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The map label for this gene is yfhF [C]

Identifier: 83593900

GI number: 83593900

Start: 2987874

End: 2988215

Strand: Reverse

Name: yfhF [C]

Synonym: Rru_A2568

Alternate gene names: 83593900

Gene position: 2988215-2987874 (Counterclockwise)

Preceding gene: 83593901

Following gene: 83593899

Centisome position: 68.65

GC content: 62.57

Gene sequence:

>342_bases
ATGGCTCTTCCCCCGCCGATCACCTTGACCGAGGCCGCCGTGGCCCGCATCAAGGCCCTGATGGCGCGCGCCGACAAGCC
GGTCGCCGGTCTGCGGGTCGGAGTCTCGACCAAGGGTTGTTCGGGGCTTTCCTATAAGATCGACTACGCCGAGGATGGAC
CGCGCCCCTTCGAAGAGGTGGTCAGCCAGGATGGGGCGACGGTCTTTCTGGAGTCCAACGCCGTGATGTTCCTGATCGGC
AGCCAGATGGACTTTAAACAAGACAAGCTGAGCGCCACCTTCTCGTTTGCCAATCCCAACGAGAAGGCGCGCTGCGGCTG
CGGCGAGAGCTTTTCCGTTTGA

Upstream 100 bases:

>100_bases
TGACCTGGGAACCGCCGTGGACGCCCGAGCGTATGTCCGAGGTCGCCCGCGTCGCCCTCGATATGTTTTAATCCAAGGCT
TAGCCGCCAGGAGGTCCCCC

Downstream 100 bases:

>100_bases
CGGGCGCGGGGGCGGCCGTTTGAAGAAGGATAAAGCGCTAGCATAAGGGGCCCGGCGTGATCGATACGACGACGATGATG
CTGGTGCTTGGACTGGGCAA

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MALPPPITLTEAAVARIKALMARADKPVAGLRVGVSTKGCSGLSYKIDYAEDGPRPFEEVVSQDGATVFLESNAVMFLIG
SQMDFKQDKLSATFSFANPNEKARCGCGESFSV

Sequences:

>Translated_113_residues
MALPPPITLTEAAVARIKALMARADKPVAGLRVGVSTKGCSGLSYKIDYAEDGPRPFEEVVSQDGATVFLESNAVMFLIG
SQMDFKQDKLSATFSFANPNEKARCGCGESFSV
>Mature_112_residues
ALPPPITLTEAAVARIKALMARADKPVAGLRVGVSTKGCSGLSYKIDYAEDGPRPFEEVVSQDGATVFLESNAVMFLIGS
QMDFKQDKLSATFSFANPNEKARCGCGESFSV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=108, Percent_Identity=50, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=42.9906542056075, Blast_Score=92, Evalue=5e-21,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=38.3177570093458, Blast_Score=79, Evalue=8e-17,
Organism=Escherichia coli, GI1786351, Length=108, Percent_Identity=31.4814814814815, Blast_Score=74, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25146411, Length=107, Percent_Identity=50.4672897196262, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=50.4672897196262, Blast_Score=113, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=44.8598130841121, Blast_Score=101, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=54.6296296296296, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12023; Mature: 11892

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPPPITLTEAAVARIKALMARADKPVAGLRVGVSTKGCSGLSYKIDYAEDGPRPFEEV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHH
VSQDGATVFLESNAVMFLIGSQMDFKQDKLSATFSFANPNEKARCGCGESFSV
HCCCCCEEEEECCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALPPPITLTEAAVARIKALMARADKPVAGLRVGVSTKGCSGLSYKIDYAEDGPRPFEEV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHH
VSQDGATVFLESNAVMFLIGSQMDFKQDKLSATFSFANPNEKARCGCGESFSV
HCCCCCEEEEECCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]