| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gno [H]
Identifier: 83594079
GI number: 83594079
Start: 3180062
End: 3180823
Strand: Reverse
Name: gno [H]
Synonym: Rru_A2747
Alternate gene names: 83594079
Gene position: 3180823-3180062 (Counterclockwise)
Preceding gene: 83594080
Following gene: 83594078
Centisome position: 73.07
GC content: 72.18
Gene sequence:
>762_bases ATGGCCGCGTCGCTGTTCGATCTCGCCGGAAAAACCGCCCTGGTGACCGGGAGCAGCCGGGGGCTGGGGTTCGAGATGGC TTTGGCCTTGGCCCGGGCTGGCGCCTGGGTGGCCGTTCACGGGCGGGGCGGCGCGGACCTGGAACGGGCGGTGGCGGCCA TTCGGGCGGCGGGGGGCGCGGCCGAGGCGGTGGCTTTCGATCTGGGCGAGCCCGAGGCCGGCGCCGCCGCGCTCGAGGAG CTGACCGAGTCGTGGGGCGGCATCGATATCCTGGTCAATAACGCCGGGGCCCGCGATCGCCGACCCCTTGACGATCTTGA TCTGGCCGCCGTACGCCAACTGCTGGAGATCGATCTGCTCGCCCCCTTCGCCCTGTCGCGGCGCGCCGCCCAGGCCATGC CGGCCGGCGGGCGGATCATCAACATCACCTCGATCGCCGGTCAAGTGGCGCGGGCGGGCGATGCGGCCTATACCACGGCC AAGGGCGGGCTCGATGCCCTGACCCGGGCGCTCGCCGCCGAACTGGGGCCGCGCGGCATCACCGTGAATGCCATCGCGCC GGGCTATTTCGCCACGTCGGCCAATGCGGCGATGGTCGCCGATGCCGAAAACGAGCGCCACCTGGAGCGGCGCACCGCGC TCGGGCGCTGGGGCCAGCCGGCGGAAATCGCCGGAGCCGTGGTCTTCCTGGCCTCGCCGGCGGCGTCCTATGTCACCGGT CAGGTGTTGGCGGTCGACGGCGGCTACCTCGCCCATTTTTGA
Upstream 100 bases:
>100_bases GGGGTGGTGCGGTTTTAAGGCATTGGGGCTTGATCGGGGTGAAGGGGGCGCGGCTAATGCCCCCTTGGTCTTCCCTTATG TCCTGAGAAAGGTCCTCGCC
Downstream 100 bases:
>100_bases CCCGGCCGCGTTCGCTCTCCTTAAGGAGAGGGTGATTTAAAAGGGCGACGAATTAAGGCTGTCTTCATATCCTTCCCGCT ACACTCTCCCTGCCGTTGTC
Product: gluconate 5-dehydrogenase
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAASLFDLAGKTALVTGSSRGLGFEMALALARAGAWVAVHGRGGADLERAVAAIRAAGGAAEAVAFDLGEPEAGAAALEE LTESWGGIDILVNNAGARDRRPLDDLDLAAVRQLLEIDLLAPFALSRRAAQAMPAGGRIINITSIAGQVARAGDAAYTTA KGGLDALTRALAAELGPRGITVNAIAPGYFATSANAAMVADAENERHLERRTALGRWGQPAEIAGAVVFLASPAASYVTG QVLAVDGGYLAHF
Sequences:
>Translated_253_residues MAASLFDLAGKTALVTGSSRGLGFEMALALARAGAWVAVHGRGGADLERAVAAIRAAGGAAEAVAFDLGEPEAGAAALEE LTESWGGIDILVNNAGARDRRPLDDLDLAAVRQLLEIDLLAPFALSRRAAQAMPAGGRIINITSIAGQVARAGDAAYTTA KGGLDALTRALAAELGPRGITVNAIAPGYFATSANAAMVADAENERHLERRTALGRWGQPAEIAGAVVFLASPAASYVTG QVLAVDGGYLAHF >Mature_252_residues AASLFDLAGKTALVTGSSRGLGFEMALALARAGAWVAVHGRGGADLERAVAAIRAAGGAAEAVAFDLGEPEAGAAALEEL TESWGGIDILVNNAGARDRRPLDDLDLAAVRQLLEIDLLAPFALSRRAAQAMPAGGRIINITSIAGQVARAGDAAYTTAK GGLDALTRALAAELGPRGITVNAIAPGYFATSANAAMVADAENERHLERRTALGRWGQPAEIAGAVVFLASPAASYVTGQ VLAVDGGYLAHF
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=34.8360655737705, Blast_Score=130, Evalue=8e-31, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=38.6178861788618, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=34.8178137651822, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=34.2741935483871, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=32.6530612244898, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI59889578, Length=192, Percent_Identity=34.8958333333333, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI15277342, Length=272, Percent_Identity=31.25, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI20149619, Length=230, Percent_Identity=31.304347826087, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=30.6201550387597, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.6424870466321, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=29.4736842105263, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=32.0652173913043, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI32455239, Length=178, Percent_Identity=29.7752808988764, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI5031765, Length=178, Percent_Identity=29.7752808988764, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=211, Percent_Identity=30.8056872037915, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4503301, Length=247, Percent_Identity=27.9352226720648, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4504505, Length=210, Percent_Identity=33.8095238095238, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI38424085, Length=184, Percent_Identity=28.2608695652174, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI38348362, Length=183, Percent_Identity=28.4153005464481, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4758504, Length=265, Percent_Identity=27.9245283018868, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI40254986, Length=193, Percent_Identity=29.5336787564767, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=37.0967741935484, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=37.6923076923077, Blast_Score=147, Evalue=7e-37, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=40.8906882591093, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=37.007874015748, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=37.037037037037, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=37.8048780487805, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=36.6255144032922, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=32, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=31.9672131147541, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=28.0632411067194, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=29.0697674418605, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1786701, Length=189, Percent_Identity=33.8624338624339, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=32.4528301886792, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=33.739837398374, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=31.8725099601594, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=33.7209302325581, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17560150, Length=256, Percent_Identity=33.203125, Blast_Score=116, Evalue=9e-27, Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=33.1967213114754, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=32.0610687022901, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=32.421875, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=34.1085271317829, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=29.5546558704453, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=34.1085271317829, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=33.976833976834, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=33.8645418326693, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=31.6793893129771, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=29.296875, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=28.90625, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=30.2325581395349, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=31.6, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=30.6513409961686, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=31.1538461538462, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560332, Length=257, Percent_Identity=31.1284046692607, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=31.3207547169811, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=31.640625, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17536025, Length=259, Percent_Identity=30.1158301158301, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=29.1828793774319, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71982365, Length=205, Percent_Identity=30.2439024390244, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=31.9371727748691, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17561272, Length=250, Percent_Identity=30.8, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17507613, Length=209, Percent_Identity=27.7511961722488, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI32563809, Length=209, Percent_Identity=27.7511961722488, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=29.0196078431373, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=32.8282828282828, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI86565303, Length=278, Percent_Identity=26.978417266187, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=26.8939393939394, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555612, Length=262, Percent_Identity=30.9160305343511, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=27.0833333333333, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=30.078125, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=35.8974358974359, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322067, Length=182, Percent_Identity=29.1208791208791, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=32.9317269076305, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=34.2741935483871, Blast_Score=127, Evalue=7e-30, Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=34.5381526104418, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=33.1983805668016, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI21355319, Length=264, Percent_Identity=32.1969696969697, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI21357041, Length=244, Percent_Identity=32.7868852459016, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24639444, Length=258, Percent_Identity=34.4961240310078, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=32.0987654320988, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=31.413612565445, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=28.4263959390863, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24649181, Length=201, Percent_Identity=29.8507462686567, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859837, Length=189, Percent_Identity=35.978835978836, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580925, Length=200, Percent_Identity=30.5, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=28.735632183908, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 25669; Mature: 25538
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASLFDLAGKTALVTGSSRGLGFEMALALARAGAWVAVHGRGGADLERAVAAIRAAGGA CCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC AEAVAFDLGEPEAGAAALEELTESWGGIDILVNNAGARDRRPLDDLDLAAVRQLLEIDLL CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH APFALSRRAAQAMPAGGRIINITSIAGQVARAGDAAYTTAKGGLDALTRALAAELGPRGI CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCE TVNAIAPGYFATSANAAMVADAENERHLERRTALGRWGQPAEIAGAVVFLASPAASYVTG EEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCCHHHHCC QVLAVDGGYLAHF EEEEECCCEEECC >Mature Secondary Structure AASLFDLAGKTALVTGSSRGLGFEMALALARAGAWVAVHGRGGADLERAVAAIRAAGGA CCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC AEAVAFDLGEPEAGAAALEELTESWGGIDILVNNAGARDRRPLDDLDLAAVRQLLEIDLL CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH APFALSRRAAQAMPAGGRIINITSIAGQVARAGDAAYTTAKGGLDALTRALAAELGPRGI CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCE TVNAIAPGYFATSANAAMVADAENERHLERRTALGRWGQPAEIAGAVVFLASPAASYVTG EEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCCHHHHCC QVLAVDGGYLAHF EEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]