Click here to switch to the map view.

The map label for this gene is 83594236

Identifier: 83594236

GI number: 83594236

Start: 3348294

End: 3348701

Strand: Reverse

Name: 83594236

Synonym: Rru_A2904

Alternate gene names: NA

Gene position: 3348701-3348294 (Counterclockwise)

Preceding gene: 83594237

Following gene: 83594232

Centisome position: 76.93

GC content: 64.71

Gene sequence:

>408_bases
ATGCTGGAAAAGGGGGTCGATGCCGATGTTCTGCGGGACATGATCGGCTTTGCCGCGCACCGTCTGATGGAGTTGGAGGT
GCAGGCCCGTACCGGGGCGGCTCTGGGGGAGCGCTCGCCGGACCGGCTGGCGCAGCGCAACGGGTACCGGGATCGCGATT
GGGAAACCCGGGCCGGGACCGTGGAGTTGCGCATCCCGAAGGTGCGCAAGGGAAGCTATTTCCCTGGGTTCCTGGAGCCC
CGGAGGATGGCCGAGAAGGCTCTGACCGCCGTGATCCAGGAGGCCTACATCCAGGGTATTTCCACCCGTTCGGTCGATGA
TCTGGTGCAGGCTATGGGGATGTCGGGGGTGTCCAAAAGCCAAGTCAGCCGGGACTGTCAGGAATTTCGTGTGCGGGCGG
GCGGTTGA

Upstream 100 bases:

>100_bases
CAGGGGCGGTCATCGTGGATCTTCGGTAAAGTTTGGTCACCACAACAAAACCCCAACCGAGGGTGACCACGATGACCGAC
GAGAGGGGGCACTGCGCACG

Downstream 100 bases:

>100_bases
ACATTACGGCGCCCATGGGCGCGGTCAAGCGATTCCGCGAAAATGAGTCTGCCCCCTTTTCGCGTTCAAGATAACTACCG
TGAATACCTAGCAGCCTTGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLEKGVDADVLRDMIGFAAHRLMELEVQARTGAALGERSPDRLAQRNGYRDRDWETRAGTVELRIPKVRKGSYFPGFLEP
RRMAEKALTAVIQEAYIQGISTRSVDDLVQAMGMSGVSKSQVSRDCQEFRVRAGG

Sequences:

>Translated_135_residues
MLEKGVDADVLRDMIGFAAHRLMELEVQARTGAALGERSPDRLAQRNGYRDRDWETRAGTVELRIPKVRKGSYFPGFLEP
RRMAEKALTAVIQEAYIQGISTRSVDDLVQAMGMSGVSKSQVSRDCQEFRVRAGG
>Mature_135_residues
MLEKGVDADVLRDMIGFAAHRLMELEVQARTGAALGERSPDRLAQRNGYRDRDWETRAGTVELRIPKVRKGSYFPGFLEP
RRMAEKALTAVIQEAYIQGISTRSVDDLVQAMGMSGVSKSQVSRDCQEFRVRAGG

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 15059; Mature: 15059

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKGVDADVLRDMIGFAAHRLMELEVQARTGAALGERSPDRLAQRNGYRDRDWETRAGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCE
VELRIPKVRKGSYFPGFLEPRRMAEKALTAVIQEAYIQGISTRSVDDLVQAMGMSGVSKS
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
QVSRDCQEFRVRAGG
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEKGVDADVLRDMIGFAAHRLMELEVQARTGAALGERSPDRLAQRNGYRDRDWETRAGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCE
VELRIPKVRKGSYFPGFLEPRRMAEKALTAVIQEAYIQGISTRSVDDLVQAMGMSGVSKS
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
QVSRDCQEFRVRAGG
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]