Click here to switch to the map view.

The map label for this gene is yehY [H]

Identifier: 83593719

GI number: 83593719

Start: 2775694

End: 2776872

Strand: Reverse

Name: yehY [H]

Synonym: Rru_A2384

Alternate gene names: 83593719

Gene position: 2776872-2775694 (Counterclockwise)

Preceding gene: 83593720

Following gene: 83593718

Centisome position: 63.79

GC content: 71.67

Gene sequence:

>1179_bases
ATGGGGATATCCCTTGATCGGCCGGGGATCATCGTCGCCCTGGTGCTGGGGGCCGCCTTGGCCGGCCCGCCGTTCATGAC
CCTGCGGGCGAACCGGATCGCCAGCGGCAAAGGGGTGGCGTTGTTCGACGCGCTGCCCTGGGGCGCGGCGGCCGGCATTG
TCGCCCTCGCCGTGATCGTCGGCGGCGTCGCCTTGCTGGCGCGGCGGCCGCTGGCCCGCCTGGGCGCTGCGGTGATCGGC
GGAGGGGTGGGAATGCTGGCCGTCGGCTGGGCGGCCGAAGGCCTGACCCAGGCGGGCAATCCCTATGCCCGCATCGCCCC
GGCCGGCGGCTTCTGGCTGCTGGTGCTGGCCTGTTTGCTGCTGGGGACCGATGCCCTGGTCCGCCTGAGGCCGGGACCGC
TGGCCCGGCTGCTGGCCCTTGGCGCCCTGTTTGGCGCTTTGGGCCTGCTGCTGGCCTCGGGGCAGTGGGACGGGGTGTCG
GTTCTTAAGGAATACGCCAATCGCGCCGATGCCTTCTGGCGCGAGGCTCGCACCCATCTCGCCCTCGCCCTCGGGGCGGT
GGCGGTCGCCTGCGCTGTTGGCCTGCCCTTGGGGGTGCTGTGCCACCGGGTGGCTTGGCTGCGCGGCATGGTCTTGCAGG
GGCTGACGATCATTCAGACCATTCCCAGCATCGCGTTGTTTGGGATTTTGATGGCGCCGCTCGGCTGGTTGGCCGCCCAT
GTGCCGGCGATCGCCGCCCTGGGCGTGCGCGGCATCGGCGCCACGCCGGCTTTGGTCGCCCTGATCTTGTACGCCTTGCT
GCCGGTGGTCGCCAATACGGTGGTCGGTCTGGCCCAGGTGCCCGCCGCCACCGTGGACGCGGCGCGCGGCATGGGCATGG
GGCGCGGTCGCCTCCTGCGCGAGGTGGAACTGCCGCTCGCCCTGCCGGTGATCCTAACCGGGGTGCGCATCGTGCTTGTT
CAGGCGATCGGTTTGACCACCGTGGCCGCCCTGATCGGCGGCGGCGGCTTTGGCACCTTCGTTTTTCAAGGCGTTGGTCA
GGCGGCGATGGATCTGGTGCTGCTGGGCGCCCTGCCTACTGTCGCCCTGGCCTTCGGCGCCGCCGTGATCCTTGACGCCT
TGATCGAGGGGGCGCGGCGCGGCGGCGGCGCCCCCACCCCTGGCGTCGGGAGACGGTGA

Upstream 100 bases:

>100_bases
TCGACCTGAAATCTGAATCCTGATCTCAATCTAAATGTTAGAGCGGGATCTTAGGCGAAAACCGCGCACACTTTTCGCCA
TCCCGCTCTAGGGGTCCTTG

Downstream 100 bases:

>100_bases
TGCCCCAGCCGATGATCGTGCTTGACCATCTGACCAAACGCTTCGCCGAGACCACCGTGGTCGATGACGTGTCGCTGGGC
ATCGACGAGGGAACGGTGCT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MGISLDRPGIIVALVLGAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAVIVGGVALLARRPLARLGAAVIG
GGVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLACLLLGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVS
VLKEYANRADAFWREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAH
VPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLREVELPLALPVILTGVRIVLV
QAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPTVALAFGAAVILDALIEGARRGGGAPTPGVGRR

Sequences:

>Translated_392_residues
MGISLDRPGIIVALVLGAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAVIVGGVALLARRPLARLGAAVIG
GGVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLACLLLGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVS
VLKEYANRADAFWREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAH
VPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLREVELPLALPVILTGVRIVLV
QAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPTVALAFGAAVILDALIEGARRGGGAPTPGVGRR
>Mature_391_residues
GISLDRPGIIVALVLGAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAVIVGGVALLARRPLARLGAAVIGG
GVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLACLLLGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVSV
LKEYANRADAFWREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAHV
PAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLREVELPLALPVILTGVRIVLVQ
AIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPTVALAFGAAVILDALIEGARRGGGAPTPGVGRR

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=358, Percent_Identity=41.0614525139665, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1788449, Length=156, Percent_Identity=42.9487179487179, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1789033, Length=210, Percent_Identity=32.3809523809524, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39258; Mature: 39127

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISLDRPGIIVALVLGAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAVIV
CCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
GGVALLARRPLARLGAAVIGGGVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLACLL
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
LGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVSVLKEYANRADAFWREARTHL
HCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAH
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
EVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VALAFGAAVILDALIEGARRGGGAPTPGVGRR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GISLDRPGIIVALVLGAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAVIV
CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
GGVALLARRPLARLGAAVIGGGVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLACLL
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
LGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVSVLKEYANRADAFWREARTHL
HCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAH
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
EVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VALAFGAAVILDALIEGARRGGGAPTPGVGRR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]