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The map label for this gene is dinG [H]

Identifier: 83594366

GI number: 83594366

Start: 3494534

End: 3497317

Strand: Direct

Name: dinG [H]

Synonym: Rru_A3036

Alternate gene names: 83594366

Gene position: 3494534-3497317 (Clockwise)

Preceding gene: 83594365

Following gene: 83594367

Centisome position: 80.28

GC content: 72.27

Gene sequence:

>2784_bases
ATGAGCCTGCCCCCCCCTCCCCTTCCGCCGGCGCCGCCAGCCCGACCGCTGCCGGCGCCGCCCCCCGTTCCCGCCCTGGT
GACCGGAGCGCGGGGCGGGGTGATGCTGTCGCCCGATGGCGAGATCGAAACCCTGGTGCCCGGGGCCGCCGCCGCCGAGC
GTCTGCGGCTGGCCTGCCCGATGGTCTGCCACCTGCCCGCCGCCGCCCAGCGCCTGCAGGCGACGTGGTTTCCCGGCTAC
GACCTTCTCGACCTCCACGCCTTCGTCCGCCCGGCCCGCTTCTGCGCCCCCACGCCGCGCGGTCTGGCCCGCGCCCTGGG
ATTGCCGCTGCCGACCTCGCCCGAGGACGAGGCGCGTACCCTGGTCCATGCCGCCATGGTGCTGCTTGATGACCTGAGCC
GCCTTCCCGACAAGGCCAAGCGCGAGGCCCATGCCATCGCCCTAGTCATGGCGCGCGGCGGCTGGCCCTGGGGGCGCGGC
GTGCTCGCCCTGCTCGATCCCGGCGACGGCGGCGGAGCGGCGGGGGCGCCACGCGCCCTGGCCGTGTGGAAAGACCTGCC
CGAAGTCTCAGAACACGCCCCCGAGCCGCCGCCCGGCAATATCCCGGTCGAACCGGCCGAGGCCCGGGCCAAGCTTGCCG
CCCTGCTTGGCCAAGGGGCCGAGGCCCGCCCCCAGCAGGCCGATTACGCCAGCGCGCTGTGCGTCGCCTTCCAGCCGCGC
GCCACCCCCGATTGGCCGACCCTGGTTCTGGCCGAGGCCGGCACCGGCGTGGGCAAGACGCTGGGCTATATCGCCCCGGC
CAGCCTGTGGGCCGAGCGCAACGAAGGCACGGTGTGGATCAGCACCTATACCCGCAATCTGCAGCGCCAGTTGGACGGCG
AACTCGATCGGCTTTATCCCGATCCGGCCGAGAAGATGCGTAAGGTGGTGATCCGCAAGGGCCGCGAAAACTATCTGTGC
CTGCTCAATTACGAAGAGGCGGTGGGGCGGCTGGGCGCCACCCCCCAAGAGGCGGTGGCCCTTGGCCTGATGGCGCGCTG
GATCAAGGCCACCCGCGACGGCGATATGGTCGGCGGCGATTTCCCCGGCTGGATGGTCGATATCCTGGGCCGCGAGCGCT
CGCTGGCCCTGGCCGATCGCCGGGGGGAATGCGTGTTCTCGTCGTGCGACCACTACGACCGCTGCTTCATCGAACGCGCC
GTGCGCCGGGCCCGGCGTGCCCGGCTGGTGGTCGCCAACCACGCCCTGGTGCTGATCCAGGCCGCCCTGGGCGGCATCGA
TGACGACAGCCGCCCCACCCGCTATATCCTTGACGAGGGGCATCATGTGTTCGATGCCGCCGACAGCGCCTTTTCCGCCC
ATCTTTCGGGCTTCGAGGGCGCCGAATTGCGGCGCTGGCTGCTCGGCGCCGAAGAGGGTCACCGCTCGCGGGCGCGCGGC
CTGCGGCGTCGGGTGGACGGGCTTTATGATCAAGCCGGTCCGCTGGCCGCCGATCTGGAGGAGGCCCTGGATGGCGCCCG
TGCCTTGCCCGGGCCGGGCTGGGCGCAAAGGCTGGCCGGCGGCACCGGGCGCGGCGCCATCGAACGCTTCCTGGCAACGG
CGCGCACCCAGGTGCTGGCCCGCGCCCCGGCAAGCGAAAGCGCCCATGGCCTGGAAACCGACCTGCGGCCGCCGCTGCCC
GAATTGCTCGACGACGCCCGCGCCGTCGTCGCCGCCCTAACCGATCTTGTCGTGCCGCTGAAGGCTTTCGTCCGTGCCCT
GGTCAAACGCCTTGACGAGGAGGCGGACGAGCTTGACACCCCGACGCGCGCCCGCATCGAAAGCGTCGCCCGCTCGATCG
AACGCCGCGCCCTGGGACCGGCCCAGGTCTGGCGCGATATGGCCGCCTCGATCGCCGAGGACCCGCCCGCCGATTTCGTC
GATTGGCTCGAACTTGAACGCAGCGAGGGCCGCGAGGTCGATATCGGCATGCACCGCCATTGGATCGACCCCACCCGCCC
CTTCGCCGCCACTTTGGCCGCCCGCGCCCATGGTCTGGTGGTGACCTCGGCGACGCTGCGCGACGGCAGCGGCGATGGCG
AGGCCGATTGGCTGAGCGCCGAGGCCCGGGCCGGCGCCCCCCATCTGGGCACCCCGGCCATCCGCGCCAGCGTTCCCTCG
CCCTTCGATTACCCCGCCACCACGCGGGTTCTGGTGATCACCGATGTCAAGCGCGACGACCTCGATCAGGTCTCCGCCGC
CTATCGCGAGCTGTTCCGCGCGGCCGGCGGCGGCGGGCTGGGGTTGTTCACCGCCATCGGCCGCCTGCGCGCCGTCCATG
CCCGCATCGCCCCGGCCCTGGACGCCCTGGGCCTGCCCCTGCTCGCCCAGCATGTCGACGCCATGGATATCAGCACCCTG
ATCGAGATCTTCCGCGCCGAGGAGGACGCCTGCCTGCTCGGCACCGACGCGGTCAGGGACGGGGTGGACGTGCCCGGACG
CTCGCTGCGCCTGATCGTCTTTGACCGCGTGCCCTGGCCGCGCCCCGACATCTTGCACAAGGCGCGGCGCAAGGCGATGG
GCGGAAGCCTTTATGACGACCGCATCGCCCGGCTGCGCCTGAAGCAGGCCTTCGGCCGGCTGGTCCGCCGGGCCGGCGAT
CGCGGCGTCTTCGTCATGCTCGATTCACGCCTGCCCTCGCGCCTGGGCGGCGCCTTCCCCGAAGGCGTGGTGATCGAACG
GGTCGGCCTCGCCAGCGCCGTCGCCATCGTTGCCCAAAGCGTCGGCTCCCCCCGGGGGCGGTAA

Upstream 100 bases:

>100_bases
CGGCTTCGCCCGCAGCTATAGCGGCGGCGCGCGCGCAAGCTGGTGCGGATAACCCCCGACCGCCGATGACAGGGCGCCTC
GCCCCCCGCTATACTGGGGC

Downstream 100 bases:

>100_bases
CCAGGGCGGAGTAGGGCCAAGGCGCCGCCAGAAGGAAAATTTCCCAAGATCCTTGCCGCGCTTTTGCGCCTGCTCCCCTG
GCGATCGCGCCGATCGTCCC

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 927; Mature: 926

Protein sequence:

>927_residues
MSLPPPPLPPAPPARPLPAPPPVPALVTGARGGVMLSPDGEIETLVPGAAAAERLRLACPMVCHLPAAAQRLQATWFPGY
DLLDLHAFVRPARFCAPTPRGLARALGLPLPTSPEDEARTLVHAAMVLLDDLSRLPDKAKREAHAIALVMARGGWPWGRG
VLALLDPGDGGGAAGAPRALAVWKDLPEVSEHAPEPPPGNIPVEPAEARAKLAALLGQGAEARPQQADYASALCVAFQPR
ATPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRNLQRQLDGELDRLYPDPAEKMRKVVIRKGRENYLC
LLNYEEAVGRLGATPQEAVALGLMARWIKATRDGDMVGGDFPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERA
VRRARRARLVVANHALVLIQAALGGIDDDSRPTRYILDEGHHVFDAADSAFSAHLSGFEGAELRRWLLGAEEGHRSRARG
LRRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRLAGGTGRGAIERFLATARTQVLARAPASESAHGLETDLRPPLP
ELLDDARAVVAALTDLVVPLKAFVRALVKRLDEEADELDTPTRARIESVARSIERRALGPAQVWRDMAASIAEDPPADFV
DWLELERSEGREVDIGMHRHWIDPTRPFAATLAARAHGLVVTSATLRDGSGDGEADWLSAEARAGAPHLGTPAIRASVPS
PFDYPATTRVLVITDVKRDDLDQVSAAYRELFRAAGGGGLGLFTAIGRLRAVHARIAPALDALGLPLLAQHVDAMDISTL
IEIFRAEEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRPDILHKARRKAMGGSLYDDRIARLRLKQAFGRLVRRAGD
RGVFVMLDSRLPSRLGGAFPEGVVIERVGLASAVAIVAQSVGSPRGR

Sequences:

>Translated_927_residues
MSLPPPPLPPAPPARPLPAPPPVPALVTGARGGVMLSPDGEIETLVPGAAAAERLRLACPMVCHLPAAAQRLQATWFPGY
DLLDLHAFVRPARFCAPTPRGLARALGLPLPTSPEDEARTLVHAAMVLLDDLSRLPDKAKREAHAIALVMARGGWPWGRG
VLALLDPGDGGGAAGAPRALAVWKDLPEVSEHAPEPPPGNIPVEPAEARAKLAALLGQGAEARPQQADYASALCVAFQPR
ATPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRNLQRQLDGELDRLYPDPAEKMRKVVIRKGRENYLC
LLNYEEAVGRLGATPQEAVALGLMARWIKATRDGDMVGGDFPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERA
VRRARRARLVVANHALVLIQAALGGIDDDSRPTRYILDEGHHVFDAADSAFSAHLSGFEGAELRRWLLGAEEGHRSRARG
LRRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRLAGGTGRGAIERFLATARTQVLARAPASESAHGLETDLRPPLP
ELLDDARAVVAALTDLVVPLKAFVRALVKRLDEEADELDTPTRARIESVARSIERRALGPAQVWRDMAASIAEDPPADFV
DWLELERSEGREVDIGMHRHWIDPTRPFAATLAARAHGLVVTSATLRDGSGDGEADWLSAEARAGAPHLGTPAIRASVPS
PFDYPATTRVLVITDVKRDDLDQVSAAYRELFRAAGGGGLGLFTAIGRLRAVHARIAPALDALGLPLLAQHVDAMDISTL
IEIFRAEEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRPDILHKARRKAMGGSLYDDRIARLRLKQAFGRLVRRAGD
RGVFVMLDSRLPSRLGGAFPEGVVIERVGLASAVAIVAQSVGSPRGR
>Mature_926_residues
SLPPPPLPPAPPARPLPAPPPVPALVTGARGGVMLSPDGEIETLVPGAAAAERLRLACPMVCHLPAAAQRLQATWFPGYD
LLDLHAFVRPARFCAPTPRGLARALGLPLPTSPEDEARTLVHAAMVLLDDLSRLPDKAKREAHAIALVMARGGWPWGRGV
LALLDPGDGGGAAGAPRALAVWKDLPEVSEHAPEPPPGNIPVEPAEARAKLAALLGQGAEARPQQADYASALCVAFQPRA
TPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRNLQRQLDGELDRLYPDPAEKMRKVVIRKGRENYLCL
LNYEEAVGRLGATPQEAVALGLMARWIKATRDGDMVGGDFPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERAV
RRARRARLVVANHALVLIQAALGGIDDDSRPTRYILDEGHHVFDAADSAFSAHLSGFEGAELRRWLLGAEEGHRSRARGL
RRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRLAGGTGRGAIERFLATARTQVLARAPASESAHGLETDLRPPLPE
LLDDARAVVAALTDLVVPLKAFVRALVKRLDEEADELDTPTRARIESVARSIERRALGPAQVWRDMAASIAEDPPADFVD
WLELERSEGREVDIGMHRHWIDPTRPFAATLAARAHGLVVTSATLRDGSGDGEADWLSAEARAGAPHLGTPAIRASVPSP
FDYPATTRVLVITDVKRDDLDQVSAAYRELFRAAGGGGLGLFTAIGRLRAVHARIAPALDALGLPLLAQHVDAMDISTLI
EIFRAEEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRPDILHKARRKAMGGSLYDDRIARLRLKQAFGRLVRRAGDR
GVFVMLDSRLPSRLGGAFPEGVVIERVGLASAVAIVAQSVGSPRGR

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=681, Percent_Identity=25.697503671072, Blast_Score=132, Evalue=7e-32,
Organism=Escherichia coli, GI1787018, Length=723, Percent_Identity=23.2365145228216, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 99715; Mature: 99584

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPPPLPPAPPARPLPAPPPVPALVTGARGGVMLSPDGEIETLVPGAAAAERLRLACP
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEECCCHHHHHHHHHHCH
MVCHLPAAAQRLQATWFPGYDLLDLHAFVRPARFCAPTPRGLARALGLPLPTSPEDEART
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHH
LVHAAMVLLDDLSRLPDKAKREAHAIALVMARGGWPWGRGVLALLDPGDGGGAAGAPRAL
HHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHH
AVWKDLPEVSEHAPEPPPGNIPVEPAEARAKLAALLGQGAEARPQQADYASALCVAFQPR
HHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCC
ATPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRNLQRQLDGELDRLYP
CCCCCCEEEEEECCCCHHHHHHHHCHHHHHHCCCCCEEEEEHHHHHHHHHHCCHHHHCCC
DPAEKMRKVVIRKGRENYLCLLNYEEAVGRLGATPQEAVALGLMARWIKATRDGDMVGGD
CHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERAVRRARRARLVVANHALVLIQ
CCHHHHHHHCCCCCEEHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
AALGGIDDDSRPTRYILDEGHHVFDAADSAFSAHLSGFEGAELRRWLLGAEEGHRSRARG
HHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
LRRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRLAGGTGRGAIERFLATARTQVLA
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
RAPASESAHGLETDLRPPLPELLDDARAVVAALTDLVVPLKAFVRALVKRLDEEADELDT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRARIESVARSIERRALGPAQVWRDMAASIAEDPPADFVDWLELERSEGREVDIGMHRH
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCHHHH
WIDPTRPFAATLAARAHGLVVTSATLRDGSGDGEADWLSAEARAGAPHLGTPAIRASVPS
CCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHCCCHHHCCCCCCCCCHHHCCCCC
PFDYPATTRVLVITDVKRDDLDQVSAAYRELFRAAGGGGLGLFTAIGRLRAVHARIAPAL
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DALGLPLLAQHVDAMDISTLIEIFRAEEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWP
HHHCHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCEEEEEEECCCCC
RPDILHKARRKAMGGSLYDDRIARLRLKQAFGRLVRRAGDRGVFVMLDSRLPSRLGGAFP
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCC
EGVVIERVGLASAVAIVAQSVGSPRGR
CCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLPPPPLPPAPPARPLPAPPPVPALVTGARGGVMLSPDGEIETLVPGAAAAERLRLACP
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEECCCHHHHHHHHHHCH
MVCHLPAAAQRLQATWFPGYDLLDLHAFVRPARFCAPTPRGLARALGLPLPTSPEDEART
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHH
LVHAAMVLLDDLSRLPDKAKREAHAIALVMARGGWPWGRGVLALLDPGDGGGAAGAPRAL
HHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHH
AVWKDLPEVSEHAPEPPPGNIPVEPAEARAKLAALLGQGAEARPQQADYASALCVAFQPR
HHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCC
ATPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRNLQRQLDGELDRLYP
CCCCCCEEEEEECCCCHHHHHHHHCHHHHHHCCCCCEEEEEHHHHHHHHHHCCHHHHCCC
DPAEKMRKVVIRKGRENYLCLLNYEEAVGRLGATPQEAVALGLMARWIKATRDGDMVGGD
CHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERAVRRARRARLVVANHALVLIQ
CCHHHHHHHCCCCCEEHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
AALGGIDDDSRPTRYILDEGHHVFDAADSAFSAHLSGFEGAELRRWLLGAEEGHRSRARG
HHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
LRRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRLAGGTGRGAIERFLATARTQVLA
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
RAPASESAHGLETDLRPPLPELLDDARAVVAALTDLVVPLKAFVRALVKRLDEEADELDT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRARIESVARSIERRALGPAQVWRDMAASIAEDPPADFVDWLELERSEGREVDIGMHRH
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCHHHH
WIDPTRPFAATLAARAHGLVVTSATLRDGSGDGEADWLSAEARAGAPHLGTPAIRASVPS
CCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHCCCHHHCCCCCCCCCHHHCCCCC
PFDYPATTRVLVITDVKRDDLDQVSAAYRELFRAAGGGGLGLFTAIGRLRAVHARIAPAL
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DALGLPLLAQHVDAMDISTLIEIFRAEEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWP
HHHCHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCEEEEEEECCCCC
RPDILHKARRKAMGGSLYDDRIARLRLKQAFGRLVRRAGDRGVFVMLDSRLPSRLGGAFP
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCC
EGVVIERVGLASAVAIVAQSVGSPRGR
CCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]