| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594427
Identifier: 83594427
GI number: 83594427
Start: 3564389
End: 3567190
Strand: Direct
Name: 83594427
Synonym: Rru_A3097
Alternate gene names: NA
Gene position: 3564389-3567190 (Clockwise)
Preceding gene: 83594426
Following gene: 83594428
Centisome position: 81.89
GC content: 66.63
Gene sequence:
>2802_bases ATGGCACGGTCACTGAAACGGTTCTGGTCGACGACAAGCGCCCTCGCCCTGGTCCTGGCGCTCGCCGCCTGCAACGACGA GGCCAAAGACAAGGCGCGGGCCTCGGCCAAGGCCTATGACAGCGCTATCACCGCTTGGCGGGCCGGCGACCAGAAGGCGG CGCTGATCCATGTCAGCAACGCCCTCAAGGCGGCGCCCGACAACCGCGACGCCAAGATCCTGATGGGCGAGATCACGCTC TCGGGCGGCGATGTCTGGTCGGGCGAAAAGCTGCTCAAGGAGGTCCGCGACGGTGGGGCGCCGGCCGAGACATGGCTGCG TCCCCTGGCCAAATCCCTAATCCTTCAGCAGAAATTTGACGAAGCCCTGACTCTTGCCCGCTCCATCCCGGAAACCGAGC TGGTCGGCGCGGTAAAGACCATCGAAGGCCTCGCCCTGTTTGGCAAAGGCCAGGACGGGGCGGCGCGGCTGGCCCTGGAC AAAGCCCTCGACATCGACCCGGCCGACAAGGACGCCCTGATCGGCGCGGCCCAGATCGAAACCATGGCCGGCCATCAGGA CGCCGCCCGCGCCCTGCTCGCCCGAGCGGCGGCGGCGGCGCCCGATGATGTCGATGTGCTGGTGGCCCAGGCCGATACCG CGCTCAGCGCCAATGATCCGGCGGCGGCCGAGGGGCTTTTCTCCCAGGCCGCGGCCCGTCTGCCGCTCAACCCGCTGATC CGCCTGTCGCTGGCCCAGGCCCAGATCGAGGCCGGCAAGAACGCCGAGGCCCGCCAGACGCTCAATACGGTGCTGGCCGA TATTCCGGCCCACCCCTGGGCGCTGTACCTGCGCGGCCTCACCGCCTATCGCACCAACGATATGACCGCCGCCGACAAGG ATCTGACCGCTGCCCTGGCCTTGGCCAAGACCCTGCGCCCGGCGATTTTCCTGGCCGGGGTGGTCAAATACAACATCGGC GAATACGAACAGGCCTCGCGGCTGCTTGCCGGGCTGACCGAGACCGAGGGCAAAAGCAACAAGACCGCCGATGCCGTGCG CGCCGCCGCCCTTTTGAAACTGGGCCGCGACGACGAAAGTTATCGTCTGCTCCGCCCCTTGGCCGCCGGTGACGGCGAAA CCGCCGATCTTTACGCGATGGCCGCCGTCGCCGCCCAAGGAGCCGCCGCCATGGCCGACAGCGAAGGCTATTACCAGAAA GCCGTTGTTCTGCGCCCCGACGACCCCGCCTTGCTGACCAATCTCGGCATAGTCAAACTGGCGCGCGGCGACACCACCGC CGGCGAAGACACCTTGAACCGGGCGGCCGAGCTTGAAGGCGACGACAAGAAGGCGCTGCTGCTGCTGTTCTCCTCGTTGC TGCAGAAAAAGGACTTCGACAAGGCCGAGGCCCTGGCCGGGGACACCAAGCGGAAATATCCCGATCGCGCCTGGGGCTGG ACGATGGACGGCATGATCCAGGCCAGCCGGGGCGACACCGCCATGGCGCGCGCCGCCTTCGAAACCGCCGTTCGCAAAGA GCCAACGGCCGGTGACGCCGTGCGCAATCTGGCCCTGACCGCCCTGCAGTCGGGCGATACCGAAGGCGCCCGCGGCGTGG TCGAAGGCTATCTGCGGACTAATGCCGGGGATTCGGCGATGGCGATGATCGCCGCCGCCGTGGCCAATAAGCGCAATGAT CTGGTCGCCGTCGAAAAATGGCTGCGTCAGGCCCTGGAGCGCGATCCGGCCAACATGGAGGCCGCCAGCAATCTGGCGTC GCTGCTGACCTCGACCTCCCGTCCCCAGGCGGCAATCATCGTCGCCCAGGACGCCCTGCGGATTTCTCCCGATACTCCGG CGGTGATGGAAGCCCTGGGCAAGGCCCAATTGCTGATCGGCGATTATACGGCGGCGGCCGATGTGCTGCGCCGGGCGGTG GCGATCAAACCCAGCGGGCTGACCTATTATCTGCTGGCGACCGCCTATCTCAATCTCAACGACCCGCCCCGCCTCAAGGA GGCCCTGGAGTCGGTGGTCAAGCTGCAGCCCGATCATGTCGATTCGCGGGTGATGCTGGCGACCATGATCGTTGATGGCG GGTCTTTGAGCGACGCCAAGACCGCCGTCGAGGGCGTGACCACGGATTTCCCGGGCGATCCCCGGGCCCAGGAGGTTCGC GCCCGCTATCTGGCCAAGGCCGAGGGGCCGGCCAGCGCCATCACCTTCCTTGAAGCCTCGCTGACCGATCCCAACACCCG TCCGCGCAATCTCGTCATGCTGCTGGCCTCGGCCTATAATGAAAAGGGCGATGGCGCCAAGGCAAGCAGCCTGCTTGAAG ACTGGGTGGCCAAGAACCCCGATGACTACCCCGGCCGCCTGTCGCTGGCGACCCAGCAGATCGCCGCCAATCAGTTGGAA AAGGCCAAGACGACCCTGGAAAAAGGGCTGGAGCGGGTTCCCAACGACTGGATCGCCCGCAACAACCTTGCCGAGGTGAT GCTCCGTCTTGGCCAGACCTCGGCCGCCTATGACCAGATCGTCATCGCCCGACGCTCGGGGGGACCACAGCCGGCGCTGC TTGATACCGAGGGCCAGATCCTGCTCAAGATGGGCAAGGCCAGCGAGGCCGTCGAGATCCTGCGGCTGGCGACGATCGAT CGCAACGCCCCGCCCACCTATGGCCTGCACCTCGCCCAGGCCCTGGCGGCGGCGGGCAAGAAAGACGAGGCCGGCGAGCG TTTGCGGGCCTTGCTCGACAAGAACAACGCCTTCGAGGGGGCCGAACAGGCCCGGGCGCTTTTATCCGAGTTGCAGGGAT GA
Upstream 100 bases:
>100_bases GCGGCCCTGTTTTCGCGGGTGAGCGGCCGTCCGGTCCCGGTCTCCGGGCAACCGGCGGTTTCCCCCGCACGCGTTGGATC ATGAGGAGCGGAGAGCGATA
Downstream 100 bases:
>100_bases CGTTCCCGCGGAACGGGCGTCATAATGCCTTTCTGTCGATCCTTCTGCGATAAAGCGGAGCACCCATGACCGACATCACG CCCCCATCCTTCGAAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide TPR_4 Containing Protein
Number of amino acids: Translated: 933; Mature: 932
Protein sequence:
>933_residues MARSLKRFWSTTSALALVLALAACNDEAKDKARASAKAYDSAITAWRAGDQKAALIHVSNALKAAPDNRDAKILMGEITL SGGDVWSGEKLLKEVRDGGAPAETWLRPLAKSLILQQKFDEALTLARSIPETELVGAVKTIEGLALFGKGQDGAARLALD KALDIDPADKDALIGAAQIETMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI RLSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALALAKTLRPAIFLAGVVKYNIG EYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQK AVVLRPDDPALLTNLGIVKLARGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGW TMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAAVANKRND LVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAV AIKPSGLTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVR ARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLE KAKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAAYDQIVIARRSGGPQPALLDTEGQILLKMGKASEAVEILRLATID RNAPPTYGLHLAQALAAAGKKDEAGERLRALLDKNNAFEGAEQARALLSELQG
Sequences:
>Translated_933_residues MARSLKRFWSTTSALALVLALAACNDEAKDKARASAKAYDSAITAWRAGDQKAALIHVSNALKAAPDNRDAKILMGEITL SGGDVWSGEKLLKEVRDGGAPAETWLRPLAKSLILQQKFDEALTLARSIPETELVGAVKTIEGLALFGKGQDGAARLALD KALDIDPADKDALIGAAQIETMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI RLSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALALAKTLRPAIFLAGVVKYNIG EYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQK AVVLRPDDPALLTNLGIVKLARGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGW TMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAAVANKRND LVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAV AIKPSGLTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVR ARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLE KAKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAAYDQIVIARRSGGPQPALLDTEGQILLKMGKASEAVEILRLATID RNAPPTYGLHLAQALAAAGKKDEAGERLRALLDKNNAFEGAEQARALLSELQG >Mature_932_residues ARSLKRFWSTTSALALVLALAACNDEAKDKARASAKAYDSAITAWRAGDQKAALIHVSNALKAAPDNRDAKILMGEITLS GGDVWSGEKLLKEVRDGGAPAETWLRPLAKSLILQQKFDEALTLARSIPETELVGAVKTIEGLALFGKGQDGAARLALDK ALDIDPADKDALIGAAQIETMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLIR LSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALALAKTLRPAIFLAGVVKYNIGE YEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQKA VVLRPDDPALLTNLGIVKLARGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGWT MDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAAVANKRNDL VAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAVA IKPSGLTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVRA RYLAKAEGPASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLEK AKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAAYDQIVIARRSGGPQPALLDTEGQILLKMGKASEAVEILRLATIDR NAPPTYGLHLAQALAAAGKKDEAGERLRALLDKNNAFEGAEQARALLSELQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=307, Percent_Identity=24.7557003257329, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI32307148, Length=307, Percent_Identity=24.7557003257329, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98873; Mature: 98742
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSLKRFWSTTSALALVLALAACNDEAKDKARASAKAYDSAITAWRAGDQKAALIHVSN CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH ALKAAPDNRDAKILMGEITLSGGDVWSGEKLLKEVRDGGAPAETWLRPLAKSLILQQKFD HHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EALTLARSIPETELVGAVKTIEGLALFGKGQDGAARLALDKALDIDPADKDALIGAAQIE HHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCHHHEEHHHHH TMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI HHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHH RLSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALA HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHH LAKTLRPAIFLAGVVKYNIGEYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDES HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH YRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQKAVVLRPDDPALLTNLGIVKL HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCCHHHHCCCEEEE ARGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGW ECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCCCCCC TMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRT CCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NAGDSAMAMIAAAVANKRNDLVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAII CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEE VAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAVAIKPSGLTYYLLATAYLNLN EEECCEEECCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCC DPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVR CCHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHH ARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNP HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC DDYPGRLSLATQQIAANQLEKAKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAAYDQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCHHHHHE VIARRSGGPQPALLDTEGQILLKMGKASEAVEILRLATIDRNAPPTYGLHLAQALAAAGK EEEECCCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC KDEAGERLRALLDKNNAFEGAEQARALLSELQG CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ARSLKRFWSTTSALALVLALAACNDEAKDKARASAKAYDSAITAWRAGDQKAALIHVSN CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH ALKAAPDNRDAKILMGEITLSGGDVWSGEKLLKEVRDGGAPAETWLRPLAKSLILQQKFD HHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EALTLARSIPETELVGAVKTIEGLALFGKGQDGAARLALDKALDIDPADKDALIGAAQIE HHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCHHHEEHHHHH TMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI HHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHH RLSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALA HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHH LAKTLRPAIFLAGVVKYNIGEYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDES HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH YRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQKAVVLRPDDPALLTNLGIVKL HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCCHHHHCCCEEEE ARGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGW ECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCCCCCC TMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRT CCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NAGDSAMAMIAAAVANKRNDLVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAII CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEE VAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAVAIKPSGLTYYLLATAYLNLN EEECCEEECCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCC DPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVR CCHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHH ARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNP HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC DDYPGRLSLATQQIAANQLEKAKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAAYDQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCHHHHHE VIARRSGGPQPALLDTEGQILLKMGKASEAVEILRLATIDRNAPPTYGLHLAQALAAAGK EEEECCCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC KDEAGERLRALLDKNNAFEGAEQARALLSELQG CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA