| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594077
Identifier: 83594077
GI number: 83594077
Start: 3177571
End: 3178707
Strand: Reverse
Name: 83594077
Synonym: Rru_A2745
Alternate gene names: NA
Gene position: 3178707-3177571 (Counterclockwise)
Preceding gene: 83594078
Following gene: 83594076
Centisome position: 73.03
GC content: 65.79
Gene sequence:
>1137_bases ATGACGCCGCCTTGCGCGGCGCCGCGCCCGGGGGGCAGGCCGCTGACCCGGGGGGCGGCGATCTTGATCTTTCCCTTTGG GAATTCGGTCAGTCTTGATCTTTACGCCGAGGCGACGGGGCGGGGGCGCCGGGTAATCTGCGCCTCGTCGCTGGCCTTCG ATCCGGCCCGCGATCTCTGCACGCGGGGAGTTTGGCTGCCCTATTATTCCGATCCCGACTTCGAGGATCATCTGACATCC CTGATCGCCCGCGAGGGCATCGGCGAGATCGTCTGTCCCCATGCGGTTGTCTGGCGGGCCCTGAAGGAACGCCTTCCCGG CTTCGCTCCGGGGGTGGCCTTGCGCGAAACCGATGGCTGGCAGCGCCCCTTCTCCGGCCATCGGGTGGCCGATCTGCTGG TGGCCAGCCATCATCCGGGCGCCCTGGCCGCCAGCGGAACACCGGCGGCCTTGTTGCCCGAGCATAAGCTGCGCGCGGTG TTCGCCCAGGCCCATGGCATTCCCGGCTGGTGCTCGAACGAAAAGATCAGCGCCTTGCTCGATGTCTTCCGCTGGATGCC CACCGGGGATGTGATCGAAATCGGGTCGTGGTGCGGTAAATCCGCCTTCGTTCTGGCCTTCCTGGCCCGCCATTACGCCA CCGGGGCGGTTTTATGTGTCGATCCCTGGCATGGGGCGGACATCATCCAGGAAAATCAGGCGATCAACGCCGCCATGGTC ACCTTCGACATGGACGAGATCTTTCGCGTCTTCTTGTCGACCATGACCCTGGTCGGTTCCGGCTTCGTGAACTATCGGCG CATGCCCTCGGCCGCCGCCGCCATTCCGGGAACCGCGCCCTTCAGCGTGACCAGCGCGGAATTCGGCGAGACCCTCTATC GCGGGCGGACGGCGTTGCTGCATATCGATGGCAATCACGACATTCCCAAGATCGAGGAAGACCTGCGCCTGTGGCTGCCC CGGCTGGTGCCGGGGGGCTGGCTGGTGATGGATGACTATGTCCACGCCTGGGGCGATGGGCCGCGGATCATCGCCGACCG CTTCGTCGAGGAGCATTGGCGATCGCTGGACTGCGTCTTTGTGCGCGGCGGCGCCTTGTTCGTCAGGCTGATGGCGGAGG GGGCGTCATGCGCGTAG
Upstream 100 bases:
>100_bases GCCTGAGCGACAGCATCCTCAGCCTTCCCTTGAGCGCCTGCCTGAGCGATGAGGATGTCGAGCGGGTCTGCGAGCGGCTG ATCGACGCGGTGGCGCCGTC
Downstream 100 bases:
>100_bases GCATTATCCAGTCGTGCTATCTGCCGTGGCGCGGCTATTTCGATTTCATCGCCAGCGTTGATTTGTTTTTGATTTTTGAT GAGGTGCAACTGCCCAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTPPCAAPRPGGRPLTRGAAILIFPFGNSVSLDLYAEATGRGRRVICASSLAFDPARDLCTRGVWLPYYSDPDFEDHLTS LIAREGIGEIVCPHAVVWRALKERLPGFAPGVALRETDGWQRPFSGHRVADLLVASHHPGALAASGTPAALLPEHKLRAV FAQAHGIPGWCSNEKISALLDVFRWMPTGDVIEIGSWCGKSAFVLAFLARHYATGAVLCVDPWHGADIIQENQAINAAMV TFDMDEIFRVFLSTMTLVGSGFVNYRRMPSAAAAIPGTAPFSVTSAEFGETLYRGRTALLHIDGNHDIPKIEEDLRLWLP RLVPGGWLVMDDYVHAWGDGPRIIADRFVEEHWRSLDCVFVRGGALFVRLMAEGASCA
Sequences:
>Translated_378_residues MTPPCAAPRPGGRPLTRGAAILIFPFGNSVSLDLYAEATGRGRRVICASSLAFDPARDLCTRGVWLPYYSDPDFEDHLTS LIAREGIGEIVCPHAVVWRALKERLPGFAPGVALRETDGWQRPFSGHRVADLLVASHHPGALAASGTPAALLPEHKLRAV FAQAHGIPGWCSNEKISALLDVFRWMPTGDVIEIGSWCGKSAFVLAFLARHYATGAVLCVDPWHGADIIQENQAINAAMV TFDMDEIFRVFLSTMTLVGSGFVNYRRMPSAAAAIPGTAPFSVTSAEFGETLYRGRTALLHIDGNHDIPKIEEDLRLWLP RLVPGGWLVMDDYVHAWGDGPRIIADRFVEEHWRSLDCVFVRGGALFVRLMAEGASCA >Mature_377_residues TPPCAAPRPGGRPLTRGAAILIFPFGNSVSLDLYAEATGRGRRVICASSLAFDPARDLCTRGVWLPYYSDPDFEDHLTSL IAREGIGEIVCPHAVVWRALKERLPGFAPGVALRETDGWQRPFSGHRVADLLVASHHPGALAASGTPAALLPEHKLRAVF AQAHGIPGWCSNEKISALLDVFRWMPTGDVIEIGSWCGKSAFVLAFLARHYATGAVLCVDPWHGADIIQENQAINAAMVT FDMDEIFRVFLSTMTLVGSGFVNYRRMPSAAAAIPGTAPFSVTSAEFGETLYRGRTALLHIDGNHDIPKIEEDLRLWLPR LVPGGWLVMDDYVHAWGDGPRIIADRFVEEHWRSLDCVFVRGGALFVRLMAEGASCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41225; Mature: 41093
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPCAAPRPGGRPLTRGAAILIFPFGNSVSLDLYAEATGRGRRVICASSLAFDPARDLC CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHH TRGVWLPYYSDPDFEDHLTSLIAREGIGEIVCPHAVVWRALKERLPGFAPGVALRETDGW HCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCC QRPFSGHRVADLLVASHHPGALAASGTPAALLPEHKLRAVFAQAHGIPGWCSNEKISALL CCCCCCCHHHHHHEECCCCCCEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH DVFRWMPTGDVIEIGSWCGKSAFVLAFLARHYATGAVLCVDPWHGADIIQENQAINAAMV HHHHHCCCCCEEECCHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCEEEE TFDMDEIFRVFLSTMTLVGSGFVNYRRMPSAAAAIPGTAPFSVTSAEFGETLYRGRTALL EECHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCEECHHHHHHHHHCCCEEEE HIDGNHDIPKIEEDLRLWLPRLVPGGWLVMDDYVHAWGDGPRIIADRFVEEHWRSLDCVF EECCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHCCCEEEE VRGGALFVRLMAEGASCA EECCHHEEHHHHCCCCCC >Mature Secondary Structure TPPCAAPRPGGRPLTRGAAILIFPFGNSVSLDLYAEATGRGRRVICASSLAFDPARDLC CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHH TRGVWLPYYSDPDFEDHLTSLIAREGIGEIVCPHAVVWRALKERLPGFAPGVALRETDGW HCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCC QRPFSGHRVADLLVASHHPGALAASGTPAALLPEHKLRAVFAQAHGIPGWCSNEKISALL CCCCCCCHHHHHHEECCCCCCEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH DVFRWMPTGDVIEIGSWCGKSAFVLAFLARHYATGAVLCVDPWHGADIIQENQAINAAMV HHHHHCCCCCEEECCHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCEEEE TFDMDEIFRVFLSTMTLVGSGFVNYRRMPSAAAAIPGTAPFSVTSAEFGETLYRGRTALL EECHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCEECHHHHHHHHHCCCEEEE HIDGNHDIPKIEEDLRLWLPRLVPGGWLVMDDYVHAWGDGPRIIADRFVEEHWRSLDCVF EECCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHCCCEEEE VRGGALFVRLMAEGASCA EECCHHEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA