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The map label for this gene is osmF [H]

Identifier: 83593720

GI number: 83593720

Start: 2776995

End: 2777909

Strand: Reverse

Name: osmF [H]

Synonym: Rru_A2385

Alternate gene names: 83593720

Gene position: 2777909-2776995 (Counterclockwise)

Preceding gene: 83593721

Following gene: 83593719

Centisome position: 63.82

GC content: 64.37

Gene sequence:

>915_bases
ATGAAATCCGCTCTCGCTCGCCTTGCCTGTGCGCTTGTCCTGGGATTGACCACGGCCGCTGCCGCCCGGGCCGATGTGGT
GGTGTCTTCAAAGATCGACACGGAAGGCGGGGTGCTGGGCAATATCATGCTGCTGGCCCTTGAGGCCCACGGCATCAAGA
CCGAGGATCGCTTGCAGCTTGGCGGAACGCCGGTGGTGCGCAAGGCGATCACCGCCGGGGAAATCGACCTGTATCCCGAA
TATACCGGCAATGCCGCCTTCTTCTTCAATAAGGCCGATGATCCGCTGTGGAAGGACGCGGCCCAGGGCTTCGCCACCGC
CAAGGCCTTGGATTACGAGGCCAATCACATCGTTTGGCTGACCCCGGCCCCGGCCAATAACACCTGGGCGGTGGCCTTGC
GCCGCGATCTGGCCGAGGCCGAGACAATCACCAGCTTTTCGGACTTCGGAAAATGGGTGGCCGGTGGCGGTCGGGTGAAA
TTGGCGGCCTCGGCGGAATTCGTCAATTCCGCAGCCGCCCTGCCGGCCTTTCAAAAGGCCTATGGCTTCACCCTTACCCC
CGAGCAGTTGATCGTGCTGTCGGGTGGCGATACGGCCGCGACCATCAAGGCGGCGGCGGACCAGACCAATGGCACCAATG
CGGCGATGGTCTATGGCACCGATGGCGGCATCGCCGCGTCCGATCTGGTGGCCTTGAGCGATGACAAGGCGGTGCAGCCG
GTCTATGCCCCGGCGCCGATCGTCCGCGAGGAAACCCTGAAGCGCCATCCCGAGATCGAGCCGATCCTGGCGCCGATCTT
CGCCGCCCTTGATCTGGAAACCCTCCAAGCCCTCAACGCCCGGGTTCAGGTGGGCGGCGAGCCGGCCCGGGCGGTGGCCA
AGGACTTTCTGACCAGCCACGGGTTGCTTCCCTAG

Upstream 100 bases:

>100_bases
GGATGGAAACCGGCGGGGCCGAGGCATCCAATGGTGGAGATCGGCGTTTCCCCGGCGCCTCGTCCCGCCGCCCCCCCCGT
TCGGATGAAAAGGGTCCTTG

Downstream 100 bases:

>100_bases
ATCAGGATGATTTCAGGTCTGATCGACCTGAAATCTGAATCCTGATCTCAATCTAAATGTTAGAGCGGGATCTTAGGCGA
AAACCGCGCACACTTTTCGC

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKSALARLACALVLGLTTAAAARADVVVSSKIDTEGGVLGNIMLLALEAHGIKTEDRLQLGGTPVVRKAITAGEIDLYPE
YTGNAAFFFNKADDPLWKDAAQGFATAKALDYEANHIVWLTPAPANNTWAVALRRDLAEAETITSFSDFGKWVAGGGRVK
LAASAEFVNSAAALPAFQKAYGFTLTPEQLIVLSGGDTAATIKAAADQTNGTNAAMVYGTDGGIAASDLVALSDDKAVQP
VYAPAPIVREETLKRHPEIEPILAPIFAALDLETLQALNARVQVGGEPARAVAKDFLTSHGLLP

Sequences:

>Translated_304_residues
MKSALARLACALVLGLTTAAAARADVVVSSKIDTEGGVLGNIMLLALEAHGIKTEDRLQLGGTPVVRKAITAGEIDLYPE
YTGNAAFFFNKADDPLWKDAAQGFATAKALDYEANHIVWLTPAPANNTWAVALRRDLAEAETITSFSDFGKWVAGGGRVK
LAASAEFVNSAAALPAFQKAYGFTLTPEQLIVLSGGDTAATIKAAADQTNGTNAAMVYGTDGGIAASDLVALSDDKAVQP
VYAPAPIVREETLKRHPEIEPILAPIFAALDLETLQALNARVQVGGEPARAVAKDFLTSHGLLP
>Mature_304_residues
MKSALARLACALVLGLTTAAAARADVVVSSKIDTEGGVLGNIMLLALEAHGIKTEDRLQLGGTPVVRKAITAGEIDLYPE
YTGNAAFFFNKADDPLWKDAAQGFATAKALDYEANHIVWLTPAPANNTWAVALRRDLAEAETITSFSDFGKWVAGGGRVK
LAASAEFVNSAAALPAFQKAYGFTLTPEQLIVLSGGDTAATIKAAADQTNGTNAAMVYGTDGGIAASDLVALSDDKAVQP
VYAPAPIVREETLKRHPEIEPILAPIFAALDLETLQALNARVQVGGEPARAVAKDFLTSHGLLP

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=280, Percent_Identity=57.8571428571429, Blast_Score=337, Evalue=5e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 31753; Mature: 31753

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSALARLACALVLGLTTAAAARADVVVSSKIDTEGGVLGNIMLLALEAHGIKTEDRLQL
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHEEEEEEEECCCCCCCCCEEE
GGTPVVRKAITAGEIDLYPEYTGNAAFFFNKADDPLWKDAAQGFATAKALDYEANHIVWL
CCCHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
TPAPANNTWAVALRRDLAEAETITSFSDFGKWVAGGGRVKLAASAEFVNSAAALPAFQKA
ECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCHHHHHH
YGFTLTPEQLIVLSGGDTAATIKAAADQTNGTNAAMVYGTDGGIAASDLVALSDDKAVQP
CCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHEEEECCCCCCCC
VYAPAPIVREETLKRHPEIEPILAPIFAALDLETLQALNARVQVGGEPARAVAKDFLTSH
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHC
GLLP
CCCC
>Mature Secondary Structure
MKSALARLACALVLGLTTAAAARADVVVSSKIDTEGGVLGNIMLLALEAHGIKTEDRLQL
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHEEEEEEEECCCCCCCCCEEE
GGTPVVRKAITAGEIDLYPEYTGNAAFFFNKADDPLWKDAAQGFATAKALDYEANHIVWL
CCCHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
TPAPANNTWAVALRRDLAEAETITSFSDFGKWVAGGGRVKLAASAEFVNSAAALPAFQKA
ECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCHHHHHH
YGFTLTPEQLIVLSGGDTAATIKAAADQTNGTNAAMVYGTDGGIAASDLVALSDDKAVQP
CCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHEEEECCCCCCCC
VYAPAPIVREETLKRHPEIEPILAPIFAALDLETLQALNARVQVGGEPARAVAKDFLTSH
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHC
GLLP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]