| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is wcaA [C]
Identifier: 83593829
GI number: 83593829
Start: 2900277
End: 2901245
Strand: Reverse
Name: wcaA [C]
Synonym: Rru_A2494
Alternate gene names: 83593829
Gene position: 2901245-2900277 (Counterclockwise)
Preceding gene: 83593830
Following gene: 83593828
Centisome position: 66.65
GC content: 66.36
Gene sequence:
>969_bases GTGACCGCGACTTCCCCCGCCGAGGCTCTCCCTGCGCTGATCACCATCGGCCTGACCTGCTATAACGCCGCCGCCACCAT CGAGCGGGCGCTCGACAGCGCCCTGGCCCAGGACTGGCCCCTGATCGAGGTGGTGGTGGTCGATGACGCCTCAAGCGATG GCAGCGCCGATATCCTGGCGCGGCGGGCGGCCGCCGATGGCCGGATCCGCCTGATCCGCCACGCCGAAAATCAGGGCTGC GCCGCGGCGCGCAATGCCATTCTGAGCGCCGCCAAGGGCGCTTTCATCGCCTTTTTCGACGATGACGATGTCAGCGCTCC CCAGCGTCTGCGCCGCCAGCGGGCGCTCATCCTGGATTACGAGCGGGAAAGCGGCGCGGCTTTGATCGCCTGTCACCTGT CTGGTCAGCGGATCTATGCCAATGGCTATGTCATGACCTTTCAGGCGATCGGCGCGCGCCCGCGCGTTCCCCGGGGCGAG GAGGTCTCGGATTACCTGTTGTCCTTCGACCGCCGGCCCGGGGTGTTTTATGGTGGCGGTACCCCGACCGCCTCGCTGAT GGCGCGGGCCGAGGTTTTCAGCGCGGTTGGCGGCTTCGACAAAGGCTTGCGCCGCCAGGAGGACGTTGACTTCGCCGTGC GGCTTGGCCGTCTGGGCGGGCATTTCATCGGCCCCGCCGAACCCCTGTTAACCCAATATGCCAGCGAGGGGGTGGACAAG GCGGCGCGGGTCGAGCATGACAGCTTCCAGGCCCTGTTGATCAAGCATCGGGATTATCTGGTGGCCAAGGGGCGCTTCCA TTACATGATGGGGTGGTCGCGGGTGCGCTTTCGTCATTTCAATGGGCAGGACGGCCGGGCGGCCCTGGCGTTGATCGGGC TGTTTGCCCGCTATCCCCTGCGCACGGCCCGCCATTTCGTCCTTTCCGCCAGCCGGCGGTTTCAACACGAGCGTTCGATC AGAGCCTGA
Upstream 100 bases:
>100_bases GCCTGAGCCATCCGCTGAAACTCGCGCGCAAGATCGTTTGGTCGCTGCCCGCCGCCGGCACCCGGGCGGCCTATCACCGC CAGCACCGCAAGGACACGTC
Downstream 100 bases:
>100_bases CAGCATGCCTTCCCTTCCCCCTTCCGCTCCCTCCGTCTTGTTCGCTTGCCGGAATTTCGACCGTATGGCCGGTGGCATCG AGCGTATGGCGACAATGATG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTATSPAEALPALITIGLTCYNAAATIERALDSALAQDWPLIEVVVVDDASSDGSADILARRAAADGRIRLIRHAENQGC AAARNAILSAAKGAFIAFFDDDDVSAPQRLRRQRALILDYERESGAALIACHLSGQRIYANGYVMTFQAIGARPRVPRGE EVSDYLLSFDRRPGVFYGGGTPTASLMARAEVFSAVGGFDKGLRRQEDVDFAVRLGRLGGHFIGPAEPLLTQYASEGVDK AARVEHDSFQALLIKHRDYLVAKGRFHYMMGWSRVRFRHFNGQDGRAALALIGLFARYPLRTARHFVLSASRRFQHERSI RA
Sequences:
>Translated_322_residues MTATSPAEALPALITIGLTCYNAAATIERALDSALAQDWPLIEVVVVDDASSDGSADILARRAAADGRIRLIRHAENQGC AAARNAILSAAKGAFIAFFDDDDVSAPQRLRRQRALILDYERESGAALIACHLSGQRIYANGYVMTFQAIGARPRVPRGE EVSDYLLSFDRRPGVFYGGGTPTASLMARAEVFSAVGGFDKGLRRQEDVDFAVRLGRLGGHFIGPAEPLLTQYASEGVDK AARVEHDSFQALLIKHRDYLVAKGRFHYMMGWSRVRFRHFNGQDGRAALALIGLFARYPLRTARHFVLSASRRFQHERSI RA >Mature_321_residues TATSPAEALPALITIGLTCYNAAATIERALDSALAQDWPLIEVVVVDDASSDGSADILARRAAADGRIRLIRHAENQGCA AARNAILSAAKGAFIAFFDDDDVSAPQRLRRQRALILDYERESGAALIACHLSGQRIYANGYVMTFQAIGARPRVPRGEE VSDYLLSFDRRPGVFYGGGTPTASLMARAEVFSAVGGFDKGLRRQEDVDFAVRLGRLGGHFIGPAEPLLTQYASEGVDKA ARVEHDSFQALLIKHRDYLVAKGRFHYMMGWSRVRFRHFNGQDGRAALALIGLFARYPLRTARHFVLSASRRFQHERSIR A
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787259, Length=155, Percent_Identity=28.3870967741935, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 35351; Mature: 35219
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATSPAEALPALITIGLTCYNAAATIERALDSALAQDWPLIEVVVVDDASSDGSADILA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHH RRAAADGRIRLIRHAENQGCAAARNAILSAAKGAFIAFFDDDDVSAPQRLRRQRALILDY HHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCEEEEE ERESGAALIACHLSGQRIYANGYVMTFQAIGARPRVPRGEEVSDYLLSFDRRPGVFYGGG ECCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEECCC TPTASLMARAEVFSAVGGFDKGLRRQEDVDFAVRLGRLGGHFIGPAEPLLTQYASEGVDK CCHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH AARVEHDSFQALLIKHRDYLVAKGRFHYMMGWSRVRFRHFNGQDGRAALALIGLFARYPL HHHCCCCHHHHHHEECCCEEEECCCEEEEECHHEEEEEECCCCCCHHHHHHHHHHHHCCH RTARHFVLSASRRFQHERSIRA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TATSPAEALPALITIGLTCYNAAATIERALDSALAQDWPLIEVVVVDDASSDGSADILA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHH RRAAADGRIRLIRHAENQGCAAARNAILSAAKGAFIAFFDDDDVSAPQRLRRQRALILDY HHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCEEEEE ERESGAALIACHLSGQRIYANGYVMTFQAIGARPRVPRGEEVSDYLLSFDRRPGVFYGGG ECCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEECCC TPTASLMARAEVFSAVGGFDKGLRRQEDVDFAVRLGRLGGHFIGPAEPLLTQYASEGVDK CCHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH AARVEHDSFQALLIKHRDYLVAKGRFHYMMGWSRVRFRHFNGQDGRAALALIGLFARYPL HHHCCCCHHHHHHEECCCEEEECCCEEEEECHHEEEEEECCCCCCHHHHHHHHHHHHCCH RTARHFVLSASRRFQHERSIRA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]