| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594063
Identifier: 83594063
GI number: 83594063
Start: 3158038
End: 3158682
Strand: Direct
Name: 83594063
Synonym: Rru_A2731
Alternate gene names: NA
Gene position: 3158038-3158682 (Clockwise)
Preceding gene: 83594061
Following gene: 83594064
Centisome position: 72.55
GC content: 73.64
Gene sequence:
>645_bases ATGCCCCATCCCCTTCCCCGGACGACACCCGCGCCCTCGGCCGCCCGGACGCTGGCCGGTCTGCGACGGCTGCCGGGAGC GCGGGGGCCGACCTTGGGCGCCGTCGCCGATCACCTGTCGGACCGGGCGATTCCCCTGCTGCTGCTGTTCCTCGGGCTCG CGGCCTTCGTGCCGACACCCGGCTTGCCGGTGGGCATGATCACCGGCAGCGCCTGCGCCGTGGTCGCCTTCGCCGCCCTG ATCCGCCCCGGGGAAAGCCGGCCGGCCCTGCCCGGCTGGCTGTCGCGCAAACCCCTGCCCCGCCGCGTCCTTCATGGCGT GCTGCGCCGCGCCGTGCCGCTCTTGCGCTGGCTGGAACGGCGCCTGCGCCCGCGTCTTTCCGGGCTGGCGCTGGGGGCCG GCCTGGGGTTAGCCTATGGCATGGTGGTGGTTCACGCCGCCCTGGTGGCCCTGCCCATTCCCTTTGGCAATACCCTGCCG GCCTTGGCGATCATCTTGATCGCCCTGGGGATTTTGGCCCGCGACGGCCTGATGGTCCTGGTCGGCCATGGCGTCGGCCT CGCCTGGATCGCCATCTTGGCCGGAGTCGGCCGTTGGCTGGCCGGGGCGCTGGCCGGCGAGCCGGCGGCGACCTTTGGGC AATAG
Upstream 100 bases:
>100_bases GTCGCCAGGGCGTTCGGCCAAATCAGCGGAACGGACGACGGGCACGATCATTGATCGGCGGCCTGGTCCCGTCCCCGGCC CGCCCGTCAAGGAGCCCGCG
Downstream 100 bases:
>100_bases GCGAAAACGCCTCGGGCCTTGACAGCGGGCCCGCCATGGTAAGAGTCACGCCTTTCCAAACCAAACCGGGGAACACAACG GCGCAATGACCGTCAGTATC
Product: exopolysaccharide synthesis, ExoD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPHPLPRTTPAPSAARTLAGLRRLPGARGPTLGAVADHLSDRAIPLLLLFLGLAAFVPTPGLPVGMITGSACAVVAFAAL IRPGESRPALPGWLSRKPLPRRVLHGVLRRAVPLLRWLERRLRPRLSGLALGAGLGLAYGMVVVHAALVALPIPFGNTLP ALAIILIALGILARDGLMVLVGHGVGLAWIAILAGVGRWLAGALAGEPAATFGQ
Sequences:
>Translated_214_residues MPHPLPRTTPAPSAARTLAGLRRLPGARGPTLGAVADHLSDRAIPLLLLFLGLAAFVPTPGLPVGMITGSACAVVAFAAL IRPGESRPALPGWLSRKPLPRRVLHGVLRRAVPLLRWLERRLRPRLSGLALGAGLGLAYGMVVVHAALVALPIPFGNTLP ALAIILIALGILARDGLMVLVGHGVGLAWIAILAGVGRWLAGALAGEPAATFGQ >Mature_213_residues PHPLPRTTPAPSAARTLAGLRRLPGARGPTLGAVADHLSDRAIPLLLLFLGLAAFVPTPGLPVGMITGSACAVVAFAALI RPGESRPALPGWLSRKPLPRRVLHGVLRRAVPLLRWLERRLRPRLSGLALGAGLGLAYGMVVVHAALVALPIPFGNTLPA LAIILIALGILARDGLMVLVGHGVGLAWIAILAGVGRWLAGALAGEPAATFGQ
Specific function: Unknown
COG id: COG3932
COG function: function code R; Uncharacterized ABC-type transport system, permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22056; Mature: 21925
Theoretical pI: Translated: 12.59; Mature: 12.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPLPRTTPAPSAARTLAGLRRLPGARGPTLGAVADHLSDRAIPLLLLFLGLAAFVPTP CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC GLPVGMITGSACAVVAFAALIRPGESRPALPGWLSRKPLPRRVLHGVLRRAVPLLRWLER CCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH RLRPRLSGLALGAGLGLAYGMVVVHAALVALPIPFGNTLPALAIILIALGILARDGLMVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEE VGHGVGLAWIAILAGVGRWLAGALAGEPAATFGQ EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PHPLPRTTPAPSAARTLAGLRRLPGARGPTLGAVADHLSDRAIPLLLLFLGLAAFVPTP CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC GLPVGMITGSACAVVAFAALIRPGESRPALPGWLSRKPLPRRVLHGVLRRAVPLLRWLER CCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH RLRPRLSGLALGAGLGLAYGMVVVHAALVALPIPFGNTLPALAIILIALGILARDGLMVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEE VGHGVGLAWIAILAGVGRWLAGALAGEPAATFGQ EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA