR GYYRRWMHEIPPLRHAVRGTVIDVHHALTPLTARRPVDAAALMARARPTAIDGVRHPTLADLVVHSAVHLFDGGEFDRAL RDLSDIALLLGEGRRGDRGWLETLAEVARASGVEKPVAHALFHAARLFPLTVGPLDTRAASPQKRPILDGILTQTFWPNL PADQPIGARLGNAFLYIRGHALRMPPLLLAYHFATKISFRINISLSKNRLRENLPKANKDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41931; Mature: 41800
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMPPLLSPLPTTPSRLLPALLDDPRRAGELDGATWDRLIPLARHAGVLGRLGYLIDAA CCCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GLTPALPAAPARHLRSALLLAQRHQREVHFEITELAAALRPLGVPLVLLKGAAYVQAALP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCC AGWGRTFQDIDFCVPRARLAEVENALIIAGWHPTEKNAYDRGYYRRWMHEIPPLRHAVRG CCCCCCHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHC TVIDVHHALTPLTARRPVDAAALMARARPTAIDGVRHPTLADLVVHSAVHLFDGGEFDRA CCEEHHHHHCCHHCCCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH LRDLSDIALLLGEGRRGDRGWLETLAEVARASGVEKPVAHALFHAARLFPLTVGPLDTRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCC ASPQKRPILDGILTQTFWPNLPADQPIGARLGNAFLYIRGHALRMPPLLLAYHFATKISF CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHEEEE RINISLSKNRLRENLPKANKDV EEEEEECHHHHHHHCCCCCCCC >Mature Secondary Structure TAMPPLLSPLPTTPSRLLPALLDDPRRAGELDGATWDRLIPLARHAGVLGRLGYLIDAA CCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GLTPALPAAPARHLRSALLLAQRHQREVHFEITELAAALRPLGVPLVLLKGAAYVQAALP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCC AGWGRTFQDIDFCVPRARLAEVENALIIAGWHPTEKNAYDRGYYRRWMHEIPPLRHAVRG CCCCCCHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHC TVIDVHHALTPLTARRPVDAAALMARARPTAIDGVRHPTLADLVVHSAVHLFDGGEFDRA CCEEHHHHHCCHHCCCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH LRDLSDIALLLGEGRRGDRGWLETLAEVARASGVEKPVAHALFHAARLFPLTVGPLDTRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCC ASPQKRPILDGILTQTFWPNLPADQPIGARLGNAFLYIRGHALRMPPLLLAYHFATKISF CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHEEEE RINISLSKNRLRENLPKANKDV EEEEEECHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA