| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is glgP [H]
Identifier: 83593579
GI number: 83593579
Start: 2603717
End: 2606197
Strand: Reverse
Name: glgP [H]
Synonym: Rru_A2244
Alternate gene names: 83593579
Gene position: 2606197-2603717 (Counterclockwise)
Preceding gene: 83593580
Following gene: 83593578
Centisome position: 59.87
GC content: 61.59
Gene sequence:
>2481_bases ATGGATACGGTGATCCGCACCGATTTCGAGCTCGACGAGGGGATCGACTTCACCGACGTCGAGCAGATCAAGCACGGGCT TGTCACGTCGATGGTCCGTGGGGTCGGCTTCGATCCGGCTTCGGCGACCGAGCACGATTGGTTTCTCGCCCTGGCCAGCC TGTTGCGCGGCCATCTCAGCGAAAAGGGCATGATGACGTCGCGCGCCCAATACGGCAGCGATACCAAGCGCGTCTATTAT CTGTCGCTGGAGTTTCTGACCGGACGGCGGCTGGTCAAGCATCTGCTCGATCTTGGCATCGAGTCGGCGGTGCGCGCCGC CTTGCGCGAACTGGGCCAGGATCTGGACCGGGTGGCCGAGCAGGAAAGCGACGCGGCCTTGGGCAATGGCGGCCTTGGCC GGCTGGCCGCCTGCTTCCTTGATTCCATGGCCACCCATGGCTATCCCGGCTATGGCTACGGCATCCGCTATGAATTCGGC ATGTTCTCGCAGACCATCGAAAACGGTCAGCAGGTCGAACATCCCGAAAGCTGGCTGCGCAACGGCAATCCCTGGGAAAT CGTTCGCCACAACGTCAGCTATCCGGTGCGCTTTGGCGGCCACATCGTCTGCTTCCGCGACGAAGGCGGCGAGGAGCGCT GCCGCTGGGTCGACGCCAACGAGGTGATCGCCGAGGCCTATGACCTTAAGGAAACCGGCTACGGCGGCGCTTACGGCTGT AATCTGCGCCTGTGGTCGGCCCGCGCCACCCAGGATTTCGACCTGAGCTATTTCAACGAAGGCAACTATATCGAGGCGGT CAAGGACAAGACCACCAGCGAGAACCTGTCCAAGGTGTTGTATCCTATGGACACGACGCTGATGGGGCAGGAACTGCGGC TGAAGCAGGAATATTTCTTCGTTTCCGCCTCGCTGCAAGACATCCTCGCCCGCTTCTTCAAGGTCCATAAGGACCCCAAG CAGATCCCGGCGAAGATCGTCATCCAGCTCAACGACACCCATCCGGCCCTGGCGGTGCCCGAGATGATGCGGCTGTTGAT GGATAATCACGCCTTGTCATGGGATGCCGCCTGGGACATCACCCGCGACACCTTCGCCTATACCAATCACACCTTGCTGC CCGAGGCCCTGGAAACTTGGCCGGTGGCGATGCTCGAAGCGATTTTGCCCCGCCATCTCGAGATCATCTACAAGATCAAC TACGGCTTCCTTCAGCAGGTCCGCCGCGCCTTCCCCGGCGATGTCGCCATGCTGCGCCGCATGTCGCTGATCGACGAGGA TACCCACCGGGTGCGCATGGCCCATCTGGCGGTGGTTGGCAGCCGGCGGGTCAATGGCGTGGCGGCCCTTCACACCAAAC TGCTGCGCGAGCGGGTCTTCCCCGATTTCGATGCCTTCTTCCCCGAGAAATTCGTCAATGTCACCAACGGCATCACCCAG CGCCGCTGGCTTTTGCAGTCAAATCCGCCGCTTGCCGCCCTGGTGAGCGAGACGATCGGCGAAGGCTGGTTGACCGATCT CGACCGCCTGCGCGATCTGGAGAAGTTGGCCGACGATCCGGCCTTCCAGGACCGCTTCCTGACGATCAAGGCCGGCGCGA AGGCCCGGGCGGCGGCTTTGATCGCCGAGCGCTGCGGCGTCGTCGTCTCCACCGCCTCGCTGTTTGATATCCAGATCAAG CGCATTCACGAATACAAGCGCCAGCTGCTCAACATCATGCAGGTGATCGCCCGCTATAACGCCATCCGCCGCGATCCCAA GGCGGTCATGACGCCGCGCACGGTGATCTTCGGCGGCAAGGCGGCGCCCGGGTATTACGTCGCCAAGAAGATCATCCGCC TGATCAACGATGTCGCCGAGACCATCAACCACGATCCGGCGGTGCGCGATCTGTTGAAGGTGGTCTTCGTTCCCAATTAC AACGTCTCGACCGCCGAGATCCTGATCCCGTCTTGCGATCTGTCCGAACAGATCTCGACCGCCGGCACCGAGGCTTCGGG AACGGGCAACATGAAATTCGCCCTCAACGGCGCTTTGACCATCGGCACCCTGGACGGCGCCAATATCGAAATCCGCGAAG AGGTCGGCGACGACAATATCTTCATCTTCGGCCACACCGCCCAGGAGGTTTCGCAGATCAAGGCGCAGGGCTACGATCCG TGGAGCTGGTATGCGGCCGATGACGAGATGCGCACGGTGATCGATATGATCCGCGACGGCTTCTTCTCGACCGAGGAACC CGACCGCTATCGGCCGATCGCCGATGCCCTGCTGGGGTCCGATACCTATCTGGTGCTGGCCGATTTCCGTTCGTATATGG ATGCGCAAAAGGCGGTGGACGGGCTTTACACCAACCAACGCGTCTGGGCGCGTCAGGCCATCCTCAACATCGCCCGGGTT GGCAAGTTCTCGTCCGACCGGGCGATCCATACCTATGCCAAGGATATTTGGGGCGTGCGGCCGATGGACGCCCTCTCCTG A
Upstream 100 bases:
>100_bases TTTCGTGGTCTTATCCCATCGAGCGCGGGGGCTTGCGGTTTATGTGTCGCGTCCCCGTTTCTCCCTGTCTTTACCTCCAC CAACAACGAGGATCCTCATC
Downstream 100 bases:
>100_bases TCCTTTAGGCTAAGACTGTGCGAAAAGGGGCGATCCGGCTTTGGGTCGCCCCTCCTTCATTGTTCGGGTAATCCTTCATG CGGTCTGGTTTCATCGCGAC
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MDTVIRTDFELDEGIDFTDVEQIKHGLVTSMVRGVGFDPASATEHDWFLALASLLRGHLSEKGMMTSRAQYGSDTKRVYY LSLEFLTGRRLVKHLLDLGIESAVRAALRELGQDLDRVAEQESDAALGNGGLGRLAACFLDSMATHGYPGYGYGIRYEFG MFSQTIENGQQVEHPESWLRNGNPWEIVRHNVSYPVRFGGHIVCFRDEGGEERCRWVDANEVIAEAYDLKETGYGGAYGC NLRLWSARATQDFDLSYFNEGNYIEAVKDKTTSENLSKVLYPMDTTLMGQELRLKQEYFFVSASLQDILARFFKVHKDPK QIPAKIVIQLNDTHPALAVPEMMRLLMDNHALSWDAAWDITRDTFAYTNHTLLPEALETWPVAMLEAILPRHLEIIYKIN YGFLQQVRRAFPGDVAMLRRMSLIDEDTHRVRMAHLAVVGSRRVNGVAALHTKLLRERVFPDFDAFFPEKFVNVTNGITQ RRWLLQSNPPLAALVSETIGEGWLTDLDRLRDLEKLADDPAFQDRFLTIKAGAKARAAALIAERCGVVVSTASLFDIQIK RIHEYKRQLLNIMQVIARYNAIRRDPKAVMTPRTVIFGGKAAPGYYVAKKIIRLINDVAETINHDPAVRDLLKVVFVPNY NVSTAEILIPSCDLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIREEVGDDNIFIFGHTAQEVSQIKAQGYDP WSWYAADDEMRTVIDMIRDGFFSTEEPDRYRPIADALLGSDTYLVLADFRSYMDAQKAVDGLYTNQRVWARQAILNIARV GKFSSDRAIHTYAKDIWGVRPMDALS
Sequences:
>Translated_826_residues MDTVIRTDFELDEGIDFTDVEQIKHGLVTSMVRGVGFDPASATEHDWFLALASLLRGHLSEKGMMTSRAQYGSDTKRVYY LSLEFLTGRRLVKHLLDLGIESAVRAALRELGQDLDRVAEQESDAALGNGGLGRLAACFLDSMATHGYPGYGYGIRYEFG MFSQTIENGQQVEHPESWLRNGNPWEIVRHNVSYPVRFGGHIVCFRDEGGEERCRWVDANEVIAEAYDLKETGYGGAYGC NLRLWSARATQDFDLSYFNEGNYIEAVKDKTTSENLSKVLYPMDTTLMGQELRLKQEYFFVSASLQDILARFFKVHKDPK QIPAKIVIQLNDTHPALAVPEMMRLLMDNHALSWDAAWDITRDTFAYTNHTLLPEALETWPVAMLEAILPRHLEIIYKIN YGFLQQVRRAFPGDVAMLRRMSLIDEDTHRVRMAHLAVVGSRRVNGVAALHTKLLRERVFPDFDAFFPEKFVNVTNGITQ RRWLLQSNPPLAALVSETIGEGWLTDLDRLRDLEKLADDPAFQDRFLTIKAGAKARAAALIAERCGVVVSTASLFDIQIK RIHEYKRQLLNIMQVIARYNAIRRDPKAVMTPRTVIFGGKAAPGYYVAKKIIRLINDVAETINHDPAVRDLLKVVFVPNY NVSTAEILIPSCDLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIREEVGDDNIFIFGHTAQEVSQIKAQGYDP WSWYAADDEMRTVIDMIRDGFFSTEEPDRYRPIADALLGSDTYLVLADFRSYMDAQKAVDGLYTNQRVWARQAILNIARV GKFSSDRAIHTYAKDIWGVRPMDALS >Mature_826_residues MDTVIRTDFELDEGIDFTDVEQIKHGLVTSMVRGVGFDPASATEHDWFLALASLLRGHLSEKGMMTSRAQYGSDTKRVYY LSLEFLTGRRLVKHLLDLGIESAVRAALRELGQDLDRVAEQESDAALGNGGLGRLAACFLDSMATHGYPGYGYGIRYEFG MFSQTIENGQQVEHPESWLRNGNPWEIVRHNVSYPVRFGGHIVCFRDEGGEERCRWVDANEVIAEAYDLKETGYGGAYGC NLRLWSARATQDFDLSYFNEGNYIEAVKDKTTSENLSKVLYPMDTTLMGQELRLKQEYFFVSASLQDILARFFKVHKDPK QIPAKIVIQLNDTHPALAVPEMMRLLMDNHALSWDAAWDITRDTFAYTNHTLLPEALETWPVAMLEAILPRHLEIIYKIN YGFLQQVRRAFPGDVAMLRRMSLIDEDTHRVRMAHLAVVGSRRVNGVAALHTKLLRERVFPDFDAFFPEKFVNVTNGITQ RRWLLQSNPPLAALVSETIGEGWLTDLDRLRDLEKLADDPAFQDRFLTIKAGAKARAAALIAERCGVVVSTASLFDIQIK RIHEYKRQLLNIMQVIARYNAIRRDPKAVMTPRTVIFGGKAAPGYYVAKKIIRLINDVAETINHDPAVRDLLKVVFVPNY NVSTAEILIPSCDLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIREEVGDDNIFIFGHTAQEVSQIKAQGYDP WSWYAADDEMRTVIDMIRDGFFSTEEPDRYRPIADALLGSDTYLVLADFRSYMDAQKAVDGLYTNQRVWARQAILNIARV GKFSSDRAIHTYAKDIWGVRPMDALS
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=793, Percent_Identity=52.2068095838588, Blast_Score=806, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=814, Percent_Identity=51.1056511056511, Blast_Score=793, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=795, Percent_Identity=50.8176100628931, Blast_Score=778, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=697, Percent_Identity=51.506456241033, Blast_Score=728, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=667, Percent_Identity=51.8740629685157, Blast_Score=699, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=805, Percent_Identity=53.2919254658385, Blast_Score=853, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=787, Percent_Identity=47.2681067344346, Blast_Score=722, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=813, Percent_Identity=50.4305043050431, Blast_Score=823, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=813, Percent_Identity=50.4305043050431, Blast_Score=823, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=789, Percent_Identity=49.1761723700887, Blast_Score=713, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=812, Percent_Identity=51.6009852216749, Blast_Score=835, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=812, Percent_Identity=51.6009852216749, Blast_Score=835, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93103; Mature: 93103
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTVIRTDFELDEGIDFTDVEQIKHGLVTSMVRGVGFDPASATEHDWFLALASLLRGHLS CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH EKGMMTSRAQYGSDTKRVYYLSLEFLTGRRLVKHLLDLGIESAVRAALRELGQDLDRVAE HCCCHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QESDAALGNGGLGRLAACFLDSMATHGYPGYGYGIRYEFGMFSQTIENGQQVEHPESWLR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHC NGNPWEIVRHNVSYPVRFGGHIVCFRDEGGEERCRWVDANEVIAEAYDLKETGYGGAYGC CCCCHHEEEECCCCCEEECCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEC NLRLWSARATQDFDLSYFNEGNYIEAVKDKTTSENLSKVLYPMDTTLMGQELRLKQEYFF CEEEEECCCCCCCCCEEECCCCEEEHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHE VSASLQDILARFFKVHKDPKQIPAKIVIQLNDTHPALAVPEMMRLLMDNHALSWDAAWDI EHHHHHHHHHHHHHHCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC TRDTFAYTNHTLLPEALETWPVAMLEAILPRHLEIIYKINYGFLQQVRRAFPGDVAMLRR CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCHHHHHHH MSLIDEDTHRVRMAHLAVVGSRRVNGVAALHTKLLRERVFPDFDAFFPEKFVNVTNGITQ HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCHHH RRWLLQSNPPLAALVSETIGEGWLTDLDRLRDLEKLADDPAFQDRFLTIKAGAKARAAAL HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH IAERCGVVVSTASLFDIQIKRIHEYKRQLLNIMQVIARYNAIRRDPKAVMTPRTVIFGGK HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCC AAPGYYVAKKIIRLINDVAETINHDPAVRDLLKVVFVPNYNVSTAEILIPSCDLSEQIST CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHH AGTEASGTGNMKFALNGALTIGTLDGANIEIREEVGDDNIFIFGHTAQEVSQIKAQGYDP CCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHCCCCC WSWYAADDEMRTVIDMIRDGFFSTEEPDRYRPIADALLGSDTYLVLADFRSYMDAQKAVD CEEEECCHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHCCCCEEEHHHHHHHHHHHHHHH GLYTNQRVWARQAILNIARVGKFSSDRAIHTYAKDIWGVRPMDALS HHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure MDTVIRTDFELDEGIDFTDVEQIKHGLVTSMVRGVGFDPASATEHDWFLALASLLRGHLS CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH EKGMMTSRAQYGSDTKRVYYLSLEFLTGRRLVKHLLDLGIESAVRAALRELGQDLDRVAE HCCCHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QESDAALGNGGLGRLAACFLDSMATHGYPGYGYGIRYEFGMFSQTIENGQQVEHPESWLR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHC NGNPWEIVRHNVSYPVRFGGHIVCFRDEGGEERCRWVDANEVIAEAYDLKETGYGGAYGC CCCCHHEEEECCCCCEEECCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEC NLRLWSARATQDFDLSYFNEGNYIEAVKDKTTSENLSKVLYPMDTTLMGQELRLKQEYFF CEEEEECCCCCCCCCEEECCCCEEEHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHE VSASLQDILARFFKVHKDPKQIPAKIVIQLNDTHPALAVPEMMRLLMDNHALSWDAAWDI EHHHHHHHHHHHHHHCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC TRDTFAYTNHTLLPEALETWPVAMLEAILPRHLEIIYKINYGFLQQVRRAFPGDVAMLRR CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCHHHHHHH MSLIDEDTHRVRMAHLAVVGSRRVNGVAALHTKLLRERVFPDFDAFFPEKFVNVTNGITQ HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCHHH RRWLLQSNPPLAALVSETIGEGWLTDLDRLRDLEKLADDPAFQDRFLTIKAGAKARAAAL HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH IAERCGVVVSTASLFDIQIKRIHEYKRQLLNIMQVIARYNAIRRDPKAVMTPRTVIFGGK HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCC AAPGYYVAKKIIRLINDVAETINHDPAVRDLLKVVFVPNYNVSTAEILIPSCDLSEQIST CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHH AGTEASGTGNMKFALNGALTIGTLDGANIEIREEVGDDNIFIFGHTAQEVSQIKAQGYDP CCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHCCCCC WSWYAADDEMRTVIDMIRDGFFSTEEPDRYRPIADALLGSDTYLVLADFRSYMDAQKAVD CEEEECCHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHCCCCEEEHHHHHHHHHHHHHHH GLYTNQRVWARQAILNIARVGKFSSDRAIHTYAKDIWGVRPMDALS HHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]