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The map label for this gene is trg [H]

Identifier: 83594367

GI number: 83594367

Start: 3497481

End: 3499187

Strand: Direct

Name: trg [H]

Synonym: Rru_A3037

Alternate gene names: 83594367

Gene position: 3497481-3499187 (Clockwise)

Preceding gene: 83594366

Following gene: 83594368

Centisome position: 80.35

GC content: 67.37

Gene sequence:

>1707_bases
ATGAGCGTGATAACCCGATCGATTCGGGGGAAGCTGTTCGCGGCTTTCCTGGCGGCGACCCTTGGTGTCCTCATCTCCAG
CAGCCTGGGGATCATCCTGGTCTCGCGCGAGGGCGATCTGGCCCATGAGGCGATGACCGGTCTCGCCCCCCTCGCCGATG
CGGCGATGGAGACCAAGATTTCCGCCACCCGCGCCCACCTCGTCTTCGAAGAGATTATGGCCGGGGATGAGACCGAGTCG
ATCTCCGAGGTCTGGTCGCTGCTCGACGACGCCGACTGGTATTTGCTGGCCATGCTCAATGGCGGCGCGAAAGCCAAGGA
AACCTTCGTGAAGACCGACAATCCGGCCGTCCGCGTCCGGCTTGGAGAGGCGCGCGAGGTGCTGGCCGCCTTTCGCGTCA
CGGCGGAAGGCCGCTACAAGGCTTTTGGCGACCAGGGACGGGGGCAGACGGTGGCCGGAACCGATCTCGACGTCGCCTTC
GACGCCGCCTTCGAGAGCTTCGCCACCCTCACCGATTCCATCGAAGAGCTTGTCCATACCCAGATTGACGAGCAGGTCGA
GAAGATCGAGCAGACCAAAACAAGCTCGCTGTGGCTGATGTCGGCGACGGCCTTGATCGCGCTGGCCGTTTCCTTATCCC
TTGCCGTGGTCATTGGCCGCTCGGTTTCGCGGCGGATCACCGATCTGTCGACGACGATGGGCCAGATCACCGCCGGCGAC
CACGCCGCCCCGGTTCCCCATACCACCTCGACCGACGAGATCGGCGTCATGGGCCGGGCGCTGGTCACCCTGCGCGATGG
CGTTGACGAAGCCGCCCGACTGCGCGCCTCGCTGCAGCTCAAGGCCGAGGACGAGGCCCGCCAACGCACCCATCTCGAAG
GGGCGATCATCGGCTTTGACCGCTCAATCGGCGAGGTCATGGCCTCGTTGCGCGACGTCGTCGAGGTTCTCCATGGCGCG
GTCGCCGACCTTGAGCACGAAGCCAGCACCGTGGACCAGTTGACCAGCGGCGTTTCGGCCAAGACCGCCGAGGCCGCGTC
CAACGTGGAAAGCGTGGCGGCGTCGATCGAGGAGCTTTCGGCCTCGGTCCGCGAAATCTCGGCCCAGGCCGCCCGGTCGT
CGGAAGCCGCCGGCTTGGCCGCCCGCGAGGCCGAGGGCGCCAACAAGCTGATCGGCGGCCTGCAAACGGCAACCGACGCC
ATCAGCGAGGTGATGGCGCTGATCACCGCCATCGCCGCCCAAACCAATCTGCTGGCGCTCAACGCCACGATCGAGGCGGC
GCGCGCCGGCGATGCCGGCAAGGGCTTCGCCGTGGTGGCGGGTGAAGTGAAGACCCTCGCCAGCCAGACCCAGAAGGCGA
CCGAGCAGATCCATGGACAGGTCGACGCCATGCACGACGTCACCCGCCAGTCGGTGGCCGCCATCGGATCGATCGCCCGC
AGCGTCGATACCATGGAGGCGATGGCCGCCTCGATCGCCGCCGCCGTCGAACAGCAGGGCGCCGCCTCGGGCGGCATCGC
CCGGAATGCCGAGCAGGCCTCGGCGGCGACCGGCGTGGTCTCCGAACAGATCGGAGCGGTCCGCGACAGCTCTGATGCGA
CCAGCCGGGCCTCGCGCGCCTTGAACGAGGCGACGGCGCGGCTCTCGGCCCAGATGGACCTGCTCTCGCACTCCGTCGAA
AGCTTCCTGACGGCCGTTCGCCGCTAG

Upstream 100 bases:

>100_bases
TTGCGCCTGCTCCCCTGGCGATCGCGCCGATCGTCCCCATTTCCTGCGGGGGATGTGCGCAGAACGCCGGGCTCGGCAGG
TCCGGCCAAGGGGAATTGGT

Downstream 100 bases:

>100_bases
CGCTTCGCTCCCTCGGGGGGGCCGACCTCCCCCGTCCGGGACCCGGGTCTCCCTTGACCTTCCAGGCCGACAGGCGGGAA
AGCTTGTCAGATAACGCAAC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSVITRSIRGKLFAAFLAATLGVLISSSLGIILVSREGDLAHEAMTGLAPLADAAMETKISATRAHLVFEEIMAGDETES
ISEVWSLLDDADWYLLAMLNGGAKAKETFVKTDNPAVRVRLGEAREVLAAFRVTAEGRYKAFGDQGRGQTVAGTDLDVAF
DAAFESFATLTDSIEELVHTQIDEQVEKIEQTKTSSLWLMSATALIALAVSLSLAVVIGRSVSRRITDLSTTMGQITAGD
HAAPVPHTTSTDEIGVMGRALVTLRDGVDEAARLRASLQLKAEDEARQRTHLEGAIIGFDRSIGEVMASLRDVVEVLHGA
VADLEHEASTVDQLTSGVSAKTAEAASNVESVAASIEELSASVREISAQAARSSEAAGLAAREAEGANKLIGGLQTATDA
ISEVMALITAIAAQTNLLALNATIEAARAGDAGKGFAVVAGEVKTLASQTQKATEQIHGQVDAMHDVTRQSVAAIGSIAR
SVDTMEAMAASIAAAVEQQGAASGGIARNAEQASAATGVVSEQIGAVRDSSDATSRASRALNEATARLSAQMDLLSHSVE
SFLTAVRR

Sequences:

>Translated_568_residues
MSVITRSIRGKLFAAFLAATLGVLISSSLGIILVSREGDLAHEAMTGLAPLADAAMETKISATRAHLVFEEIMAGDETES
ISEVWSLLDDADWYLLAMLNGGAKAKETFVKTDNPAVRVRLGEAREVLAAFRVTAEGRYKAFGDQGRGQTVAGTDLDVAF
DAAFESFATLTDSIEELVHTQIDEQVEKIEQTKTSSLWLMSATALIALAVSLSLAVVIGRSVSRRITDLSTTMGQITAGD
HAAPVPHTTSTDEIGVMGRALVTLRDGVDEAARLRASLQLKAEDEARQRTHLEGAIIGFDRSIGEVMASLRDVVEVLHGA
VADLEHEASTVDQLTSGVSAKTAEAASNVESVAASIEELSASVREISAQAARSSEAAGLAAREAEGANKLIGGLQTATDA
ISEVMALITAIAAQTNLLALNATIEAARAGDAGKGFAVVAGEVKTLASQTQKATEQIHGQVDAMHDVTRQSVAAIGSIAR
SVDTMEAMAASIAAAVEQQGAASGGIARNAEQASAATGVVSEQIGAVRDSSDATSRASRALNEATARLSAQMDLLSHSVE
SFLTAVRR
>Mature_567_residues
SVITRSIRGKLFAAFLAATLGVLISSSLGIILVSREGDLAHEAMTGLAPLADAAMETKISATRAHLVFEEIMAGDETESI
SEVWSLLDDADWYLLAMLNGGAKAKETFVKTDNPAVRVRLGEAREVLAAFRVTAEGRYKAFGDQGRGQTVAGTDLDVAFD
AAFESFATLTDSIEELVHTQIDEQVEKIEQTKTSSLWLMSATALIALAVSLSLAVVIGRSVSRRITDLSTTMGQITAGDH
AAPVPHTTSTDEIGVMGRALVTLRDGVDEAARLRASLQLKAEDEARQRTHLEGAIIGFDRSIGEVMASLRDVVEVLHGAV
ADLEHEASTVDQLTSGVSAKTAEAASNVESVAASIEELSASVREISAQAARSSEAAGLAAREAEGANKLIGGLQTATDAI
SEVMALITAIAAQTNLLALNATIEAARAGDAGKGFAVVAGEVKTLASQTQKATEQIHGQVDAMHDVTRQSVAAIGSIARS
VDTMEAMAASIAAAVEQQGAASGGIARNAEQASAATGVVSEQIGAVRDSSDATSRASRALNEATARLSAQMDLLSHSVES
FLTAVRR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=432, Percent_Identity=29.1666666666667, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=27.0186335403727, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=283, Percent_Identity=31.4487632508834, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=135, Percent_Identity=38.5185185185185, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=205, Percent_Identity=30.2439024390244, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59120; Mature: 58989

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVITRSIRGKLFAAFLAATLGVLISSSLGIILVSREGDLAHEAMTGLAPLADAAMETKI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SATRAHLVFEEIMAGDETESISEVWSLLDDADWYLLAMLNGGAKAKETFVKTDNPAVRVR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHEECCCCEEEEE
LGEAREVLAAFRVTAEGRYKAFGDQGRGQTVAGTDLDVAFDAAFESFATLTDSIEELVHT
ECHHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIDEQVEKIEQTKTSSLWLMSATALIALAVSLSLAVVIGRSVSRRITDLSTTMGQITAGD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HAAPVPHTTSTDEIGVMGRALVTLRDGVDEAARLRASLQLKAEDEARQRTHLEGAIIGFD
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHHHHHHHHCCEEEECC
RSIGEVMASLRDVVEVLHGAVADLEHEASTVDQLTSGVSAKTAEAASNVESVAASIEELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ASVREISAQAARSSEAAGLAAREAEGANKLIGGLQTATDAISEVMALITAIAAQTNLLAL
HHHHHHHHHHHHCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NATIEAARAGDAGKGFAVVAGEVKTLASQTQKATEQIHGQVDAMHDVTRQSVAAIGSIAR
ECHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDTMEAMAASIAAAVEQQGAASGGIARNAEQASAATGVVSEQIGAVRDSSDATSRASRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LNEATARLSAQMDLLSHSVESFLTAVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVITRSIRGKLFAAFLAATLGVLISSSLGIILVSREGDLAHEAMTGLAPLADAAMETKI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SATRAHLVFEEIMAGDETESISEVWSLLDDADWYLLAMLNGGAKAKETFVKTDNPAVRVR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHEECCCCEEEEE
LGEAREVLAAFRVTAEGRYKAFGDQGRGQTVAGTDLDVAFDAAFESFATLTDSIEELVHT
ECHHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIDEQVEKIEQTKTSSLWLMSATALIALAVSLSLAVVIGRSVSRRITDLSTTMGQITAGD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HAAPVPHTTSTDEIGVMGRALVTLRDGVDEAARLRASLQLKAEDEARQRTHLEGAIIGFD
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHHHHHHHHCCEEEECC
RSIGEVMASLRDVVEVLHGAVADLEHEASTVDQLTSGVSAKTAEAASNVESVAASIEELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ASVREISAQAARSSEAAGLAAREAEGANKLIGGLQTATDAISEVMALITAIAAQTNLLAL
HHHHHHHHHHHHCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NATIEAARAGDAGKGFAVVAGEVKTLASQTQKATEQIHGQVDAMHDVTRQSVAAIGSIAR
ECHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDTMEAMAASIAAAVEQQGAASGGIARNAEQASAATGVVSEQIGAVRDSSDATSRASRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LNEATARLSAQMDLLSHSVESFLTAVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]