| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593772
Identifier: 83593772
GI number: 83593772
Start: 2835491
End: 2835982
Strand: Reverse
Name: 83593772
Synonym: Rru_A2437
Alternate gene names: NA
Gene position: 2835982-2835491 (Counterclockwise)
Preceding gene: 83593773
Following gene: 161777624
Centisome position: 65.15
GC content: 69.72
Gene sequence:
>492_bases ATGCTCCGTCTGGTTTCCAGCCCCCGCGCCGCCGTTCTTTCGGCAACGGGCGGCCTTTGCCTGATGCTTGCCGCCACCGC CCCGGCCGGGGCCGAGGATATCAACGCCGATACCGCCCGCCTGGGCTGGCTTGACAAGACCACGGCGCGGGTGGGCGAAA GCAGCATCGCCGTGGGCGGCGACCTGCGGCTGGGGTCGCTGACCATCACCGTGCGCTCCTGCGTGCGCCGGGTGCCGCCC GACGATCCCGAAAGCGCCGCTTTCCTTGATATCGTCGAACGCGCCGAAGGGGTGGCGGCCAAGCAGATCTTCGAAGGCTG GATGTTCGCATCCAGCCCGTCGCTCTCGGCGATGGACCACGCGGTTTACGATGTCTGGGTCCTGCGCTGCGAGATCCCGG CCGACCGTGACGCCGGCGATAGCGGCAAGCCCGAAAGCGCCCCCGAAGCCGCCCCCATCCCGGTCGATCCCGGCGGCGCC CCGCTCGATTAA
Upstream 100 bases:
>100_bases CCCGCCTGACCCATACCCAGGATTTCCAGTCGATGGAAGAACTGGTGGGCGAGATCATCTTCCTCGCGACACAGCCCGCT CCCGGGTCTTGAGGCTTACC
Downstream 100 bases:
>100_bases GGCGCCCCCTCGCGGTCCGGCCCCCCGGTCAGTAACCGCTGGGGGTGTCCAGGGCCGCCAGGACGTCGGGGACGTCGACG GTGAAATCGCCCATCACCTG
Product: cellulase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLRLVSSPRAAVLSATGGLCLMLAATAPAGAEDINADTARLGWLDKTTARVGESSIAVGGDLRLGSLTITVRSCVRRVPP DDPESAAFLDIVERAEGVAAKQIFEGWMFASSPSLSAMDHAVYDVWVLRCEIPADRDAGDSGKPESAPEAAPIPVDPGGA PLD
Sequences:
>Translated_163_residues MLRLVSSPRAAVLSATGGLCLMLAATAPAGAEDINADTARLGWLDKTTARVGESSIAVGGDLRLGSLTITVRSCVRRVPP DDPESAAFLDIVERAEGVAAKQIFEGWMFASSPSLSAMDHAVYDVWVLRCEIPADRDAGDSGKPESAPEAAPIPVDPGGA PLD >Mature_163_residues MLRLVSSPRAAVLSATGGLCLMLAATAPAGAEDINADTARLGWLDKTTARVGESSIAVGGDLRLGSLTITVRSCVRRVPP DDPESAAFLDIVERAEGVAAKQIFEGWMFASSPSLSAMDHAVYDVWVLRCEIPADRDAGDSGKPESAPEAAPIPVDPGGA PLD
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16885; Mature: 16885
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLVSSPRAAVLSATGGLCLMLAATAPAGAEDINADTARLGWLDKTTARVGESSIAVGG CCEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCCCEEECC DLRLGSLTITVRSCVRRVPPDDPESAAFLDIVERAEGVAAKQIFEGWMFASSPSLSAMDH CEEECCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH AVYDVWVLRCEIPADRDAGDSGKPESAPEAAPIPVDPGGAPLD HHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRLVSSPRAAVLSATGGLCLMLAATAPAGAEDINADTARLGWLDKTTARVGESSIAVGG CCEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCCCEEECC DLRLGSLTITVRSCVRRVPPDDPESAAFLDIVERAEGVAAKQIFEGWMFASSPSLSAMDH CEEECCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH AVYDVWVLRCEIPADRDAGDSGKPESAPEAAPIPVDPGGAPLD HHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA