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The map label for this gene is aer [C]

Identifier: 83594106

GI number: 83594106

Start: 3207633

End: 3209822

Strand: Reverse

Name: aer [C]

Synonym: Rru_A2774

Alternate gene names: 83594106

Gene position: 3209822-3207633 (Counterclockwise)

Preceding gene: 83594107

Following gene: 83594104

Centisome position: 73.74

GC content: 65.62

Gene sequence:

>2190_bases
ATGACACAGACAGGCAAGCGGTCGGCGACGGCCGGCGGGATCCGCTTTGGTATCGGCAAGCGGATCCTGACGTCTTTTCT
GGCGGTGGCGGCGATCACCGTCGGTCTGTCGGTGCTCGCCTGGACCAGCCTGGATCAGTCGCGCAAGGATTACGGCGCCC
TGGTCGACGACAGCCTTCCCGCGGTCAAGGACGCCCTGGAACTGGCGCGCAGCAGCGTCGTGCTGACCAGCATGGCGCCG
ATGCTCCAGGCCGTGCGCAGCGACGACGAGCGCAAGAGGATTTTCGATGACCTCCGCGGCTCCCATCAGGCCCTTGATCA
GCGCATCACCGATCTGGCCGCCCGCGTCGATCGTCCCGAGATCATCGCCGGCCTGCGCAAGACCGCCGAGGAGATGCGAA
CCACCCTTGATCGCCTGAACGGCATCGCCCAATCGATGCTGGGGACCGAGGCGGTGATGATCGAGGATACGAAAACCATT
CGCGGCCTTGAAACCGGCTTCGCCGCCGCGGCGCGCAAACTGGCCGGCAGCGCCAAGATCGAGGTGGTTCTGGGCGCCCG
CAAACTGGCCAATATGATCGAATTGCTCCAGGCCGATCAAACGGTGACCGGGGCGGCCGAGGTGGCCAAGGCCGGCGAAC
AGGCGACCCAGGCCTTTGAGGCCAGCTTGCGCATCAGTGCCGATGCCGTGCGCTCGCTCAGCATTCTGGCCCAGGCCCAG
CGCGCCCCCGATCTGGAAACCCTGTCGAGCCTGGAAAGCGCCTTCAAATCGGGCATGGCCTCGGTCTCGTCGCAGCTAAG
CCGGCTGAAATCGGCCAATGTCGATGCCGATCAGCTCGCCCAGCTGCAAAGGCTGTTCGACGATACGATGATGCTGGGCG
ACGAAATGCCCAGCCTGTTCGACCGTCGGGCCAGCGCCCTGACCCAGGTTGGCATGGCCAACGATCTGGTCGAGGAGAGC
CGGGCGATCGCCGAGCGCCTGGGCATCCTGGTCAATAACTTGGTTGGCGCCGTCGATGGCGATATCGCGACCACTGTCGA
AATCAGCGAGGCCCGGGCCAAAACCACCGTCATCATCCAGTGGTCGGTCGCCGGCCTTGCCGTGTTGATCACCGTGTTGA
TCGGCTGGTGGTATGTGGGCAAGCGGATCATCGGCCGTTTGCTGCGGCTGGCCACGGCGATGGATCGCATCGCCGGCGGT
GATCTTGATACGGCGATTCCCGATCAGGGCAACGACGAGATCAGCCAGATGGCGCGCACGGTCGCCGTATTCCGCGATAC
CGCCCGCGAGGCCCGCGAGGCCGAGCGGCGGGTGGCCGAGGAACGCGAGCGGGCGGCCCGGTTGAAGCGCGAGGGTGAAT
TGTCGCTGGCCGACGCCTTCGATCAATCGGTGGGGCAGACCGTGCAGGATCTGGGCGGGGCGGCGCAGACGGCGGCCGAA
CGCGCCGATACCATGGACCAACTGGCGCGCGCCGTGATGGACGAGAACCGCGGCGTCGCCCAGACCTCGGAGGAGATGTC
GGGCCAGACCCAGGCGGTGGCGGCGGCGGTCGAGGAGCTGGATTCGGCGATCGAGGAGATTTTGCGCCAGACCACCGGAT
CATCGGAAGTGTCGGGCAGCGCGGTGCGCGAGGCCGAAGCGATGCGCGCCGTCATGGACTCGCTCAACGACGGTTCGGGA
CGGATTGGCGAGATCATCGGCCTGATCGAACAGGTGGCGGCCCAGACCAATCTTCTGGCGATGAACGCCACCATCGAAGC
CGCCCATGCCGGCAACGCCGGCAAGGGATTCGCCGTGGTGGCGAGCGAGGTCAAGAACCTTGCCCACCAGTCCAGCCAGT
CGGCCGATGATATCCGCAAGCAGATCGCCAAGATCCGCGCCGATGTGGAAAACGCCGTTTCGGCGACCGGCCGGCTGACC
GATATCATCCGGCGCAACGACGAGATCGTCGCCGGCATCGCCAGTTCGGTGGAACAGCAAAGCGCCGCCACCCGCGAAAT
CAGCCGCAATGTGCAGATGGTGGCCGAAGGCGTGCGCCATATTTCTTCAAGCGTCACCCTGGTCTCGGATGTCTCCGAAC
GCTCGGGCAAGGCGGCCGCCGAGGTTCTGGCGGCGTCACAGGCCATGCGCGGTCAGGTTGGCGTCATCACCGGCGAGATC
GATTCCTTCCTGAGTGGCATTCGCGCCTAA

Upstream 100 bases:

>100_bases
GGTTCACCTGCCGGTTGACGGGTTCCAGACGATGGCGTATCGGGCGTGATCGGGTTTTTCAACCGGGACGGCGCATGCCA
CCGGGGGCGTGGGGATTGGC

Downstream 100 bases:

>100_bases
GGTCCTTGGCGGGCCGAACCGCCTTACTTACATGATTCCGGCAAGGCGGCGTCGGCGCAGCTCGGTCAGGTTGAACTCGA
CGGCGGCGGCGCCCAAAGGC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 729; Mature: 728

Protein sequence:

>729_residues
MTQTGKRSATAGGIRFGIGKRILTSFLAVAAITVGLSVLAWTSLDQSRKDYGALVDDSLPAVKDALELARSSVVLTSMAP
MLQAVRSDDERKRIFDDLRGSHQALDQRITDLAARVDRPEIIAGLRKTAEEMRTTLDRLNGIAQSMLGTEAVMIEDTKTI
RGLETGFAAAARKLAGSAKIEVVLGARKLANMIELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQ
RAPDLETLSSLESAFKSGMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLFDRRASALTQVGMANDLVEES
RAIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQWSVAGLAVLITVLIGWWYVGKRIIGRLLRLATAMDRIAGG
DLDTAIPDQGNDEISQMARTVAVFRDTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAE
RADTMDQLARAVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVSGSAVREAEAMRAVMDSLNDGSG
RIGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAGKGFAVVASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLT
DIIRRNDEIVAGIASSVEQQSAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQAMRGQVGVITGEI
DSFLSGIRA

Sequences:

>Translated_729_residues
MTQTGKRSATAGGIRFGIGKRILTSFLAVAAITVGLSVLAWTSLDQSRKDYGALVDDSLPAVKDALELARSSVVLTSMAP
MLQAVRSDDERKRIFDDLRGSHQALDQRITDLAARVDRPEIIAGLRKTAEEMRTTLDRLNGIAQSMLGTEAVMIEDTKTI
RGLETGFAAAARKLAGSAKIEVVLGARKLANMIELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQ
RAPDLETLSSLESAFKSGMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLFDRRASALTQVGMANDLVEES
RAIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQWSVAGLAVLITVLIGWWYVGKRIIGRLLRLATAMDRIAGG
DLDTAIPDQGNDEISQMARTVAVFRDTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAE
RADTMDQLARAVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVSGSAVREAEAMRAVMDSLNDGSG
RIGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAGKGFAVVASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLT
DIIRRNDEIVAGIASSVEQQSAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQAMRGQVGVITGEI
DSFLSGIRA
>Mature_728_residues
TQTGKRSATAGGIRFGIGKRILTSFLAVAAITVGLSVLAWTSLDQSRKDYGALVDDSLPAVKDALELARSSVVLTSMAPM
LQAVRSDDERKRIFDDLRGSHQALDQRITDLAARVDRPEIIAGLRKTAEEMRTTLDRLNGIAQSMLGTEAVMIEDTKTIR
GLETGFAAAARKLAGSAKIEVVLGARKLANMIELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQR
APDLETLSSLESAFKSGMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLFDRRASALTQVGMANDLVEESR
AIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQWSVAGLAVLITVLIGWWYVGKRIIGRLLRLATAMDRIAGGD
LDTAIPDQGNDEISQMARTVAVFRDTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAER
ADTMDQLARAVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVSGSAVREAEAMRAVMDSLNDGSGR
IGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAGKGFAVVASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLTD
IIRRNDEIVAGIASSVEQQSAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQAMRGQVGVITGEID
SFLSGIRA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=273, Percent_Identity=31.1355311355311, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788194, Length=354, Percent_Identity=25.7062146892655, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI2367378, Length=317, Percent_Identity=26.813880126183, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787690, Length=368, Percent_Identity=27.445652173913, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI1788195, Length=298, Percent_Identity=28.5234899328859, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 77409; Mature: 77278

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS00579 RIBOSOMAL_L29 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTGKRSATAGGIRFGIGKRILTSFLAVAAITVGLSVLAWTSLDQSRKDYGALVDDSLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
AVKDALELARSSVVLTSMAPMLQAVRSDDERKRIFDDLRGSHQALDQRITDLAARVDRPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
IIAGLRKTAEEMRTTLDRLNGIAQSMLGTEAVMIEDTKTIRGLETGFAAAARKLAGSAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCE
EVVLGARKLANMIELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQ
EEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPDLETLSSLESAFKSGMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
DRRASALTQVGMANDLVEESRAIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCEEEEEE
WSVAGLAVLITVLIGWWYVGKRIIGRLLRLATAMDRIAGGDLDTAIPDQGNDEISQMART
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
VAVFRDTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
RADTMDQLARAVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVSGS
HHHHHHHHHHHHHHCCCCCHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AVREAEAMRAVMDSLNDGSGRIGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAGKGFAVV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEHHHCCCCCCCCHHHH
ASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLTDIIRRNDEIVAGIASSVEQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQAMRGQVGVITGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHH
DSFLSGIRA
HHHHHHHCC
>Mature Secondary Structure 
TQTGKRSATAGGIRFGIGKRILTSFLAVAAITVGLSVLAWTSLDQSRKDYGALVDDSLP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
AVKDALELARSSVVLTSMAPMLQAVRSDDERKRIFDDLRGSHQALDQRITDLAARVDRPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
IIAGLRKTAEEMRTTLDRLNGIAQSMLGTEAVMIEDTKTIRGLETGFAAAARKLAGSAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCE
EVVLGARKLANMIELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQ
EEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPDLETLSSLESAFKSGMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
DRRASALTQVGMANDLVEESRAIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCEEEEEE
WSVAGLAVLITVLIGWWYVGKRIIGRLLRLATAMDRIAGGDLDTAIPDQGNDEISQMART
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
VAVFRDTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
RADTMDQLARAVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVSGS
HHHHHHHHHHHHHHCCCCCHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AVREAEAMRAVMDSLNDGSGRIGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAGKGFAVV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEHHHCCCCCCCCHHHH
ASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLTDIIRRNDEIVAGIASSVEQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQAMRGQVGVITGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHH
DSFLSGIRA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]