| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fecR [C]
Identifier: 83593731
GI number: 83593731
Start: 2787133
End: 2788128
Strand: Reverse
Name: fecR [C]
Synonym: Rru_A2396
Alternate gene names: 83593731
Gene position: 2788128-2787133 (Counterclockwise)
Preceding gene: 83593732
Following gene: 83593730
Centisome position: 64.05
GC content: 73.49
Gene sequence:
>996_bases ATGGCCGTGGGGGCCGCCGGGGATAGTCGAGAGGATGCGGCGCGGGATCGCCTGATCGCCGAGGCGACGGCGCGGTTCCT GCGTTTGCGAACCGATCCCGCCGATGCGGCCGGGCGCGCCGATCTCGCGCGCTGGCTGGCGGCTTCGCCCCGTCATGGCG AGGTGTGGCGCGCGCTGGAGCGCACATGGCGGGCGACGGGACTGCTCGGCCCGCTCGCCGCCCCCCAATCGGCCCCGTCG CCGGTTCGCCGTCCCGCCCGCCCGTCCAAACGGGCGCGCCGGCTGACGGCCTTCGCCTTGGCCGCGTCGCTGGCCCTGGG GATCGGCGCGCTGGTCGGCGGGCCTTTGTGGCCGGGCGCCGATTACCGGGCCGGGGCGGCGGGGATCGCCGCGATCGTCT TGGAGGACGGCTCGCGGGTTCGGCTCGATGCCGGAAGCGCGCTTGATGTCGCCTATGGTCCCGATCGGCGCGAGGTGGCC TTGCGCGACGGTCCGGCCTTCTTCGAGGTCGAGCCCGATACGGCGCGGCCCTTCGTCGTGCGGGCGGGCGCGGTGGAGGT CACGGTCACCGGCACCGCCTTCGCCATCGATGTCTCGGCGAGCGAGGTTGGCGTCAGTGTCGAGCATGGCGGCGTTCGCG TGGTTTCGGCCGGGCGGAGCGCCCTGTTGGCGCCGGGGGAGCGGATGCGCATCGCCAAGGCCGATGGCGCGGTTGTGCGC GACCGCGTGCCGCTTTCGGCCATCGGCCCCTGGCGGCGTGGCCGGTTGCTGGTCGAGGATCGGGCCTTGTCCGAGGTGGT CGAGGCGGTGGAGCGCCATTTCGCCGGGGCGATCATCCTTGGCGATGGGGCAATGGCCGAACGGCGGGTCACCGGCGTCT TCGATCTTGGCGATCCCGAGCGGGCGCTGCGGGCGGCGGTGGAGCCTTTGGGCGGAGAAATCCGCCGGCTCGGCCCCTGG CTTTTGATGGTTTCCGGACCCTCCGATCCGCGCTAA
Upstream 100 bases:
>100_bases TTTGATCGAAAAAAACAATGGGGGAAAGCCCGGGGCCGTTCGTCTAACCAAGGAGGGGATGGAGGATCGTCCCGCATGCG CAAAAAGCAGGGAGACGGCG
Downstream 100 bases:
>100_bases CGCGGCTTTCGGGAAAAAGTTCCTAAAAAAACGAGGATTTTCTGAAGAATGCTTCGGCTGCGTCGTCTCTTTCCCACAAG CGCATGCGAACAAGTCGCAT
Product: putative FecR
Products: NA
Alternate protein names: FecR Protein; Transmembrane Sensor; Sigma Factor Regulatory Protein FecR/PupR Family; FecR Family Protein; Two Component Sensor Histidine Kinase FecR/PupR; Transcriptional Regulator; Two Component Sensor Kinase; Anti-Sigma Factor FecR Family; Ferric Citrate Sensor FecR; Anti-Feci Sigma Factor Fecr; FecR Iron Siderophore Sensor Protein; Iron Siderophore Sensor Protein; Transmembrane Sensor Protein; FecR-Like Transmembrane Sensor; FecR Protein Superfamily Protein; Anti-Sigma Factor FecR-Like Protein; Protein FecR; Inner Membrane Sensor Protein; Fe2+-Dicitrate Sensor Membrane Component; FecR Family; IRON Transport Regulator Transmembrane Protein; Iron Acquisition-Like Protein; Anti-Sigma Factor Protein FecR Family; Iron-Dicitrate Sensor Membrane Component; FecR Iron Sensor Protein; Iron Uptake Transcriptional Regulator Protein; Iron Dicitrate Transmembrane Sensor FecR; Two-Component System Sensor Protein
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAVGAAGDSREDAARDRLIAEATARFLRLRTDPADAAGRADLARWLAASPRHGEVWRALERTWRATGLLGPLAAPQSAPS PVRRPARPSKRARRLTAFALAASLALGIGALVGGPLWPGADYRAGAAGIAAIVLEDGSRVRLDAGSALDVAYGPDRREVA LRDGPAFFEVEPDTARPFVVRAGAVEVTVTGTAFAIDVSASEVGVSVEHGGVRVVSAGRSALLAPGERMRIAKADGAVVR DRVPLSAIGPWRRGRLLVEDRALSEVVEAVERHFAGAIILGDGAMAERRVTGVFDLGDPERALRAAVEPLGGEIRRLGPW LLMVSGPSDPR
Sequences:
>Translated_331_residues MAVGAAGDSREDAARDRLIAEATARFLRLRTDPADAAGRADLARWLAASPRHGEVWRALERTWRATGLLGPLAAPQSAPS PVRRPARPSKRARRLTAFALAASLALGIGALVGGPLWPGADYRAGAAGIAAIVLEDGSRVRLDAGSALDVAYGPDRREVA LRDGPAFFEVEPDTARPFVVRAGAVEVTVTGTAFAIDVSASEVGVSVEHGGVRVVSAGRSALLAPGERMRIAKADGAVVR DRVPLSAIGPWRRGRLLVEDRALSEVVEAVERHFAGAIILGDGAMAERRVTGVFDLGDPERALRAAVEPLGGEIRRLGPW LLMVSGPSDPR >Mature_330_residues AVGAAGDSREDAARDRLIAEATARFLRLRTDPADAAGRADLARWLAASPRHGEVWRALERTWRATGLLGPLAAPQSAPSP VRRPARPSKRARRLTAFALAASLALGIGALVGGPLWPGADYRAGAAGIAAIVLEDGSRVRLDAGSALDVAYGPDRREVAL RDGPAFFEVEPDTARPFVVRAGAVEVTVTGTAFAIDVSASEVGVSVEHGGVRVVSAGRSALLAPGERMRIAKADGAVVRD RVPLSAIGPWRRGRLLVEDRALSEVVEAVERHFAGAIILGDGAMAERRVTGVFDLGDPERALRAAVEPLGGEIRRLGPWL LMVSGPSDPR
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=211, Percent_Identity=26.0663507109005, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34774; Mature: 34643
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGAAGDSREDAARDRLIAEATARFLRLRTDPADAAGRADLARWLAASPRHGEVWRALE CCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHH RTWRATGLLGPLAAPQSAPSPVRRPARPSKRARRLTAFALAASLALGIGALVGGPLWPGA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYRAGAAGIAAIVLEDGSRVRLDAGSALDVAYGPDRREVALRDGPAFFEVEPDTARPFVV CCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCEEE RAGAVEVTVTGTAFAIDVSASEVGVSVEHGGVRVVSAGRSALLAPGERMRIAKADGAVVR ECCEEEEEEECEEEEEEECHHHHCEEEECCCEEEEECCCCEEECCCCCEEEEECCCCEEE DRVPLSAIGPWRRGRLLVEDRALSEVVEAVERHFAGAIILGDGAMAERRVTGVFDLGDPE CCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCHH RALRAAVEPLGGEIRRLGPWLLMVSGPSDPR HHHHHHHHHCCCHHEECCCEEEEEECCCCCC >Mature Secondary Structure AVGAAGDSREDAARDRLIAEATARFLRLRTDPADAAGRADLARWLAASPRHGEVWRALE CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHH RTWRATGLLGPLAAPQSAPSPVRRPARPSKRARRLTAFALAASLALGIGALVGGPLWPGA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYRAGAAGIAAIVLEDGSRVRLDAGSALDVAYGPDRREVALRDGPAFFEVEPDTARPFVV CCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCEEE RAGAVEVTVTGTAFAIDVSASEVGVSVEHGGVRVVSAGRSALLAPGERMRIAKADGAVVR ECCEEEEEEECEEEEEEECHHHHCEEEECCCEEEEECCCCEEECCCCCEEEEECCCCEEE DRVPLSAIGPWRRGRLLVEDRALSEVVEAVERHFAGAIILGDGAMAERRVTGVFDLGDPE CCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCHH RALRAAVEPLGGEIRRLGPWLLMVSGPSDPR HHHHHHHHHCCCHHEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA