| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593548
Identifier: 83593548
GI number: 83593548
Start: 2571302
End: 2573272
Strand: Reverse
Name: 83593548
Synonym: Rru_A2213
Alternate gene names: NA
Gene position: 2573272-2571302 (Counterclockwise)
Preceding gene: 83593549
Following gene: 83593547
Centisome position: 59.12
GC content: 68.85
Gene sequence:
>1971_bases ATGCCCCGCCTGCCCAGACCGCCCGGCTCTTCGACCCTTCGCCCCGGCGCCGTCGCCCTGGGACGGCCCGATCCTGGCCC CGATCTTAACAGCCCCGAAGGGTTGATCCGGGCGGCGCGGGATTGGCTGGGGGCGGGGGATGACCAGCGCGCCCGGCTGG CTTTGGACCGGGCCCTGGCCCTGCGGCCGCGTGCCGCCGAGGCGCTTTTGTTGCGTGGGTTGGTCGATCAGCGGCGGGGC GATCTGGCGGCGGCGGCCGAATGGTTCCGCCGGGCGATCCGGGCGCGCAAGGATTTCGCCGACGCCCATCTCAATCTGGG AAGCTGTCTGATCGGCCTGGGGCAGACCGAGGAGGCGCTGCGCCAGTTCGGTCGGGCGGTGGCCCTGGCGCCGGGCATGG CGCTCGCCCATCTCAATCTCGCCCAGGCCCTGCTTGACCAGGGGGATTTGGGGCGGGCGCGAAGCGCCATCGACCGGGCG CGGGCCCTGGCCCCCGACGCGCTGCCGATCCTGCTGGCCCGGGCGCGCATCCTGGCCGCCCAGGAGGATTACGAAGCGGC CGGCGCTGCCTGGGAAGACTGCGTGGCCCGCGCCCCGGGCGATGTTTTGGTTCTGAACGATGCCGCCAATTTCCTGCTCG AGGACAACCGGGTCGAGGACTCGCTGGCGCTTTATCGGCGGGCGGTGGCCCTGGCGCCGACAAGCCAGGAGGTGCGCAAG AATCTGATCCGCGCCCTGATGACCACCGGCGCCCTTGACGAGGCCGAGGCCGAGGCCGTCGGCTGGCTGGGCACGCAAGG CGAGGATCCGCGCTTCCGTCGGCTGCTTGGCGATGTCCTGGTGCGCGCCGGCCGCTTTCCGGAGGCGCGGAGCGCCTATG TCGCGGCCTGGGACGCCCTGCCCGAAGACGACAATATTCCTTTGGGCCTGACGGCGACGGGCAAGATGAAGAGCGGCGAG GCGCTGGGCGATCGCATCCTGGAGCGGTGGACGGCCCAAGGCGCCGCCGGCGTCGTCTCGGCCGATATCGCCTATGCGGC GGGCAAGGTGCTTGATGATCGCCAGGACTATGACGGCGCCTTCGCCGCCTTCGCCCAAGCAAATCGGCTCAAGGCCGCCG ACCACCCCTTCGACGCCGACGCCCACGACCGCTTCGTCGAGGCGGTGAGCACGGTGTTCACGCCGGCGCTGTTCGAGCGC TTCGCCGGCCTGGGGTCGCCCAGCGAGACGCCGGTTTTGGTGGTCGGCCTGCCGCGCTCGGGCACCACCTTGGTCGAACA GATCATCGCCAGCCATCCCCAAGCCGCCGGGGCGGGCGAACTAACCCATGTCAGCCGCTTCGAGCATTCCTTGCCGTGGC GGGTGGGCGAGGCGGGACGGCGGGGCTATCCGGCCTGTGTCGCCGGTCTGGACGGGGCGATCCTTGATCGCTTCACCGCC CATTATCTGCACGAACTGACCCGAATCGGGCCCAAGGCGCGGCGGGTGGTCGATAAGCTGCCCAACAACTTCCTGCGCCT GGGCTTGTTCGCCCTGGCCTTTCCCAAGGCGCGGATCATCCATTGCCGCCGCGATCTGGTCGATACCTGCCTATCCCTGT ATTTCCAAAGCTTCGCCGGCGGCCACGAATACCGCCACGATCTGGTTTCGCTGGGGCGCTATGCCCGGGCCTATCTGGCG ATGATGGCCCATTGGCGCAGGGTCCTGCCGCTGCCGATGCTTGAGGTCGATTATGCCGACGTGGTCGCCGACCAGGAGAA GGCCAGCCGAACCATGCTGGAGTTCCTCGGTCTGGCCTGGGATGAGGTGGTTCTAAGGTTCCATAAGCGGGAGGCGACGG TGGCGACGGCCAGCCGCTGGCAGGTGCGCCAGCCGATCTATGCAACCTCGGTCGCCCGCTGGCGCCGCTACGAACAGCAT CTCTCACCGCTTCTATTAAGCCTTGAAGGGAAAAAACCGTCCAAGGGGTAA
Upstream 100 bases:
>100_bases CGTGCCCGCTTGCCTAGCCGACGGGGGGTGACGCTTCCCCGTTCCTCCCGTTCCCTCACGCCGCTCCGCTGCCGCTTCTC CTTGATAAGGACTCACCGCG
Downstream 100 bases:
>100_bases AAGACTGTGGTGTTTATGCCACTCGGCAAGGGAAACGCCGGGCGCGTCCGTCTGGGAAATTGACCACTCCGTAGAAAAGC GGCTTATTTGTTCGGGGATA
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MPRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRG DLAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRA RALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRK NLIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDALPEDDNIPLGLTATGKMKSGE ALGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGAFAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFER FAGLGSPSETPVLVVGLPRSGTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTA HYLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAGGHEYRHDLVSLGRYARAYLA MMAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAWDEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQH LSPLLLSLEGKKPSKG
Sequences:
>Translated_656_residues MPRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRG DLAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRA RALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRK NLIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDALPEDDNIPLGLTATGKMKSGE ALGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGAFAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFER FAGLGSPSETPVLVVGLPRSGTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTA HYLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAGGHEYRHDLVSLGRYARAYLA MMAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAWDEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQH LSPLLLSLEGKKPSKG >Mature_655_residues PRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRGD LAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRAR ALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRKN LIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDALPEDDNIPLGLTATGKMKSGEA LGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGAFAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFERF AGLGSPSETPVLVVGLPRSGTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTAH YLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAGGHEYRHDLVSLGRYARAYLAM MAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAWDEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQHL SPLLLSLEGKKPSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=366, Percent_Identity=24.5901639344262, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI32307148, Length=366, Percent_Identity=24.5901639344262, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115532690, Length=332, Percent_Identity=23.7951807228916, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115532692, Length=332, Percent_Identity=23.7951807228916, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17647755, Length=366, Percent_Identity=24.8633879781421, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24585827, Length=366, Percent_Identity=24.8633879781421, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24585829, Length=366, Percent_Identity=24.8633879781421, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 71622; Mature: 71490
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRPRAAEALLLRGLVDQRRGDLAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEAL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCHHHH RQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRARALAPDALPILLARARILAA HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRK HHHHHHHCCHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH NLIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDAL HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHECCCC PEDDNIPLGLTATGKMKSGEALGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGA CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHH FAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFERFAGLGSPSETPVLVVGLPRS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC GTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTA CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH HYLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAG HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC GHEYRHDLVSLGRYARAYLAMMAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCHH DEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQHLSPLLLSLEGKKPSKG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC >Mature Secondary Structure PRLPRPPGSSTLRPGAVALGRPDPGPDLNSPEGLIRAARDWLGAGDDQRARLALDRALA CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRPRAAEALLLRGLVDQRRGDLAAAAEWFRRAIRARKDFADAHLNLGSCLIGLGQTEEAL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCHHHH RQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRARALAPDALPILLARARILAA HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDNRVEDSLALYRRAVALAPTSQEVRK HHHHHHHCCHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH NLIRALMTTGALDEAEAEAVGWLGTQGEDPRFRRLLGDVLVRAGRFPEARSAYVAAWDAL HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHECCCC PEDDNIPLGLTATGKMKSGEALGDRILERWTAQGAAGVVSADIAYAAGKVLDDRQDYDGA CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHH FAAFAQANRLKAADHPFDADAHDRFVEAVSTVFTPALFERFAGLGSPSETPVLVVGLPRS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC GTTLVEQIIASHPQAAGAGELTHVSRFEHSLPWRVGEAGRRGYPACVAGLDGAILDRFTA CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH HYLHELTRIGPKARRVVDKLPNNFLRLGLFALAFPKARIIHCRRDLVDTCLSLYFQSFAG HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC GHEYRHDLVSLGRYARAYLAMMAHWRRVLPLPMLEVDYADVVADQEKASRTMLEFLGLAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCHH DEVVLRFHKREATVATASRWQVRQPIYATSVARWRRYEQHLSPLLLSLEGKKPSKG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]