| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is mrp [H]
Identifier: 83593539
GI number: 83593539
Start: 2559473
End: 2560621
Strand: Direct
Name: mrp [H]
Synonym: Rru_A2204
Alternate gene names: 83593539
Gene position: 2559473-2560621 (Clockwise)
Preceding gene: 83593532
Following gene: 83593540
Centisome position: 58.8
GC content: 67.54
Gene sequence:
>1149_bases ATGGCAAGCGTAACCCGGGACGATGTTCTTGGCGCCCTCACGCGGATCGTTCCGCCCGGGGCCGACCACGACGTGGTTTC CCTGGGCTGGATCGACGGCGTCGCCATCCAGCCCGGCGGTCTGGTCAGCGTCTCGCTGGCCGTGCCCGCCGCCCTTGGCC CCTCGCTCGAACCGCTTTCGCGCCAGGCCGAAGATGCGCTACGCGCCCTGGCCGGCGTGACCCGGGCCACCGTCATCTTG ACCGCCCAGCGTCCGCCCCAGGCGGAGAACGCCCAACAACGTCCGCCCCAGGCGGAGAAAAAGCCGCAGCCGGGCGCCGG GGGCCATGGCCACGCCACGTCGCAGGCCCGCATCGAGTTGCCCGGGGTGCGCCACATCATCGCCGTGGCCTCGGGCAAGG GCGGGGTGGGAAAATCCACGACCGCGGTCAATCTGGCCCTGGGGCTGACGGCGCTTGGCCTGAAAGTGGCGCTGTTTGAC GCCGACATCTATGGCCCGTCGATCCCGCGCATGTTGGGCGTCGCCTCGGTCAAGCCGGTGGCCAACGGCAAAAAGGTGAT GCCGGTGACCAATCATGGGCTGTCGATGATGTCGATCGGCTTCATGATCGCCGAAGACGATCCGATCATCTGGCGCGGAC CGATGGTGATGGGGGCGCTTGAACAGTTGCTGCGCGATGTCGACTGGGGCACGCAGGACGTGATGGTGGTCGATATGCCA CCGGGCACCGGCGATACCCAACTCACCATGTGCCAGCGCGTCGCCTTATCGGGGGCGGTGATCGTCTCCACCCCCCAAGA TATCGCCCTGCTTGATGCGAAGCGCGGTCTGGCGATGTTCCGCCGGGTCGATGTGCCGGTGCTCGGGCTGATCGAGAACA TGAGCTATCACCTGTGCACGAACTGCGGCCACCGCGAGGATGTCTTCAGCCACGGCGGGGCGCGGCGCACGGCCCAAGAG CTTGGCGTACCGTTCCTGGGCGAACTACCGCTCGACATCCGCATCCGCAGCGGCTCCGACGAGGGTATGCCGATCACGCT TTCCGACCCCGAGGGTGATCACGCCCTCGCCTATAAGGCCATCGCCCGGGCGGTCTGGACCAGCCTGGAAAGCGCCGCGC CGGCCGCGCCAAACGTCGGGTCTCAATGA
Upstream 100 bases:
>100_bases TGGGGCAAAGGTCGCGACCCAAGCCCCTGTCGTTCCCCCTGCACTCCACGCCCGACGGCGGCGTCTTCCATATCGGTCCA ACGCGAAGGGGTTTCAACAA
Downstream 100 bases:
>100_bases CCCCCGAATCACCAGGGCGGGCGTTTCCGATTTCGGGGGCTTTGCATCGGCGACGATCCCCCCTATATTGGGGGTGCCGG CTTGTCCGGCTATGACGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MASVTRDDVLGALTRIVPPGADHDVVSLGWIDGVAIQPGGLVSVSLAVPAALGPSLEPLSRQAEDALRALAGVTRATVIL TAQRPPQAENAQQRPPQAEKKPQPGAGGHGHATSQARIELPGVRHIIAVASGKGGVGKSTTAVNLALGLTALGLKVALFD ADIYGPSIPRMLGVASVKPVANGKKVMPVTNHGLSMMSIGFMIAEDDPIIWRGPMVMGALEQLLRDVDWGTQDVMVVDMP PGTGDTQLTMCQRVALSGAVIVSTPQDIALLDAKRGLAMFRRVDVPVLGLIENMSYHLCTNCGHREDVFSHGGARRTAQE LGVPFLGELPLDIRIRSGSDEGMPITLSDPEGDHALAYKAIARAVWTSLESAAPAAPNVGSQ
Sequences:
>Translated_382_residues MASVTRDDVLGALTRIVPPGADHDVVSLGWIDGVAIQPGGLVSVSLAVPAALGPSLEPLSRQAEDALRALAGVTRATVIL TAQRPPQAENAQQRPPQAEKKPQPGAGGHGHATSQARIELPGVRHIIAVASGKGGVGKSTTAVNLALGLTALGLKVALFD ADIYGPSIPRMLGVASVKPVANGKKVMPVTNHGLSMMSIGFMIAEDDPIIWRGPMVMGALEQLLRDVDWGTQDVMVVDMP PGTGDTQLTMCQRVALSGAVIVSTPQDIALLDAKRGLAMFRRVDVPVLGLIENMSYHLCTNCGHREDVFSHGGARRTAQE LGVPFLGELPLDIRIRSGSDEGMPITLSDPEGDHALAYKAIARAVWTSLESAAPAAPNVGSQ >Mature_381_residues ASVTRDDVLGALTRIVPPGADHDVVSLGWIDGVAIQPGGLVSVSLAVPAALGPSLEPLSRQAEDALRALAGVTRATVILT AQRPPQAENAQQRPPQAEKKPQPGAGGHGHATSQARIELPGVRHIIAVASGKGGVGKSTTAVNLALGLTALGLKVALFDA DIYGPSIPRMLGVASVKPVANGKKVMPVTNHGLSMMSIGFMIAEDDPIIWRGPMVMGALEQLLRDVDWGTQDVMVVDMPP GTGDTQLTMCQRVALSGAVIVSTPQDIALLDAKRGLAMFRRVDVPVLGLIENMSYHLCTNCGHREDVFSHGGARRTAQEL GVPFLGELPLDIRIRSGSDEGMPITLSDPEGDHALAYKAIARAVWTSLESAAPAAPNVGSQ
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=254, Percent_Identity=53.1496062992126, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI118572611, Length=262, Percent_Identity=39.6946564885496, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI6912540, Length=263, Percent_Identity=39.1634980988593, Blast_Score=181, Evalue=1e-45, Organism=Escherichia coli, GI87082045, Length=361, Percent_Identity=41.8282548476454, Blast_Score=273, Evalue=2e-74, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=37.890625, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322188, Length=222, Percent_Identity=38.7387387387387, Blast_Score=183, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6321347, Length=232, Percent_Identity=41.8103448275862, Blast_Score=172, Evalue=9e-44, Organism=Drosophila melanogaster, GI221511043, Length=245, Percent_Identity=39.5918367346939, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24667611, Length=223, Percent_Identity=39.9103139013453, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI19921440, Length=236, Percent_Identity=38.135593220339, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 39872; Mature: 39740
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVTRDDVLGALTRIVPPGADHDVVSLGWIDGVAIQPGGLVSVSLAVPAALGPSLEPLS CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCEEEEEEECCHHCCCCCCHHH RQAEDALRALAGVTRATVILTAQRPPQAENAQQRPPQAEKKPQPGAGGHGHATSQARIEL HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEC PGVRHIIAVASGKGGVGKSTTAVNLALGLTALGLKVALFDADIYGPSIPRMLGVASVKPV CCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCC ANGKKVMPVTNHGLSMMSIGFMIAEDDPIIWRGPMVMGALEQLLRDVDWGTQDVMVVDMP CCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECC PGTGDTQLTMCQRVALSGAVIVSTPQDIALLDAKRGLAMFRRVDVPVLGLIENMSYHLCT CCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHC NCGHREDVFSHGGARRTAQELGVPFLGELPLDIRIRSGSDEGMPITLSDPEGDHALAYKA CCCCHHHHHHCCCCHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHH IARAVWTSLESAAPAAPNVGSQ HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ASVTRDDVLGALTRIVPPGADHDVVSLGWIDGVAIQPGGLVSVSLAVPAALGPSLEPLS CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCEEEEEEECCHHCCCCCCHHH RQAEDALRALAGVTRATVILTAQRPPQAENAQQRPPQAEKKPQPGAGGHGHATSQARIEL HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEC PGVRHIIAVASGKGGVGKSTTAVNLALGLTALGLKVALFDADIYGPSIPRMLGVASVKPV CCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCC ANGKKVMPVTNHGLSMMSIGFMIAEDDPIIWRGPMVMGALEQLLRDVDWGTQDVMVVDMP CCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECC PGTGDTQLTMCQRVALSGAVIVSTPQDIALLDAKRGLAMFRRVDVPVLGLIENMSYHLCT CCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHC NCGHREDVFSHGGARRTAQELGVPFLGELPLDIRIRSGSDEGMPITLSDPEGDHALAYKA CCCCHHHHHHCCCCHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHH IARAVWTSLESAAPAAPNVGSQ HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]