| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593633
Identifier: 83593633
GI number: 83593633
Start: 2659133
End: 2660233
Strand: Reverse
Name: 83593633
Synonym: Rru_A2298
Alternate gene names: NA
Gene position: 2660233-2659133 (Counterclockwise)
Preceding gene: 83593634
Following gene: 83593632
Centisome position: 61.12
GC content: 64.58
Gene sequence:
>1101_bases ATGTCCGTAACCGCCCTTACGCTGCGTTCTTGCTTTTTCGGGGAAAAGGAGCGCCCGGTCGTCTCCTTCGCCGGAATGAC CGCCAGCCTGTTCCGCTATGACAGCGGCATCGAGGCGATCCGCCTGACCAATGCGCGCGGTCATCTGGTCGTGCTGCCGT TCTTTGGCCAGATGATCTGGGATGCCGTGTTCGACGGCGTCGATCTGACCATGACCAATATGTTCGCCCAACCGCGCCCA GCCGGGGAAATCGTTGGCACCTATGGCTGCTTCGCCTTCCATTCCGGGCTGTTGCGCAACGGCTGTCCCTCGCCCGACGA TACCCATCCCCTGCACGGCGAAATGCCCTGCGCGCCGATGGACGAGGCCGGGTTGGAAACCGGCGTCGATGAAAGCGGTC CCTATCTGGCGGTGACCGGCATGCGCGAATACGTCATGGGCTTTGGCGCCCATTACCGGGCCCGCCCCCGGGTGGTGCTG CGCCCTACGGAGACGCTGTTCACCATCGCCATGACGGTGGACAATCTGGCGGGCGATCCCATGGACCTGATGTACATGTG CCATGTGAACTTCGCTTTCCAGGAAGGGGCCCGCATCGTTCAGCCCGCCCCCTTCACGCCCGAACGCACGGTGGTGCGCA CCGCCATCCCCGGCCATGTGGTGCCGACCGAGGATTACCGCGCCCTGCTCGCCGCCCTGGCCGTCGATCCTTCGGGGATG GAGGTGCTGGACGAGCCGGCGCGCTATGCCCCTGAACAGGTGTTTTATATCCGCGACCCCTTGAGCGACGCCCAGGGCCG CACCGCCCAGATGATGCGCTTGCCCCAAGGCGGCGCCTTCCATATCGCCTATGACGGGGCGCTGTTTCCCAAATGCGTGC GCTGGGTGCTGGTCAACGACGATCAGAAGGTTTGCGCCTTCGCCCTGCCGTCGACCTGCGAACCCGAGGGCTATCTGGCC GAAAAGGCCAAGGGCAATGTCCGCAGCTTGGCGCCGGGCCAAAGGGCGGCCTTCGCCGTGACTTTGGGCTATCTCGATGA ACCGGCGGCCGAGGCCGCCGAACGGGCGATCAAGGCCCTGTCTTTTGGTAAGGGAGCTTAG
Upstream 100 bases:
>100_bases TCGATTTCATCTGGGGCGCCTTCCTGCTTCTGGTGATCGCCATCAATGCGTTGCGCAACCGCTCCCGCTGATCGGTTTTT CGGGAAAAAGGCCTTCCGTC
Downstream 100 bases:
>100_bases AGGATGTCGGGCAGGATCGCCGTTGTCGGCAGCAATATGGTTGACCTGATTACCTATGTCACCCGCATGCCCGACAAGGG CGAGACCATCGAGGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Monosaccharide-Transporting ATPase; Deoxyribocific Mutarotase; Conserved Protein
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSVTALTLRSCFFGEKERPVVSFAGMTASLFRYDSGIEAIRLTNARGHLVVLPFFGQMIWDAVFDGVDLTMTNMFAQPRP AGEIVGTYGCFAFHSGLLRNGCPSPDDTHPLHGEMPCAPMDEAGLETGVDESGPYLAVTGMREYVMGFGAHYRARPRVVL RPTETLFTIAMTVDNLAGDPMDLMYMCHVNFAFQEGARIVQPAPFTPERTVVRTAIPGHVVPTEDYRALLAALAVDPSGM EVLDEPARYAPEQVFYIRDPLSDAQGRTAQMMRLPQGGAFHIAYDGALFPKCVRWVLVNDDQKVCAFALPSTCEPEGYLA EKAKGNVRSLAPGQRAAFAVTLGYLDEPAAEAAERAIKALSFGKGA
Sequences:
>Translated_366_residues MSVTALTLRSCFFGEKERPVVSFAGMTASLFRYDSGIEAIRLTNARGHLVVLPFFGQMIWDAVFDGVDLTMTNMFAQPRP AGEIVGTYGCFAFHSGLLRNGCPSPDDTHPLHGEMPCAPMDEAGLETGVDESGPYLAVTGMREYVMGFGAHYRARPRVVL RPTETLFTIAMTVDNLAGDPMDLMYMCHVNFAFQEGARIVQPAPFTPERTVVRTAIPGHVVPTEDYRALLAALAVDPSGM EVLDEPARYAPEQVFYIRDPLSDAQGRTAQMMRLPQGGAFHIAYDGALFPKCVRWVLVNDDQKVCAFALPSTCEPEGYLA EKAKGNVRSLAPGQRAAFAVTLGYLDEPAAEAAERAIKALSFGKGA >Mature_365_residues SVTALTLRSCFFGEKERPVVSFAGMTASLFRYDSGIEAIRLTNARGHLVVLPFFGQMIWDAVFDGVDLTMTNMFAQPRPA GEIVGTYGCFAFHSGLLRNGCPSPDDTHPLHGEMPCAPMDEAGLETGVDESGPYLAVTGMREYVMGFGAHYRARPRVVLR PTETLFTIAMTVDNLAGDPMDLMYMCHVNFAFQEGARIVQPAPFTPERTVVRTAIPGHVVPTEDYRALLAALAVDPSGME VLDEPARYAPEQVFYIRDPLSDAQGRTAQMMRLPQGGAFHIAYDGALFPKCVRWVLVNDDQKVCAFALPSTCEPEGYLAE KAKGNVRSLAPGQRAAFAVTLGYLDEPAAEAAERAIKALSFGKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39800; Mature: 39669
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTALTLRSCFFGEKERPVVSFAGMTASLFRYDSGIEAIRLTNARGHLVVLPFFGQMIW CCCHHHHHHHHHCCCCCCCEEEECCCHHEEHHHCCCCCEEEEECCCCCEEEEHHHHHHHH DAVFDGVDLTMTNMFAQPRPAGEIVGTYGCFAFHSGLLRNGCPSPDDTHPLHGEMPCAPM HHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DEAGLETGVDESGPYLAVTGMREYVMGFGAHYRARPRVVLRPTETLFTIAMTVDNLAGDP CHHCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEEEEECCHHEEEEEEEHHHCCCCC MDLMYMCHVNFAFQEGARIVQPAPFTPERTVVRTAIPGHVVPTEDYRALLAALAVDPSGM HHEEEEEEECEEHHCCCCEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCH EVLDEPARYAPEQVFYIRDPLSDAQGRTAQMMRLPQGGAFHIAYDGALFPKCVRWVLVND HHHHCHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHEEEEEECC DQKVCAFALPSTCEPEGYLAEKAKGNVRSLAPGQRAAFAVTLGYLDEPAAEAAERAIKAL CCCEEEEECCCCCCCCCCCHHHCCCCCHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH SFGKGA HCCCCC >Mature Secondary Structure SVTALTLRSCFFGEKERPVVSFAGMTASLFRYDSGIEAIRLTNARGHLVVLPFFGQMIW CCHHHHHHHHHCCCCCCCEEEECCCHHEEHHHCCCCCEEEEECCCCCEEEEHHHHHHHH DAVFDGVDLTMTNMFAQPRPAGEIVGTYGCFAFHSGLLRNGCPSPDDTHPLHGEMPCAPM HHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DEAGLETGVDESGPYLAVTGMREYVMGFGAHYRARPRVVLRPTETLFTIAMTVDNLAGDP CHHCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEEEEECCHHEEEEEEEHHHCCCCC MDLMYMCHVNFAFQEGARIVQPAPFTPERTVVRTAIPGHVVPTEDYRALLAALAVDPSGM HHEEEEEEECEEHHCCCCEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCH EVLDEPARYAPEQVFYIRDPLSDAQGRTAQMMRLPQGGAFHIAYDGALFPKCVRWVLVND HHHHCHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHEEEEEECC DQKVCAFALPSTCEPEGYLAEKAKGNVRSLAPGQRAAFAVTLGYLDEPAAEAAERAIKAL CCCEEEEECCCCCCCCCCCHHHCCCCCHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH SFGKGA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA