| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593578
Identifier: 83593578
GI number: 83593578
Start: 2602476
End: 2603639
Strand: Reverse
Name: 83593578
Synonym: Rru_A2243
Alternate gene names: NA
Gene position: 2603639-2602476 (Counterclockwise)
Preceding gene: 83593579
Following gene: 83593577
Centisome position: 59.81
GC content: 65.03
Gene sequence:
>1164_bases ATGCGGTCTGGTTTCATCGCGACGTTTCAACGGTTTTCCGCCTGGTTGGTCGCTGGGGCCATCGTTCTTGGCGCCCTGGC CGGGCTGATCTATCTGATCGCCGATGCCCTGTTCACCCACAATGCGGATTTCCGCCGCTGGTACAACGTGCTGCGCGCCC AGCCTTATCGCTATGAAGGCATTCAGCCGGTCTATCTGGAAACCGATCCGGCCAGCCTGATCGCCTTGCCCGACGCCGAG GCGGTGGCGGCCAAGCGCCGGGCGATCACCAAGGCGGTGTTCGGTCGGCCCGATCTGCCGCGCGAGGCCCGACCCGATGC CATCGAGCGCGCCATCGATCCCCGGGGCGTCGCCGCCCTCGCGCCCTATGGCGATCCGGCCGTGGTCGCCACGGTCGACC GCTTCAGCGTGGTCGTCGACGAGGCCTTCACCGCCAAGGCCTATCTGCTTCACCCGCTCCGCCCCAACGGCCGGCTGTTC GCCTATCAGCAAGGCTATGCGGGGACCATCGACAAGGCGGCGGGATTGCTGCGACCGCTGCTCGAGCGCGGCTATACGGT GCTGGCGCTCAATTACGTCGGCTATGGCGAGAGCGCCGTGCACCGGCGCCTCTATCCCGGCCATGGGGTCTTCGTGCCCG GGCGCGAACACTTCCTGTTCGATCCCTTGCCGCTGCGCCGCTACCTCCTGCCGATGGTCGCCGGCCTCAATCAGGCGATG GAGGATTTGGGGGTCGGGCAGGCCGATCTGGGCGGCATCTCGGCCGGGGGCTGGGTCACCGTGGTGACGGCGGCGATGGA CGAGCGCATCCGCCGCAGCTATCCGATGGCCGGCGCCTATCCGCTGTATCTTCAGCAGCTCGACCATCATCCGCCGACCG AAGAACAGTATTATCCGCCCCTGGTCCAGGCGGCCGATTATCTGGAACTGTTCGTGCTGGGCGCGGTGGGGCAGGGCCGG GGACAGGTGCAGTTCTTCGGTCAATACGACCGCTGCTGCCAGAACAACCGGCTGTCCGAGCTTTACGCCCCGGCGGTCCG GGCGGCGGTGGACAGGTTGGGTGGTTTTTTTTACACCCATATCAATGATGAAAGCCCCGACCATCGGATCAACGAGGATT ATATCGCCTTGATCCTTGGCGATCTCGACGCTCTTGATAAATAG
Upstream 100 bases:
>100_bases GGCCGATGGACGCCCTCTCCTGATCCTTTAGGCTAAGACTGTGCGAAAAGGGGCGATCCGGCTTTGGGTCGCCCCTCCTT CATTGTTCGGGTAATCCTTC
Downstream 100 bases:
>100_bases AAAGAGCCCCGTCCAACCCCCCTGTGTTTTCTGGAGATTCCGGCCATGACAGAGTCTTCCGACCGCGCTCCCCGACTGAC GGGCGGGTGTCAATGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MRSGFIATFQRFSAWLVAGAIVLGALAGLIYLIADALFTHNADFRRWYNVLRAQPYRYEGIQPVYLETDPASLIALPDAE AVAAKRRAITKAVFGRPDLPREARPDAIERAIDPRGVAALAPYGDPAVVATVDRFSVVVDEAFTAKAYLLHPLRPNGRLF AYQQGYAGTIDKAAGLLRPLLERGYTVLALNYVGYGESAVHRRLYPGHGVFVPGREHFLFDPLPLRRYLLPMVAGLNQAM EDLGVGQADLGGISAGGWVTVVTAAMDERIRRSYPMAGAYPLYLQQLDHHPPTEEQYYPPLVQAADYLELFVLGAVGQGR GQVQFFGQYDRCCQNNRLSELYAPAVRAAVDRLGGFFYTHINDESPDHRINEDYIALILGDLDALDK
Sequences:
>Translated_387_residues MRSGFIATFQRFSAWLVAGAIVLGALAGLIYLIADALFTHNADFRRWYNVLRAQPYRYEGIQPVYLETDPASLIALPDAE AVAAKRRAITKAVFGRPDLPREARPDAIERAIDPRGVAALAPYGDPAVVATVDRFSVVVDEAFTAKAYLLHPLRPNGRLF AYQQGYAGTIDKAAGLLRPLLERGYTVLALNYVGYGESAVHRRLYPGHGVFVPGREHFLFDPLPLRRYLLPMVAGLNQAM EDLGVGQADLGGISAGGWVTVVTAAMDERIRRSYPMAGAYPLYLQQLDHHPPTEEQYYPPLVQAADYLELFVLGAVGQGR GQVQFFGQYDRCCQNNRLSELYAPAVRAAVDRLGGFFYTHINDESPDHRINEDYIALILGDLDALDK >Mature_387_residues MRSGFIATFQRFSAWLVAGAIVLGALAGLIYLIADALFTHNADFRRWYNVLRAQPYRYEGIQPVYLETDPASLIALPDAE AVAAKRRAITKAVFGRPDLPREARPDAIERAIDPRGVAALAPYGDPAVVATVDRFSVVVDEAFTAKAYLLHPLRPNGRLF AYQQGYAGTIDKAAGLLRPLLERGYTVLALNYVGYGESAVHRRLYPGHGVFVPGREHFLFDPLPLRRYLLPMVAGLNQAM EDLGVGQADLGGISAGGWVTVVTAAMDERIRRSYPMAGAYPLYLQQLDHHPPTEEQYYPPLVQAADYLELFVLGAVGQGR GQVQFFGQYDRCCQNNRLSELYAPAVRAAVDRLGGFFYTHINDESPDHRINEDYIALILGDLDALDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42815; Mature: 42815
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGFIATFQRFSAWLVAGAIVLGALAGLIYLIADALFTHNADFRRWYNVLRAQPYRYEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC IQPVYLETDPASLIALPDAEAVAAKRRAITKAVFGRPDLPREARPDAIERAIDPRGVAAL CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEE APYGDPAVVATVDRFSVVVDEAFTAKAYLLHPLRPNGRLFAYQQGYAGTIDKAAGLLRPL CCCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHH LERGYTVLALNYVGYGESAVHRRLYPGHGVFVPGREHFLFDPLPLRRYLLPMVAGLNQAM HHCCCEEEEEEECCCCHHHHHHCCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHHH EDLGVGQADLGGISAGGWVTVVTAAMDERIRRSYPMAGAYPLYLQQLDHHPPTEEQYYPP HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC LVQAADYLELFVLGAVGQGRGQVQFFGQYDRCCQNNRLSELYAPAVRAAVDRLGGFFYTH HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEE INDESPDHRINEDYIALILGDLDALDK CCCCCCCCCCCCCEEEEEEECHHHCCC >Mature Secondary Structure MRSGFIATFQRFSAWLVAGAIVLGALAGLIYLIADALFTHNADFRRWYNVLRAQPYRYEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC IQPVYLETDPASLIALPDAEAVAAKRRAITKAVFGRPDLPREARPDAIERAIDPRGVAAL CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEE APYGDPAVVATVDRFSVVVDEAFTAKAYLLHPLRPNGRLFAYQQGYAGTIDKAAGLLRPL CCCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHH LERGYTVLALNYVGYGESAVHRRLYPGHGVFVPGREHFLFDPLPLRRYLLPMVAGLNQAM HHCCCEEEEEEECCCCHHHHHHCCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHHHHH EDLGVGQADLGGISAGGWVTVVTAAMDERIRRSYPMAGAYPLYLQQLDHHPPTEEQYYPP HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC LVQAADYLELFVLGAVGQGRGQVQFFGQYDRCCQNNRLSELYAPAVRAAVDRLGGFFYTH HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEE INDESPDHRINEDYIALILGDLDALDK CCCCCCCCCCCCCEEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA