| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593972
Identifier: 83593972
GI number: 83593972
Start: 3069599
End: 3070711
Strand: Reverse
Name: 83593972
Synonym: Rru_A2640
Alternate gene names: NA
Gene position: 3070711-3069599 (Counterclockwise)
Preceding gene: 83593973
Following gene: 83593971
Centisome position: 70.55
GC content: 56.33
Gene sequence:
>1113_bases GTGGTAGTTCCAAAGCTGATAGTGACCGGGGATATTTTTCGTCCGTATCCGTCGGGACAGCGTCATGAAAGTGCCGTTTG GAAGAATGTACGCTGGCTGGACGGGATCGTCGGCACCGCGGCACGCCTCTCCGGTTGGACGGTAACAACGGCCTCCTGGG ATCCGCGCCTCCCGTCCCCTGCTATCTATATCGATACTCCGGCTATTTACGAGGCGTTTGGGATCCCTCTAACCATTGCG GGATGGGGAAAATTACTGAGCCAACCCTCCTGTCCGCCGGAAGTGGAAAGCCTTCTTATTGATGCCTTCGCGGCTGACCT CGTGGTTGGCTATGAAATGCCTGATCTTCTGCTGCGGTTGTTGGATCGTGCGGGGATAGCGGTGATCGATATTTCCCTCT ATCCGGTGCGTTTCCTTGATGACGTGGTCTTTGCGCTGCGCAGCAATCGTCCCGATATTCATGCCGTTTTGCTCCAGCAT GCCGTGCCCCGCGCCGAGATGCTGTTGCAAGCCGGATTGCTCAAAAGCAAAGCCGCCTGGATGGAGCCACCCCTGCGGCA GCCGTTGCGTCCGGGAACCACCGTGATCCTTGGTCAGGTCCCGGGCGATCGTGCCCTTCTCGACGGTGAGACCGGGCGAT TCCGATGCCTTGAAGATTATGCCGCGCAACTTCTCGATCTTTGTCTTAACTCTTCAATGGTTTTGTTCAAGCCGCACCCT TATGCCGCCGGACAATCGCAAACCAATAAAGTGATGAGTGAAATCGGGGCTGTGACTTGGGTGGATGCTAATGTTTATCA TCTTCTTGCTCAGCCCGAAGTAAGCACTGTTTGCGCACTGAATTCGAGTGTTTTGGTTGAGGCGGAGCTTTTCGGCAAGG ATGCGATATGGCTCGCCCCGCCGCTTTATCACTACGGTGATGAATTCCCTGCCGATGCGCGCTTCGGGGCGGCGGTCCCT CTCACTAGCGCTTGGTGCAACCCGGATTTTTGGAGTGCGCTTCGTGGCGAAAAACCAGACGAGTCGGTTGCTTTGACACC GCGACCCAACCGGCTGCGGCGGGCACTCAATGCTGATTGGGGCTTTTCCTCGATGGATAAGGTTGTCGCATGA
Upstream 100 bases:
>100_bases AAAAGATGACAATGGATGTGCGTTAAGTCCTGTTTTCGTAATTTCTAAGAGTTAATAGGAAATTTCTTTAAATAAGGACC TCTCTCTTGGAGAAAAATTC
Downstream 100 bases:
>100_bases TCGCAATGAAATGGCAGTCTGTTCTTGCTTCGCTAGAGCGGAGTGATTTCACGACGGCGGAAAGAGACGTGGATCAGGAG CTTGCCCATACGCCCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MVVPKLIVTGDIFRPYPSGQRHESAVWKNVRWLDGIVGTAARLSGWTVTTASWDPRLPSPAIYIDTPAIYEAFGIPLTIA GWGKLLSQPSCPPEVESLLIDAFAADLVVGYEMPDLLLRLLDRAGIAVIDISLYPVRFLDDVVFALRSNRPDIHAVLLQH AVPRAEMLLQAGLLKSKAAWMEPPLRQPLRPGTTVILGQVPGDRALLDGETGRFRCLEDYAAQLLDLCLNSSMVLFKPHP YAAGQSQTNKVMSEIGAVTWVDANVYHLLAQPEVSTVCALNSSVLVEAELFGKDAIWLAPPLYHYGDEFPADARFGAAVP LTSAWCNPDFWSALRGEKPDESVALTPRPNRLRRALNADWGFSSMDKVVA
Sequences:
>Translated_370_residues MVVPKLIVTGDIFRPYPSGQRHESAVWKNVRWLDGIVGTAARLSGWTVTTASWDPRLPSPAIYIDTPAIYEAFGIPLTIA GWGKLLSQPSCPPEVESLLIDAFAADLVVGYEMPDLLLRLLDRAGIAVIDISLYPVRFLDDVVFALRSNRPDIHAVLLQH AVPRAEMLLQAGLLKSKAAWMEPPLRQPLRPGTTVILGQVPGDRALLDGETGRFRCLEDYAAQLLDLCLNSSMVLFKPHP YAAGQSQTNKVMSEIGAVTWVDANVYHLLAQPEVSTVCALNSSVLVEAELFGKDAIWLAPPLYHYGDEFPADARFGAAVP LTSAWCNPDFWSALRGEKPDESVALTPRPNRLRRALNADWGFSSMDKVVA >Mature_370_residues MVVPKLIVTGDIFRPYPSGQRHESAVWKNVRWLDGIVGTAARLSGWTVTTASWDPRLPSPAIYIDTPAIYEAFGIPLTIA GWGKLLSQPSCPPEVESLLIDAFAADLVVGYEMPDLLLRLLDRAGIAVIDISLYPVRFLDDVVFALRSNRPDIHAVLLQH AVPRAEMLLQAGLLKSKAAWMEPPLRQPLRPGTTVILGQVPGDRALLDGETGRFRCLEDYAAQLLDLCLNSSMVLFKPHP YAAGQSQTNKVMSEIGAVTWVDANVYHLLAQPEVSTVCALNSSVLVEAELFGKDAIWLAPPLYHYGDEFPADARFGAAVP LTSAWCNPDFWSALRGEKPDESVALTPRPNRLRRALNADWGFSSMDKVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40605; Mature: 40605
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVPKLIVTGDIFRPYPSGQRHESAVWKNVRWLDGIVGTAARLSGWTVTTASWDPRLPSP CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC AIYIDTPAIYEAFGIPLTIAGWGKLLSQPSCPPEVESLLIDAFAADLVVGYEMPDLLLRL EEEECCCHHHHHHCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LDRAGIAVIDISLYPVRFLDDVVFALRSNRPDIHAVLLQHAVPRAEMLLQAGLLKSKAAW HHHCCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MEPPLRQPLRPGTTVILGQVPGDRALLDGETGRFRCLEDYAAQLLDLCLNSSMVLFKPHP CCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCC YAAGQSQTNKVMSEIGAVTWVDANVYHLLAQPEVSTVCALNSSVLVEAELFGKDAIWLAP CCCCCHHHHHHHHHHCCEEEECCCEEEEECCCCHHEEEECCCCEEEEEECCCCCCEEECC PLYHYGDEFPADARFGAAVPLTSAWCNPDFWSALRGEKPDESVALTPRPNRLRRALNADW CHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCC GFSSMDKVVA CCCHHHHHCC >Mature Secondary Structure MVVPKLIVTGDIFRPYPSGQRHESAVWKNVRWLDGIVGTAARLSGWTVTTASWDPRLPSP CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC AIYIDTPAIYEAFGIPLTIAGWGKLLSQPSCPPEVESLLIDAFAADLVVGYEMPDLLLRL EEEECCCHHHHHHCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LDRAGIAVIDISLYPVRFLDDVVFALRSNRPDIHAVLLQHAVPRAEMLLQAGLLKSKAAW HHHCCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MEPPLRQPLRPGTTVILGQVPGDRALLDGETGRFRCLEDYAAQLLDLCLNSSMVLFKPHP CCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCC YAAGQSQTNKVMSEIGAVTWVDANVYHLLAQPEVSTVCALNSSVLVEAELFGKDAIWLAP CCCCCHHHHHHHHHHCCEEEECCCEEEEECCCCHHEEEECCCCEEEEEECCCCCCEEECC PLYHYGDEFPADARFGAAVPLTSAWCNPDFWSALRGEKPDESVALTPRPNRLRRALNADW CHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCC GFSSMDKVVA CCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA