| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593920
Identifier: 83593920
GI number: 83593920
Start: 3008046
End: 3008549
Strand: Reverse
Name: 83593920
Synonym: Rru_A2588
Alternate gene names: NA
Gene position: 3008549-3008046 (Counterclockwise)
Preceding gene: 83593921
Following gene: 83593919
Centisome position: 69.12
GC content: 78.17
Gene sequence:
>504_bases ATGACCGATGGTCCCGCCGTCGATACCCCGCCGCCGCCCGATGAAACGCCCGACCTGCGCGCCGCCCTGGCCGAGCGCGA GGCCGAGGTGGCGGCCCTGAACGCCCGGCTGGCCGCCAGTCAGGCCCGCCTTGCCCAAGCCTCGGAGGCGCGGTTGCGCG CCGCCGTGCTGGAGGCCTGCGCCCGCGCCGGGGTGCGCGATCTGAGCCGCACCGATGTCTGCCGCGCCGCCCGCGAGGTC TTCACCCTATCGGACGGCCTGGAGGTCGTCGCCCTGCCGGGCGTCGAGGCGCCGGGCGGGCTGGACGGCTGGCTGGCCGG ATTGCGGCGGACCGGAGCGGCGGCATGGTGGGAGGTGGCGGCGGGGGCGGGGGCGCCGCCGGCCCGCGTCCCGGCCGATC CGCCCAATCCCTTCGCCCGCGACACCCTGGATCTGACCGAACAGGGCCGGCTGTTGCGCAGCCAGCCCGACCTGGCCGCC CGCCTGCGCGAGCGCGCCCGCTGA
Upstream 100 bases:
>100_bases GAATTGCAGCGCCGGGGCGTGCTGTCGCTGGCCTTCGATGCCCAGGCCGACGCCCTTGCGCCGTGACCTTTCCCGATCCA CCACCCCGGAGAGTGAAGCG
Downstream 100 bases:
>100_bases TCGGCTTTTTCAAGCCCCGTCCCCTCGCTAAGGAGAGCACCCATGCCGACGACCAGCACCCGTTTGTCCGATGTCATCGT CGCCGAGGTCTTTCAGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTDGPAVDTPPPPDETPDLRAALAEREAEVAALNARLAASQARLAQASEARLRAAVLEACARAGVRDLSRTDVCRAAREV FTLSDGLEVVALPGVEAPGGLDGWLAGLRRTGAAAWWEVAAGAGAPPARVPADPPNPFARDTLDLTEQGRLLRSQPDLAA RLRERAR
Sequences:
>Translated_167_residues MTDGPAVDTPPPPDETPDLRAALAEREAEVAALNARLAASQARLAQASEARLRAAVLEACARAGVRDLSRTDVCRAAREV FTLSDGLEVVALPGVEAPGGLDGWLAGLRRTGAAAWWEVAAGAGAPPARVPADPPNPFARDTLDLTEQGRLLRSQPDLAA RLRERAR >Mature_166_residues TDGPAVDTPPPPDETPDLRAALAEREAEVAALNARLAASQARLAQASEARLRAAVLEACARAGVRDLSRTDVCRAAREVF TLSDGLEVVALPGVEAPGGLDGWLAGLRRTGAAAWWEVAAGAGAPPARVPADPPNPFARDTLDLTEQGRLLRSQPDLAAR LRERAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17529; Mature: 17398
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGPAVDTPPPPDETPDLRAALAEREAEVAALNARLAASQARLAQASEARLRAAVLEAC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAGVRDLSRTDVCRAAREVFTLSDGLEVVALPGVEAPGGLDGWLAGLRRTGAAAWWEVA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHH AGAGAPPARVPADPPNPFARDTLDLTEQGRLLRSQPDLAARLRERAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCHHHHHHHHHCC >Mature Secondary Structure TDGPAVDTPPPPDETPDLRAALAEREAEVAALNARLAASQARLAQASEARLRAAVLEAC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAGVRDLSRTDVCRAAREVFTLSDGLEVVALPGVEAPGGLDGWLAGLRRTGAAAWWEVA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHH AGAGAPPARVPADPPNPFARDTLDLTEQGRLLRSQPDLAARLRERAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA