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The map label for this gene is glyQ

Identifier: 83594286

GI number: 83594286

Start: 3402562

End: 3403449

Strand: Direct

Name: glyQ

Synonym: Rru_A2954

Alternate gene names: 83594286

Gene position: 3402562-3403449 (Clockwise)

Preceding gene: 83594285

Following gene: 83594287

Centisome position: 78.17

GC content: 64.86

Gene sequence:

>888_bases
ATGGCCGAGACACCGAGTTTTCAGTCGCTGATCCTGCGCCTCCAGCAGTTTTGGGCGGCCCAGGGCTGCGTCCTGCTCCA
GCCCTACGATATGGAAGTGGGCGCGGGCACCTTCCATCCGGCCACGACGCTGCGCGCGCTTGGTCCCGAGCCGTGGAAGG
CCGCCTATGTCCAGCCCTCGCGCCGGCCGACCGACGGCCGCTATGGCGAGAACCCCAACCGCCTGCAGCATTACTATCAG
TTCCAGGTGATCTTGAAGCCCTCGCCGGCCGATCCCCAGGCGCTCTATCTCGACAGCCTGCGCGCGCTCGGCATCGATCC
GCTCAAGCATGACATCCGCTTCGTCGAAGACGACTGGGAAAGCCCGACGCTGGGCGCCTGGGGGTTGGGCTGGGAAGTGT
GGTGCGACGGCATGGAGGTGACGCAGTTCACCTATTTCCAGCAGGTCGGCGGCTTCGACTGCGACCCGGTGCCCGTCGAG
ATGACCTATGGCCTGGAACGTCTGGCCATGTACATCCAGGGCGTCGAGAACGTCTATGACCTGGATTACAACGGGGCGGG
CGTGCGCTACGGCGACATCTTCCTTCAGGGCGAGAAGGAATTCTCGGCCCATAATTTCGAATACGCCAATACCGAGGCGC
TCTTCCGCCATTTCAAGGACGCCGAGGAGGAATGCATGGCCCTGCTCGCCAAGGGCGTGCCCTTGCCGGCCTATGATCAG
TGCATCAAGGCCAGCCACCGCTTCAATTTGCTTGATGCCCGGGGCGTCATCAGCGTGACCGAACGCGCCGCCTATATCGG
CCGGGTGCGGGCCCTGGCCAAGGGCTGTTGCGAGGGCTGGCTGCGGGCGCGCGGCCACCTGCCTCCGCTGACCGGAACGG
AGGGCTGA

Upstream 100 bases:

>100_bases
TCCTGACGCCGGTTGACCTTTGCGCGGTGTGCCGCCGTTGACCCTGATGCGGGCGGGGGGTAGGTTTCCCGACCCTTTCC
CACCCAGATTCAAGGTCCCC

Downstream 100 bases:

>100_bases
GCATCATGGCCGAGTTGCTTCTGGAACTGTTGTCGGAAGAAATCCCCGCCCGCATGCAGGTGCGCGCCATCGAGGATCTG
ACCAAGCTGGTCGGCACCGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAETPSFQSLILRLQQFWAAQGCVLLQPYDMEVGAGTFHPATTLRALGPEPWKAAYVQPSRRPTDGRYGENPNRLQHYYQ
FQVILKPSPADPQALYLDSLRALGIDPLKHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCDPVPVE
MTYGLERLAMYIQGVENVYDLDYNGAGVRYGDIFLQGEKEFSAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQ
CIKASHRFNLLDARGVISVTERAAYIGRVRALAKGCCEGWLRARGHLPPLTGTEG

Sequences:

>Translated_295_residues
MAETPSFQSLILRLQQFWAAQGCVLLQPYDMEVGAGTFHPATTLRALGPEPWKAAYVQPSRRPTDGRYGENPNRLQHYYQ
FQVILKPSPADPQALYLDSLRALGIDPLKHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCDPVPVE
MTYGLERLAMYIQGVENVYDLDYNGAGVRYGDIFLQGEKEFSAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQ
CIKASHRFNLLDARGVISVTERAAYIGRVRALAKGCCEGWLRARGHLPPLTGTEG
>Mature_294_residues
AETPSFQSLILRLQQFWAAQGCVLLQPYDMEVGAGTFHPATTLRALGPEPWKAAYVQPSRRPTDGRYGENPNRLQHYYQF
QVILKPSPADPQALYLDSLRALGIDPLKHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCDPVPVEM
TYGLERLAMYIQGVENVYDLDYNGAGVRYGDIFLQGEKEFSAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQC
IKASHRFNLLDARGVISVTERAAYIGRVRALAKGCCEGWLRARGHLPPLTGTEG

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=290, Percent_Identity=64.8275862068965, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_RHORT (Q2RQ44)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_428038.1
- HSSP:   Q9WY59
- ProteinModelPortal:   Q2RQ44
- SMR:   Q2RQ44
- STRING:   Q2RQ44
- GeneID:   3836399
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2954
- NMPDR:   fig|1085.1.peg.597
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   Q2RQ44
- ProtClustDB:   PRK09348
- BioCyc:   RRUB269796:RRU_A2954-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 33225; Mature: 33094

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETPSFQSLILRLQQFWAAQGCVLLQPYDMEVGAGTFHPATTLRALGPEPWKAAYVQPS
CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
RRPTDGRYGENPNRLQHYYQFQVILKPSPADPQALYLDSLRALGIDPLKHDIRFVEDDWE
CCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHEEECCCCC
SPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCDPVPVEMTYGLERLAMYIQGVENVYD
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEE
LDYNGAGVRYGDIFLQGEKEFSAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQ
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCHHHH
CIKASHRFNLLDARGVISVTERAAYIGRVRALAKGCCEGWLRARGHLPPLTGTEG
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AETPSFQSLILRLQQFWAAQGCVLLQPYDMEVGAGTFHPATTLRALGPEPWKAAYVQPS
CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
RRPTDGRYGENPNRLQHYYQFQVILKPSPADPQALYLDSLRALGIDPLKHDIRFVEDDWE
CCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHEEECCCCC
SPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCDPVPVEMTYGLERLAMYIQGVENVYD
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEE
LDYNGAGVRYGDIFLQGEKEFSAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQ
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCHHHH
CIKASHRFNLLDARGVISVTERAAYIGRVRALAKGCCEGWLRARGHLPPLTGTEG
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA