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The map label for this gene is fixB [H]

Identifier: 83593601

GI number: 83593601

Start: 2626550

End: 2627647

Strand: Reverse

Name: fixB [H]

Synonym: Rru_A2266

Alternate gene names: 83593601

Gene position: 2627647-2626550 (Counterclockwise)

Preceding gene: 83593602

Following gene: 83593600

Centisome position: 60.37

GC content: 64.21

Gene sequence:

>1098_bases
ATGAGCGAAGAGAAGAAGCCCGCCCCGGCGGCGGCCGGCCGTGGCGCCGCCAAAAAAGAGCTGTCCGAGCATTTCAAGAC
CTATAAGGACGTCTGGGTTTTCATCGAGATGGAGCGTGGCAAGGTCCACACCGTGTCGTGGGAACTGCTGGGCGAGGGCC
GCAAGCTGGCCGACAAGCTGGGCGTGCAACTGGCCGCGGTGATCCTGGGCCCGCCCGGCAATGATCTTAAGCAGGCGATC
AGCGACGCCTGGAGCTATGGCGCCGATCTCGCCTATGTGGTGTCCGAGCCGCTGCTCAAGGATTATCGCAACGAGCCCTA
TTCGAAGGCGCTGACCGATCTGGTCAACACCCATAAGCCCGAGATCTTGTTGCTGGGGGCGAGCACGCTCGGCCGCGATC
TGGCCGGCTCGGTGGCGACCACCCTCAAGACCGGTCTGACCGCCGATTGCACCGAACTGGCCATCGACGACGACCGTTGT
CTGGCGGCGACCCGTCCGACCTTCGGCGGCACCTTGCTTTGTACCATCTTCACCCTGAACTTCCGCCCGCAGATGGCGAC
CATCCGCCCGCGCGTGATGGCGATGCCCGAACGCAGGGACGCCAAGCCCGGCCGGGTCATCGAGTTCAAGTTGTCGATGG
TCGAAGACGACATCGTGACCAAGATCCTTGATTTCGTGCCCGATACCTCGACCGAGGAAGCCCATCTGGCCTATGCCGAC
ATCGTTGTCGCCGGCGGTCTGGGCATGGGCAATCCGGGGAACTTCCGCCTGATCACCGATCTCGCGGCGGTTCTCGGCGC
CGAATACGGCGGCTCGCGGCCGACCATTCAAAAGGGCTGGATCTCGGCCGATCGCCAGATCGGCCAGACCGGCAAGACCA
TCCGGCCCAAGCTGTATATCGCCGCGGGCATTTCGGGGGCCATTCAGCATCGGGTGGGCGTCGAGGGGGCGGATATGATC
CTGGCGATCAATACCGACGCCAACGCGCCGATCTTCGAATTCGCCCACTACGGCTTGGTCGGCGACGCGACCCGTATTCT
TCCGGCCCTGACCAAGGCGTTCGAAGCGCGCCTCGCGGTCCGGCGGATGGCGAGCTGA

Upstream 100 bases:

>100_bases
ATCGCCCAGGCCACCCTGGATACCCTGTTTTCCGCCAATCCGAAGCTGGAGACCGACCTCCGTAAGCTGGCCGCGGCGTC
GTAATACGGAGGAGCGAGAG

Downstream 100 bases:

>100_bases
TCGAAAGGATCAACGATCATGGCAGAGCATTTCGATGTAATCATCGTCGGTGCGGGCATGGCGGGCAACGCCGCCTCCTA
CACCCTGGCCAAGGCCGGCC

Product: electron transfer flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSEEKKPAPAAAGRGAAKKELSEHFKTYKDVWVFIEMERGKVHTVSWELLGEGRKLADKLGVQLAAVILGPPGNDLKQAI
SDAWSYGADLAYVVSEPLLKDYRNEPYSKALTDLVNTHKPEILLLGASTLGRDLAGSVATTLKTGLTADCTELAIDDDRC
LAATRPTFGGTLLCTIFTLNFRPQMATIRPRVMAMPERRDAKPGRVIEFKLSMVEDDIVTKILDFVPDTSTEEAHLAYAD
IVVAGGLGMGNPGNFRLITDLAAVLGAEYGGSRPTIQKGWISADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADMI
LAINTDANAPIFEFAHYGLVGDATRILPALTKAFEARLAVRRMAS

Sequences:

>Translated_365_residues
MSEEKKPAPAAAGRGAAKKELSEHFKTYKDVWVFIEMERGKVHTVSWELLGEGRKLADKLGVQLAAVILGPPGNDLKQAI
SDAWSYGADLAYVVSEPLLKDYRNEPYSKALTDLVNTHKPEILLLGASTLGRDLAGSVATTLKTGLTADCTELAIDDDRC
LAATRPTFGGTLLCTIFTLNFRPQMATIRPRVMAMPERRDAKPGRVIEFKLSMVEDDIVTKILDFVPDTSTEEAHLAYAD
IVVAGGLGMGNPGNFRLITDLAAVLGAEYGGSRPTIQKGWISADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADMI
LAINTDANAPIFEFAHYGLVGDATRILPALTKAFEARLAVRRMAS
>Mature_364_residues
SEEKKPAPAAAGRGAAKKELSEHFKTYKDVWVFIEMERGKVHTVSWELLGEGRKLADKLGVQLAAVILGPPGNDLKQAIS
DAWSYGADLAYVVSEPLLKDYRNEPYSKALTDLVNTHKPEILLLGASTLGRDLAGSVATTLKTGLTADCTELAIDDDRCL
AATRPTFGGTLLCTIFTLNFRPQMATIRPRVMAMPERRDAKPGRVIEFKLSMVEDDIVTKILDFVPDTSTEEAHLAYADI
VVAGGLGMGNPGNFRLITDLAAVLGAEYGGSRPTIQKGWISADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADMIL
AINTDANAPIFEFAHYGLVGDATRILPALTKAFEARLAVRRMAS

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=232, Percent_Identity=33.6206896551724, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI4503607, Length=232, Percent_Identity=33.6206896551724, Blast_Score=122, Evalue=6e-28,
Organism=Escherichia coli, GI1787990, Length=328, Percent_Identity=32.3170731707317, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786226, Length=335, Percent_Identity=29.2537313432836, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI87082157, Length=278, Percent_Identity=28.0575539568345, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=304, Percent_Identity=31.9078947368421, Blast_Score=124, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6325261, Length=337, Percent_Identity=30.2670623145401, Blast_Score=113, Evalue=6e-26,
Organism=Drosophila melanogaster, GI17136898, Length=332, Percent_Identity=28.3132530120482, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24652801, Length=332, Percent_Identity=28.3132530120482, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 39379; Mature: 39248

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKKPAPAAAGRGAAKKELSEHFKTYKDVWVFIEMERGKVHTVSWELLGEGRKLADKL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEHHHHCCCHHHHHHH
GVQLAAVILGPPGNDLKQAISDAWSYGADLAYVVSEPLLKDYRNEPYSKALTDLVNTHKP
CCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
EILLLGASTLGRDLAGSVATTLKTGLTADCTELAIDDDRCLAATRPTFGGTLLCTIFTLN
CEEEEECHHHCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEECCCCCCCEEEEEEEEEC
FRPQMATIRPRVMAMPERRDAKPGRVIEFKLSMVEDDIVTKILDFVPDTSTEEAHLAYAD
CCCCHHHCCCHHEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHEEEE
IVVAGGLGMGNPGNFRLITDLAAVLGAEYGGSRPTIQKGWISADRQIGQTGKTIRPKLYI
EEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCCCCCCEEEE
AAGISGAIQHRVGVEGADMILAINTDANAPIFEFAHYGLVGDATRILPALTKAFEARLAV
EECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RRMAS
HHHCC
>Mature Secondary Structure 
SEEKKPAPAAAGRGAAKKELSEHFKTYKDVWVFIEMERGKVHTVSWELLGEGRKLADKL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEHHHHCCCHHHHHHH
GVQLAAVILGPPGNDLKQAISDAWSYGADLAYVVSEPLLKDYRNEPYSKALTDLVNTHKP
CCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
EILLLGASTLGRDLAGSVATTLKTGLTADCTELAIDDDRCLAATRPTFGGTLLCTIFTLN
CEEEEECHHHCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEECCCCCCCEEEEEEEEEC
FRPQMATIRPRVMAMPERRDAKPGRVIEFKLSMVEDDIVTKILDFVPDTSTEEAHLAYAD
CCCCHHHCCCHHEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHEEEE
IVVAGGLGMGNPGNFRLITDLAAVLGAEYGGSRPTIQKGWISADRQIGQTGKTIRPKLYI
EEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCCCCCCEEEE
AAGISGAIQHRVGVEGADMILAINTDANAPIFEFAHYGLVGDATRILPALTKAFEARLAV
EECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RRMAS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]