| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594061
Identifier: 83594061
GI number: 83594061
Start: 3156824
End: 3157387
Strand: Direct
Name: 83594061
Synonym: Rru_A2729
Alternate gene names: NA
Gene position: 3156824-3157387 (Clockwise)
Preceding gene: 83594058
Following gene: 83594063
Centisome position: 72.52
GC content: 71.63
Gene sequence:
>564_bases ATGTCCGCCGATGCCGACGATCTGTGGCGATTCGCCGTCGCCGTCCACGCCCGTGCCGGGGTGGAAAACGCCTGCCTCGC CCTTCAGGATGAAGCCGGGGCCGATGTCCCCTTGTTGTTGTTCGCCGCCTGGGCGGCGGCTCGACGCGGCGTCGTCCTTC CGGCGGAAACCCTGGCCGATCTTGATAGCAGGCTAGTGCCCTGGCGGGAAACCGTCATCCGGCCGCTGCGCACGGTCCGC CGGACGATGAAAGGCGCGCCGCCGCCCCATCGCGATCTGGAGACCCCGGCGGCCGATCTGCGGGCGCGGTTGAAATCCGT GGAACTGGAAGCCGAACGTCTGGCCCTGGATGCCCTGGCCGCCCATGCCCGCCTCGACCCCCGCAACACCGCCAAGGCGA GCGACGCGCCGCCGCCGCGCGAAGCGATCTTGCAGGCCCTGCGCGCCGTGGTCGCCCTGCCGGCCGCCGGCGTGGCCGAT TCCTGGCGCGAGCGTCATCTGGCCGTGCTGACCGATGCCGCCCTCGCCCATAGCCCGCTCTCGGTGGCCGACGCCCTGTC TTGA
Upstream 100 bases:
>100_bases CTCCCCCGCCCGTCTCCCGCGGGTTTTCCGCGCCAGCCCGGCGCGGGTCCGTGGGGCGCGAGGGGGAGCGCCCGTACCCG CCCGCGTGAGGAGGTCCGCC
Downstream 100 bases:
>100_bases CCAAACGGCGCCACCCAAAAGCGCCTAGGCCAAAAACCATCGCCGCCGGGCTCAGCCGGCGCGGCGGACGCGGCTCAGGT GAAGGTAATCATACAGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSADADDLWRFAVAVHARAGVENACLALQDEAGADVPLLLFAAWAAARRGVVLPAETLADLDSRLVPWRETVIRPLRTVR RTMKGAPPPHRDLETPAADLRARLKSVELEAERLALDALAAHARLDPRNTAKASDAPPPREAILQALRAVVALPAAGVAD SWRERHLAVLTDAALAHSPLSVADALS
Sequences:
>Translated_187_residues MSADADDLWRFAVAVHARAGVENACLALQDEAGADVPLLLFAAWAAARRGVVLPAETLADLDSRLVPWRETVIRPLRTVR RTMKGAPPPHRDLETPAADLRARLKSVELEAERLALDALAAHARLDPRNTAKASDAPPPREAILQALRAVVALPAAGVAD SWRERHLAVLTDAALAHSPLSVADALS >Mature_186_residues SADADDLWRFAVAVHARAGVENACLALQDEAGADVPLLLFAAWAAARRGVVLPAETLADLDSRLVPWRETVIRPLRTVRR TMKGAPPPHRDLETPAADLRARLKSVELEAERLALDALAAHARLDPRNTAKASDAPPPREAILQALRAVVALPAAGVADS WRERHLAVLTDAALAHSPLSVADALS
Specific function: Unknown
COG id: COG5589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19993; Mature: 19862
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADADDLWRFAVAVHARAGVENACLALQDEAGADVPLLLFAAWAAARRGVVLPAETLAD CCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LDSRLVPWRETVIRPLRTVRRTMKGAPPPHRDLETPAADLRARLKSVELEAERLALDALA HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AHARLDPRNTAKASDAPPPREAILQALRAVVALPAAGVADSWRERHLAVLTDAALAHSPL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCH SVADALS HHHHHCC >Mature Secondary Structure SADADDLWRFAVAVHARAGVENACLALQDEAGADVPLLLFAAWAAARRGVVLPAETLAD CCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LDSRLVPWRETVIRPLRTVRRTMKGAPPPHRDLETPAADLRARLKSVELEAERLALDALA HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AHARLDPRNTAKASDAPPPREAILQALRAVVALPAAGVADSWRERHLAVLTDAALAHSPL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCH SVADALS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA