| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593919
Identifier: 83593919
GI number: 83593919
Start: 3006990
End: 3008003
Strand: Reverse
Name: 83593919
Synonym: Rru_A2587
Alternate gene names: NA
Gene position: 3008003-3006990 (Counterclockwise)
Preceding gene: 83593920
Following gene: 83593918
Centisome position: 69.1
GC content: 66.77
Gene sequence:
>1014_bases ATGCCGACGACCAGCACCCGTTTGTCCGATGTCATCGTCGCCGAGGTCTTTCAGCCCTATGTCATCGCCCGCGCCCTGGA GCTTGACGCCCTGATCCAGTCCGGGGTGGTGGTGCGCGATCCGCAGTTCGACGCCCTGGCCGGCGGTCCCGGGGCCAGCT TCAATTTGCCGTTCTTCAATGATCTCGATGGCGAGTCCAATGTGGGGTCGGACGATCCCGAAAGCTTCGCCGCCCCGGCC AAGCTGATCGCCGGGCGCGACGGCGCGGTCAAGCATGTGCGCAACAAATCGTGGTCGAGCATGGATCTGACCGCCGCCCT GCTGGCAAGCGATCCGGTGCGCGCCGTGGCCGATCTGGTGGCGCCGTTTTGGGTGCGCGATCGCCAGAAGGTGCTGGTCG CCAGTTTGGCCGGGGTGGTCGCCGACAATCTGGCCCATGATAACGGCGACATGGTCCATGACGTGTCGAGCGATGCCGCC GCCCCGGCGACCGCCGCCGAGTTGATCAGCGACGAGGCGGTGCTGGTCGCCGCCCAGACCCTGGGCGACATGAAAAGCCG CCTGAGCGCCATCGCCCTGCATTCGGTGGTTCACACCCGTTTGCAGCGGCTGGGCGCGCTGTTGCCCGTTCACGATCCGC AAACCGGCGATCTGCGCTACCACACCTATCTCGGCTACCGGGTGATCGTCGATGACGGCCTGCCGGTCAGCCGGGGGGCC AACCGGGTGGTCTATACCTCGTATCTGTTCGCCGATGGCGCCGTGGCCTATGGCGAGGGAACGCCCAAGCTGCCGGTGGA GACCGAGCGCGTTCCCGGGGCCGGCGATGGCGAGGGCATGGAGATCTTGCATACCCGCCGCCATTTCCTGCTCCATCCGC GCGGTATCCGCTGGATCGGCGCGGCGATGGCCAAAACCGCGCCCAGCAACGCCGAATTGGCCAATCCCGCCAATTGGGAC CGGGTCTACGCCCGCAAGGCGATCCGCTTCGCCGCGCTGCGCACCAACGGTTAA
Upstream 100 bases:
>100_bases CCGGCTGTTGCGCAGCCAGCCCGACCTGGCCGCCCGCCTGCGCGAGCGCGCCCGCTGATCGGCTTTTTCAAGCCCCGTCC CCTCGCTAAGGAGAGCACCC
Downstream 100 bases:
>100_bases GCGGCGATGACCGCCTCCTCCTCCCCCTGGCCCCGGCGGATGCTTGCCGGGGCCTCTCCCCGGGTGCGCTTCGCCGAGCT CGACCAGGATCTGGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Coat Protein; Phage-Related Minor Capsid Protein; Minor Capsid Protein; Phage-Like Coat Protein; Coat Protein; Prophage Lp1 Protein; Head Protein; SPP1 Phage Coat Protein P
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MPTTSTRLSDVIVAEVFQPYVIARALELDALIQSGVVVRDPQFDALAGGPGASFNLPFFNDLDGESNVGSDDPESFAAPA KLIAGRDGAVKHVRNKSWSSMDLTAALLASDPVRAVADLVAPFWVRDRQKVLVASLAGVVADNLAHDNGDMVHDVSSDAA APATAAELISDEAVLVAAQTLGDMKSRLSAIALHSVVHTRLQRLGALLPVHDPQTGDLRYHTYLGYRVIVDDGLPVSRGA NRVVYTSYLFADGAVAYGEGTPKLPVETERVPGAGDGEGMEILHTRRHFLLHPRGIRWIGAAMAKTAPSNAELANPANWD RVYARKAIRFAALRTNG
Sequences:
>Translated_337_residues MPTTSTRLSDVIVAEVFQPYVIARALELDALIQSGVVVRDPQFDALAGGPGASFNLPFFNDLDGESNVGSDDPESFAAPA KLIAGRDGAVKHVRNKSWSSMDLTAALLASDPVRAVADLVAPFWVRDRQKVLVASLAGVVADNLAHDNGDMVHDVSSDAA APATAAELISDEAVLVAAQTLGDMKSRLSAIALHSVVHTRLQRLGALLPVHDPQTGDLRYHTYLGYRVIVDDGLPVSRGA NRVVYTSYLFADGAVAYGEGTPKLPVETERVPGAGDGEGMEILHTRRHFLLHPRGIRWIGAAMAKTAPSNAELANPANWD RVYARKAIRFAALRTNG >Mature_336_residues PTTSTRLSDVIVAEVFQPYVIARALELDALIQSGVVVRDPQFDALAGGPGASFNLPFFNDLDGESNVGSDDPESFAAPAK LIAGRDGAVKHVRNKSWSSMDLTAALLASDPVRAVADLVAPFWVRDRQKVLVASLAGVVADNLAHDNGDMVHDVSSDAAA PATAAELISDEAVLVAAQTLGDMKSRLSAIALHSVVHTRLQRLGALLPVHDPQTGDLRYHTYLGYRVIVDDGLPVSRGAN RVVYTSYLFADGAVAYGEGTPKLPVETERVPGAGDGEGMEILHTRRHFLLHPRGIRWIGAAMAKTAPSNAELANPANWDR VYARKAIRFAALRTNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35972; Mature: 35841
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTSTRLSDVIVAEVFQPYVIARALELDALIQSGVVVRDPQFDALAGGPGASFNLPFFN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC DLDGESNVGSDDPESFAAPAKLIAGRDGAVKHVRNKSWSSMDLTAALLASDPVRAVADLV CCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH APFWVRDRQKVLVASLAGVVADNLAHDNGDMVHDVSSDAAAPATAAELISDEAVLVAAQT HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEHHHH LGDMKSRLSAIALHSVVHTRLQRLGALLPVHDPQTGDLRYHTYLGYRVIVDDGLPVSRGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC NRVVYTSYLFADGAVAYGEGTPKLPVETERVPGAGDGEGMEILHTRRHFLLHPRGIRWIG CEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHH AAMAKTAPSNAELANPANWDRVYARKAIRFAALRTNG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCC >Mature Secondary Structure PTTSTRLSDVIVAEVFQPYVIARALELDALIQSGVVVRDPQFDALAGGPGASFNLPFFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC DLDGESNVGSDDPESFAAPAKLIAGRDGAVKHVRNKSWSSMDLTAALLASDPVRAVADLV CCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH APFWVRDRQKVLVASLAGVVADNLAHDNGDMVHDVSSDAAAPATAAELISDEAVLVAAQT HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEHHHH LGDMKSRLSAIALHSVVHTRLQRLGALLPVHDPQTGDLRYHTYLGYRVIVDDGLPVSRGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC NRVVYTSYLFADGAVAYGEGTPKLPVETERVPGAGDGEGMEILHTRRHFLLHPRGIRWIG CEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHH AAMAKTAPSNAELANPANWDRVYARKAIRFAALRTNG HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA