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The map label for this gene is adrA [H]

Identifier: 83593890

GI number: 83593890

Start: 2971307

End: 2972344

Strand: Reverse

Name: adrA [H]

Synonym: Rru_A2555

Alternate gene names: 83593890

Gene position: 2972344-2971307 (Counterclockwise)

Preceding gene: 83593891

Following gene: 83593889

Centisome position: 68.29

GC content: 64.35

Gene sequence:

>1038_bases
ATGGTTTTCGCTTTTCTCACGCCCCTGTGGATCGTCGTCGATCTGATGATCCTGCCCTGGCCGCTTTCGGGGGTGCTGAC
CGGCCTCCGGCTGACGGCGACGGCGGCCTTCGCCGGTCTGGCCTGCGGCTTTCGCAATACCGAACGGGTGGCGACGGCGC
TGGTCGCCCTGGCTTTGCTGCTGAGCATCCCCTGTCTGTTCTTTGCCATCAGCGTGCCCAGTCTGTCGGGAATCGCCCTG
GAGCCGACCCAACAGGTGTTGGCTTCGGGCTATGCCTTCCTGCCCTATGTGATGGTCGCCGGCCTCGCCGTCTTTCCAAT
CACCGCCGTTGAGGGAGTTCTGCTGGCCTTCCCGCTGATCGCCTCGCAGATGACCGTCGCCTTGCTCGGGTTTCCCCTCG
AGCCCTTCAGCTATTACCTGGGCGCCTTGTGGCTGCTGACCCTTTTGGCGGTGGTGGCGACCCTGGCGGGGATGAGCCAA
CTGCATTTCATGACCCAATTGGTCAATCAGGCCTCCCATGACGGCCTGACGAAAAGCTATACCCGCCGGGTTGGCGAGGA
ATTGCTTGATGTGCAGTTCAACGCCGCCCTGCGCGCCGGACTGACCCTGTCGATCGCCTTTTGCGACCTTGATCACTTCA
AATCGGTCAACGACCGCTTCGGCCATGAGGAAGGCGACCGCGCCCTGAAACGCGCCGCCGAGGCTTTCCGCAGCGTGCTG
CGGCGGGGCGATATCATCGTGCGCTGGGGGGGCGAGGAATTCATCATCCTGATGCCCAATACCAGCGCCGAAGGGGCCCT
GCAGGCCATGCTGCGGCTGCGCGAGGTCGGCTTGGGGCTGCTGCCCGACGGCACGGTTCAGACCGCCAGCGTCGGCGTCG
CCGAACTGACCGCCGATCATAGCCGCAACTGGTCCGATCTGGTGGAAACCGCCGATAAGCGCATGTACAAGGCCAAGAAA
ACCGGCCGCGACCGGGTGGTGACCATGGGGGGGGATATCGTCGTCGCCCGCTTCCCGCGCGAAGCCAACGCCGCCTGA

Upstream 100 bases:

>100_bases
GCCAGACTTGATAAGCGATCTTATCTTGCCGATATCCCATTCGCCTTTGGTTCGGCGGAGACGCGCTCTTCTGATCATTT
CGCGGGTGCGGTGGGTGGCG

Downstream 100 bases:

>100_bases
GGCGATGGGGCCTTTCCTCCAGGAATAATATATCTGTAGGGTTGTATACTTTTTTGATGGCTTTGCTAGGATGTCTTCAT
CCTTGGAGGGCAACAATGAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MVFAFLTPLWIVVDLMILPWPLSGVLTGLRLTATAAFAGLACGFRNTERVATALVALALLLSIPCLFFAISVPSLSGIAL
EPTQQVLASGYAFLPYVMVAGLAVFPITAVEGVLLAFPLIASQMTVALLGFPLEPFSYYLGALWLLTLLAVVATLAGMSQ
LHFMTQLVNQASHDGLTKSYTRRVGEELLDVQFNAALRAGLTLSIAFCDLDHFKSVNDRFGHEEGDRALKRAAEAFRSVL
RRGDIIVRWGGEEFIILMPNTSAEGALQAMLRLREVGLGLLPDGTVQTASVGVAELTADHSRNWSDLVETADKRMYKAKK
TGRDRVVTMGGDIVVARFPREANAA

Sequences:

>Translated_345_residues
MVFAFLTPLWIVVDLMILPWPLSGVLTGLRLTATAAFAGLACGFRNTERVATALVALALLLSIPCLFFAISVPSLSGIAL
EPTQQVLASGYAFLPYVMVAGLAVFPITAVEGVLLAFPLIASQMTVALLGFPLEPFSYYLGALWLLTLLAVVATLAGMSQ
LHFMTQLVNQASHDGLTKSYTRRVGEELLDVQFNAALRAGLTLSIAFCDLDHFKSVNDRFGHEEGDRALKRAAEAFRSVL
RRGDIIVRWGGEEFIILMPNTSAEGALQAMLRLREVGLGLLPDGTVQTASVGVAELTADHSRNWSDLVETADKRMYKAKK
TGRDRVVTMGGDIVVARFPREANAA
>Mature_345_residues
MVFAFLTPLWIVVDLMILPWPLSGVLTGLRLTATAAFAGLACGFRNTERVATALVALALLLSIPCLFFAISVPSLSGIAL
EPTQQVLASGYAFLPYVMVAGLAVFPITAVEGVLLAFPLIASQMTVALLGFPLEPFSYYLGALWLLTLLAVVATLAGMSQ
LHFMTQLVNQASHDGLTKSYTRRVGEELLDVQFNAALRAGLTLSIAFCDLDHFKSVNDRFGHEEGDRALKRAAEAFRSVL
RRGDIIVRWGGEEFIILMPNTSAEGALQAMLRLREVGLGLLPDGTVQTASVGVAELTADHSRNWSDLVETADKRMYKAKK
TGRDRVVTMGGDIVVARFPREANAA

Specific function: Unknown

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=245, Percent_Identity=33.0612244897959, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082007, Length=164, Percent_Identity=39.6341463414634, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87081881, Length=184, Percent_Identity=33.1521739130435, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1787802, Length=243, Percent_Identity=30.8641975308642, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787262, Length=165, Percent_Identity=33.9393939393939, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI145693134, Length=156, Percent_Identity=32.0512820512821, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788381, Length=184, Percent_Identity=31.5217391304348, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787541, Length=159, Percent_Identity=35.8490566037736, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87081974, Length=185, Percent_Identity=26.4864864864865, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787816, Length=162, Percent_Identity=33.9506172839506, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081977, Length=161, Percent_Identity=34.7826086956522, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 37270; Mature: 37270

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFAFLTPLWIVVDLMILPWPLSGVLTGLRLTATAAFAGLACGFRNTERVATALVALALL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSIPCLFFAISVPSLSGIALEPTQQVLASGYAFLPYVMVAGLAVFPITAVEGVLLAFPLI
HHHHHHHHHHCCCCCCCCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQMTVALLGFPLEPFSYYLGALWLLTLLAVVATLAGMSQLHFMTQLVNQASHDGLTKSY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TRRVGEELLDVQFNAALRAGLTLSIAFCDLDHFKSVNDRFGHEEGDRALKRAAEAFRSVL
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRGDIIVRWGGEEFIILMPNTSAEGALQAMLRLREVGLGLLPDGTVQTASVGVAELTADH
HCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHC
SRNWSDLVETADKRMYKAKKTGRDRVVTMGGDIVVARFPREANAA
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MVFAFLTPLWIVVDLMILPWPLSGVLTGLRLTATAAFAGLACGFRNTERVATALVALALL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSIPCLFFAISVPSLSGIALEPTQQVLASGYAFLPYVMVAGLAVFPITAVEGVLLAFPLI
HHHHHHHHHHCCCCCCCCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQMTVALLGFPLEPFSYYLGALWLLTLLAVVATLAGMSQLHFMTQLVNQASHDGLTKSY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TRRVGEELLDVQFNAALRAGLTLSIAFCDLDHFKSVNDRFGHEEGDRALKRAAEAFRSVL
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRGDIIVRWGGEEFIILMPNTSAEGALQAMLRLREVGLGLLPDGTVQTASVGVAELTADH
HCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHC
SRNWSDLVETADKRMYKAKKTGRDRVVTMGGDIVVARFPREANAA
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]