| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594428
Identifier: 83594428
GI number: 83594428
Start: 3567256
End: 3567927
Strand: Direct
Name: 83594428
Synonym: Rru_A3098
Alternate gene names: NA
Gene position: 3567256-3567927 (Clockwise)
Preceding gene: 83594427
Following gene: 83594429
Centisome position: 81.95
GC content: 68.3
Gene sequence:
>672_bases ATGACCGACATCACGCCCCCATCCTTCGAAGCGACCGGCTTGCCGCCGACCGCCTCCGATCCGCCCGGCGGCCTTGACGC CGCCACCCCGACCACCGTCCCGCCGGGCGCCGGCGCCCTATCGCGCCGACGCTTCGTCGGCGTCGCCCTGGCTGTTCCAC CACTGGTCGCCACCCTGTCCAACCGGCCGGCGATGGCCCAAAGCCCCGGTGGCCCGGCCTGCACGCCTTCGGCCTATGGG TCGATCACCGCGCCGGGGGGAACCTCGCTCGATCACAGCGACCAATGCGTGGGCGGAGCCTCGCCGCGTCAGTTGGGGCA GTCGATTCGCCGCGAGGGCCGCTCGGTCTATGACGGCTATGTTTTCGCCAGCCTGCTCGGCACCACCTGGGGGGATGGCA AAAAAGACTGGGACCGCACCGTCACCTTCACCGATGTTCTGACCGGCAAGGTCGGCGACCGCTATGATTTCGGCAAGGCG CTTTGCGCCGCCTATCTCAACATCGAACGCGGCACCATCACCTTGCCGCTGGGCGAGTTGCGGACGATGGCCGGCGCCTT CAGCCATCGCAGTTCGCCCCATCGCCGGGGTTATTTCCTGCGCTCGACCGGCCAGTCGTGGAGCTTGGCCGAGGTCAAGG AGTTCCTCGACAACACCTATCGGCGGGGGTGA
Upstream 100 bases:
>100_bases AGGCCCGGGCGCTTTTATCCGAGTTGCAGGGATGACGTTCCCGCGGAACGGGCGTCATAATGCCTTTCTGTCGATCCTTC TGCGATAAAGCGGAGCACCC
Downstream 100 bases:
>100_bases CGACGCCCGTGGCGGAAGACAGCCCCGGCCCCCTCGACCAGAGGGTCCGCCGTCGCGCCGATCTGTCGTGGCGGATCTGG CCCGATGGGGCGGTGGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTDITPPSFEATGLPPTASDPPGGLDAATPTTVPPGAGALSRRRFVGVALAVPPLVATLSNRPAMAQSPGGPACTPSAYG SITAPGGTSLDHSDQCVGGASPRQLGQSIRREGRSVYDGYVFASLLGTTWGDGKKDWDRTVTFTDVLTGKVGDRYDFGKA LCAAYLNIERGTITLPLGELRTMAGAFSHRSSPHRRGYFLRSTGQSWSLAEVKEFLDNTYRRG
Sequences:
>Translated_223_residues MTDITPPSFEATGLPPTASDPPGGLDAATPTTVPPGAGALSRRRFVGVALAVPPLVATLSNRPAMAQSPGGPACTPSAYG SITAPGGTSLDHSDQCVGGASPRQLGQSIRREGRSVYDGYVFASLLGTTWGDGKKDWDRTVTFTDVLTGKVGDRYDFGKA LCAAYLNIERGTITLPLGELRTMAGAFSHRSSPHRRGYFLRSTGQSWSLAEVKEFLDNTYRRG >Mature_222_residues TDITPPSFEATGLPPTASDPPGGLDAATPTTVPPGAGALSRRRFVGVALAVPPLVATLSNRPAMAQSPGGPACTPSAYGS ITAPGGTSLDHSDQCVGGASPRQLGQSIRREGRSVYDGYVFASLLGTTWGDGKKDWDRTVTFTDVLTGKVGDRYDFGKAL CAAYLNIERGTITLPLGELRTMAGAFSHRSSPHRRGYFLRSTGQSWSLAEVKEFLDNTYRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23508; Mature: 23376
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITPPSFEATGLPPTASDPPGGLDAATPTTVPPGAGALSRRRFVGVALAVPPLVATLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NRPAMAQSPGGPACTPSAYGSITAPGGTSLDHSDQCVGGASPRQLGQSIRREGRSVYDGY CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH VFASLLGTTWGDGKKDWDRTVTFTDVLTGKVGDRYDFGKALCAAYLNIERGTITLPLGEL HHHHHHHCCCCCCCCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECHHHH RTMAGAFSHRSSPHRRGYFLRSTGQSWSLAEVKEFLDNTYRRG HHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TDITPPSFEATGLPPTASDPPGGLDAATPTTVPPGAGALSRRRFVGVALAVPPLVATLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NRPAMAQSPGGPACTPSAYGSITAPGGTSLDHSDQCVGGASPRQLGQSIRREGRSVYDGY CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH VFASLLGTTWGDGKKDWDRTVTFTDVLTGKVGDRYDFGKALCAAYLNIERGTITLPLGEL HHHHHHHCCCCCCCCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECHHHH RTMAGAFSHRSSPHRRGYFLRSTGQSWSLAEVKEFLDNTYRRG HHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA