| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594237
Identifier: 83594237
GI number: 83594237
Start: 3349329
End: 3350306
Strand: Reverse
Name: 83594237
Synonym: Rru_A2905
Alternate gene names: NA
Gene position: 3350306-3349329 (Counterclockwise)
Preceding gene: 83594249
Following gene: 83594236
Centisome position: 76.97
GC content: 73.01
Gene sequence:
>978_bases ATGGCGGCGAAAACCATGGACTTCGCGGGACCGGCGGTCTCGACCGGTTTGGGCGGCCTGGGGCCGACGCGGGTGTCGGG CGCGGCGCTGATGGCGACGCTGCTGTTCCTGGGGGCGCCGTTGTTGTTCGCGGGCAATATGCTGGCCGCCCGGATGATGC AGGGCGTGCTGCCGCCCTTCACCCTGGCGTCGGCGCGCTGGGCGCTGGCCGCCCTGGTGCTGCTGCCCTTTGTGCGCCGG GAGCTGTTTGGCCAGCGCCGCGCCGCCCCCGGGCGCTGGCGGGCTTTGGTGCTGCCGGCGGTGCTGGGCGGGGCGCTGAG CGTTGGTCCGCAGTATTGGGCGGCCCATTTCACCTCGGCGGGCAACATCGCCCTGGTCTTCGCCATGACGCCGTTGCTCG TCGCCCTGCTTGACCGGCTGGCCGGCGGGGCCCGCCTGGGCGCCCCGGCGCTGGCCGGCATGGGGCTGGCGATCGCCGGC ATCGCCACCGCCTCGTTCCAGGGCAGTCTGGCCCGGCTGCTGGCGTTCCAGATCAATCCCGGCGACCTTCTGGCCGGCCT TGCCGCTCTGGCCTGGGCCGGGTACACCGTGGCGACCCGCCGGCCGCGCGCCGGGCTGTCGGGGCTGGCCTTGCTATGGG GCGTCGCCGCCGGCGGCGCGCTGACCCTGGCGCCGGCCGCCGCCGTGGAATGGCTGGTGCTGGGCGTGCCAAGCCTTAGC CGCGAGGCGGTGCTTGGCGTGGCTTTCCTGGCGATCGTTCCCAGTATCGGCGCCTATCTGGCCTATGGCCGGCTGATCGG GCTGGTCGGTCCGGTGGTCGCCGGAACCTCGATGTATCTGATCCCGCTCTATGCCCTGGCCCTTGGCGCGATGGTGCTGG GCGAAGCCTTGGGTCGCTATCATCTGGCCGCCGCCGCCCTGGTGATCGGCGGCGTGGCGCTGTCGCGTTGGCGTGGGGCA GCGAAAGTGTGCGGGTGA
Upstream 100 bases:
>100_bases CGGCATAGACTTTCTCTAGATCGTAAAGCAAGCGGTCGGCGCGTTCCCGTCCAGAGCGCTCGGACTTTGCTCACGGCGAC CCCGGTCGGAGGGAAAGACG
Downstream 100 bases:
>100_bases GTCGGCGAGGCCGGCCGCAGGGGCGCTTCTCAAGGAAAAATACGGCTAAATGCCCTGATCCGATTTCTCTTTGGACAACG GTATTCAAATAAGGCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MAAKTMDFAGPAVSTGLGGLGPTRVSGAALMATLLFLGAPLLFAGNMLAARMMQGVLPPFTLASARWALAALVLLPFVRR ELFGQRRAAPGRWRALVLPAVLGGALSVGPQYWAAHFTSAGNIALVFAMTPLLVALLDRLAGGARLGAPALAGMGLAIAG IATASFQGSLARLLAFQINPGDLLAGLAALAWAGYTVATRRPRAGLSGLALLWGVAAGGALTLAPAAAVEWLVLGVPSLS REAVLGVAFLAIVPSIGAYLAYGRLIGLVGPVVAGTSMYLIPLYALALGAMVLGEALGRYHLAAAALVIGGVALSRWRGA AKVCG
Sequences:
>Translated_325_residues MAAKTMDFAGPAVSTGLGGLGPTRVSGAALMATLLFLGAPLLFAGNMLAARMMQGVLPPFTLASARWALAALVLLPFVRR ELFGQRRAAPGRWRALVLPAVLGGALSVGPQYWAAHFTSAGNIALVFAMTPLLVALLDRLAGGARLGAPALAGMGLAIAG IATASFQGSLARLLAFQINPGDLLAGLAALAWAGYTVATRRPRAGLSGLALLWGVAAGGALTLAPAAAVEWLVLGVPSLS REAVLGVAFLAIVPSIGAYLAYGRLIGLVGPVVAGTSMYLIPLYALALGAMVLGEALGRYHLAAAALVIGGVALSRWRGA AKVCG >Mature_324_residues AAKTMDFAGPAVSTGLGGLGPTRVSGAALMATLLFLGAPLLFAGNMLAARMMQGVLPPFTLASARWALAALVLLPFVRRE LFGQRRAAPGRWRALVLPAVLGGALSVGPQYWAAHFTSAGNIALVFAMTPLLVALLDRLAGGARLGAPALAGMGLAIAGI ATASFQGSLARLLAFQINPGDLLAGLAALAWAGYTVATRRPRAGLSGLALLWGVAAGGALTLAPAAAVEWLVLGVPSLSR EAVLGVAFLAIVPSIGAYLAYGRLIGLVGPVVAGTSMYLIPLYALALGAMVLGEALGRYHLAAAALVIGGVALSRWRGAA KVCG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32750; Mature: 32618
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKTMDFAGPAVSTGLGGLGPTRVSGAALMATLLFLGAPLLFAGNMLAARMMQGVLPPF CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH TLASARWALAALVLLPFVRRELFGQRRAAPGRWRALVLPAVLGGALSVGPQYWAAHFTSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCC GNIALVFAMTPLLVALLDRLAGGARLGAPALAGMGLAIAGIATASFQGSLARLLAFQINP CCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GDLLAGLAALAWAGYTVATRRPRAGLSGLALLWGVAAGGALTLAPAAAVEWLVLGVPSLS HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCC REAVLGVAFLAIVPSIGAYLAYGRLIGLVGPVVAGTSMYLIPLYALALGAMVLGEALGRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HLAAAALVIGGVALSRWRGAAKVCG HHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure AAKTMDFAGPAVSTGLGGLGPTRVSGAALMATLLFLGAPLLFAGNMLAARMMQGVLPPF CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH TLASARWALAALVLLPFVRRELFGQRRAAPGRWRALVLPAVLGGALSVGPQYWAAHFTSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCC GNIALVFAMTPLLVALLDRLAGGARLGAPALAGMGLAIAGIATASFQGSLARLLAFQINP CCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GDLLAGLAALAWAGYTVATRRPRAGLSGLALLWGVAAGGALTLAPAAAVEWLVLGVPSLS HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCC REAVLGVAFLAIVPSIGAYLAYGRLIGLVGPVVAGTSMYLIPLYALALGAMVLGEALGRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HLAAAALVIGGVALSRWRGAAKVCG HHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA