| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593628
Identifier: 83593628
GI number: 83593628
Start: 2652771
End: 2653424
Strand: Reverse
Name: 83593628
Synonym: Rru_A2293
Alternate gene names: NA
Gene position: 2653424-2652771 (Counterclockwise)
Preceding gene: 83593632
Following gene: 83593627
Centisome position: 60.96
GC content: 69.88
Gene sequence:
>654_bases ATGACACCGATTCTTCTTCTTGTCGGCACCCTGCTTTCGGCGGCTTTCGTGGGTCTGGTGGCCGTTCTCGGTCAAACCCT CGACGGCCCCGCCCTGACCGCCGCCGTCGCCCTGGTCGGCCTGCCGCTGGTCGGGCATCGCGTTTGGCGCCAGACCGCGC CCCATCCCGTCACCGCGCCGGTTCCCAATCAGATTCGCAGGATGTCCCGCGCGCCGGGGGCGGAGCGGGCGCGGATCAAT ACGGGCGAGATCATTGAGGCTTTCGAGGCTTTGGATGTGGCCCTGCTGGGGCGTGGCGAGCGGCCTTTCGCCTTCGAGAC CCTGGCCGAAGCCCGCCGCACCGCCCGGCGCCATCTTGACAGCTATGGCGTGATCACCTGCGATGGCCTGCATTTCCTGA CCACGGCGCGCATCGAGGACCGCGAACTGGCGCGGGCTTATATCCGCAATGTCTATGCCCTCGACAACGACGCGCCGGGC CGGCCGGTCATCCATGTCGCCGGGCGGGCGCCCTGCGCCCCCTTGCGGGTGCCTTCGGTGCCGCCGCTGCCCGCGCGCAT GGTCGATACCCGCAAGGCGATGCGCATGGCCAACGCCCTGGAGCGCCTGCGCTCCACCGCGTCCTCGCCCTCGGGAAGCC GCGAGGCGGCATGA
Upstream 100 bases:
>100_bases ATCCGCTCTCGAGTCACCAAGTTAGAGCGGCGATGGCGCGGAAGGGCGGTGCCGGGTTTTCCGCTTGCCGTGCCCCGTCG CAGGCCCGAGGATTACGACG
Downstream 100 bases:
>100_bases CGGTGGACGCTCACGGCAAAGACGACTGGCAAACCGCTCTGCGGGTGATGGCCGCCGCCGGAACCTGGGAGGAAATGCGT GGCGATCTGGAGCGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTPILLLVGTLLSAAFVGLVAVLGQTLDGPALTAAVALVGLPLVGHRVWRQTAPHPVTAPVPNQIRRMSRAPGAERARIN TGEIIEAFEALDVALLGRGERPFAFETLAEARRTARRHLDSYGVITCDGLHFLTTARIEDRELARAYIRNVYALDNDAPG RPVIHVAGRAPCAPLRVPSVPPLPARMVDTRKAMRMANALERLRSTASSPSGSREAA
Sequences:
>Translated_217_residues MTPILLLVGTLLSAAFVGLVAVLGQTLDGPALTAAVALVGLPLVGHRVWRQTAPHPVTAPVPNQIRRMSRAPGAERARIN TGEIIEAFEALDVALLGRGERPFAFETLAEARRTARRHLDSYGVITCDGLHFLTTARIEDRELARAYIRNVYALDNDAPG RPVIHVAGRAPCAPLRVPSVPPLPARMVDTRKAMRMANALERLRSTASSPSGSREAA >Mature_216_residues TPILLLVGTLLSAAFVGLVAVLGQTLDGPALTAAVALVGLPLVGHRVWRQTAPHPVTAPVPNQIRRMSRAPGAERARINT GEIIEAFEALDVALLGRGERPFAFETLAEARRTARRHLDSYGVITCDGLHFLTTARIEDRELARAYIRNVYALDNDAPGR PVIHVAGRAPCAPLRVPSVPPLPARMVDTRKAMRMANALERLRSTASSPSGSREAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23314; Mature: 23183
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPILLLVGTLLSAAFVGLVAVLGQTLDGPALTAAVALVGLPLVGHRVWRQTAPHPVTAP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPNQIRRMSRAPGAERARINTGEIIEAFEALDVALLGRGERPFAFETLAEARRTARRHLD CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SYGVITCDGLHFLTTARIEDRELARAYIRNVYALDNDAPGRPVIHVAGRAPCAPLRVPSV CCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC PPLPARMVDTRKAMRMANALERLRSTASSPSGSREAA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TPILLLVGTLLSAAFVGLVAVLGQTLDGPALTAAVALVGLPLVGHRVWRQTAPHPVTAP CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPNQIRRMSRAPGAERARINTGEIIEAFEALDVALLGRGERPFAFETLAEARRTARRHLD CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SYGVITCDGLHFLTTARIEDRELARAYIRNVYALDNDAPGRPVIHVAGRAPCAPLRVPSV CCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC PPLPARMVDTRKAMRMANALERLRSTASSPSGSREAA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA