Click here to switch to the map view.

The map label for this gene is fixX [H]

Identifier: 83593599

GI number: 83593599

Start: 2624949

End: 2625239

Strand: Reverse

Name: fixX [H]

Synonym: Rru_A2264

Alternate gene names: 83593599

Gene position: 2625239-2624949 (Counterclockwise)

Preceding gene: 83593600

Following gene: 83593598

Centisome position: 60.31

GC content: 57.39

Gene sequence:

>291_bases
ATGGCGATGAGCGACAAAATCGAAGAAAAGCTGTATCAGAACCGCTATCGGGTTGACGAGGGCTGTCCCCACGTCCGTAT
CGATGCGTCCAAGGTCCCCTCCGAGCAGTTGAAGGCGATGGTCGACATCTGCCCCGCCGGCTGCTACGTGGAAGGGGAGA
ACGGCAAGGTCGAAGTTGTTCCCGATGGTTGCATGGAGTGCGGGACCTGTCGCATTGTGTGTCAGGAAACCGGTGAACTG
GAATGGGCCTATCCGCGTGGCGGCTATGGCATTCTGTTCAAGTTTGGCTGA

Upstream 100 bases:

>100_bases
GTGTCGATAAGCTGACCAAGGAAAAAGACATCGTGCGGAGCTTCCGCAAGGCCCGGGGTGTTCTCGGTCTGGTGGGCGAC
GCCGTCAAGGTGGCGAGGGC

Downstream 100 bases:

>100_bases
GTATTCGCTTTAAGGAATTGGACGGGGGGCTGGCAGGCTTGTCCCCCGTCCGATACGAGGGGATCGGTTCGGGGGAGCCG
GTCCCCTCACAGTCTTCCAG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAMSDKIEEKLYQNRYRVDEGCPHVRIDASKVPSEQLKAMVDICPAGCYVEGENGKVEVVPDGCMECGTCRIVCQETGEL
EWAYPRGGYGILFKFG

Sequences:

>Translated_96_residues
MAMSDKIEEKLYQNRYRVDEGCPHVRIDASKVPSEQLKAMVDICPAGCYVEGENGKVEVVPDGCMECGTCRIVCQETGEL
EWAYPRGGYGILFKFG
>Mature_95_residues
AMSDKIEEKLYQNRYRVDEGCPHVRIDASKVPSEQLKAMVDICPAGCYVEGENGKVEVVPDGCMECGTCRIVCQETGELE
WAYPRGGYGILFKFG

Specific function: Could be a 3Fe-4S cluster-containing protein [H]

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To ferredoxins from P.putida and C.tartarivorum, ferredoxin I from A.vinelandii, ferredoxin II from D.desulfuricans [H]

Homologues:

Organism=Escherichia coli, GI1787992, Length=91, Percent_Identity=38.4615384615385, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI1786228, Length=96, Percent_Identity=37.5, Blast_Score=75, Evalue=7e-16,
Organism=Escherichia coli, GI87082156, Length=84, Percent_Identity=34.5238095238095, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10699; Mature: 10568

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSDKIEEKLYQNRYRVDEGCPHVRIDASKVPSEQLKAMVDICPAGCYVEGENGKVEVV
CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCEEEEC
PDGCMECGTCRIVCQETGELEWAYPRGGYGILFKFG
CCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
AMSDKIEEKLYQNRYRVDEGCPHVRIDASKVPSEQLKAMVDICPAGCYVEGENGKVEVV
CCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCEEEEC
PDGCMECGTCRIVCQETGELEWAYPRGGYGILFKFG
CCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029021; 3031010; 11481432 [H]