| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 83593506
GI number: 83593506
Start: 2521197
End: 2522309
Strand: Direct
Name: livK [C]
Synonym: Rru_A2171
Alternate gene names: 83593506
Gene position: 2521197-2522309 (Clockwise)
Preceding gene: 83593505
Following gene: 83593514
Centisome position: 57.92
GC content: 66.13
Gene sequence:
>1113_bases ATGCGCACGCTGCATAAGGCGGTGTTCTCGGTTACCGTCTCCGCCTTGGCCATCTCGCCCTTGCCCGCCCTTGCCGATAT TCCCGTGGGCCTCGCCCTCGGCCTGACCGGGCAGATCGCCGCCATCGGCGAACAGTCCCGCCGGGGCGCCGAAGCCGCGA TCGCCGCTTTCAACAAGGCCGGCGGACTGAAGGGCGAGACCATCACCCTTCAGGTCGAAGATGACGCCTGCGACCCCAAG CAGGGAGTGGCTGTGGCCAATAAGTTCGTCTCCGCCGGGGTTGAGGCGGTGATCGGCCATATGTGCACCGGCCCGACCAT GGCCGCCTCGACGGTCTATTCCGAAGAAGAGATCCCGATGGTCACCGCCTCGGCGACCGGACCGGATCTGACCGAACGCG GGCTGACCAATGTCTTCCGGGCCACCGGTCGCGACGATCAGCAAGGCACCATCGCCGGCAAGATGATCGCCGAGCGCTTC GCCGATCAGACGACGGCCATCGTCCACGACAAGCAGGCCTATGGCCGCGGTCTGGCCGAGGAAGCCAAGAAGGCGATGAA CGCCGCGGGCAAGGAAGAAGCGCTGTTCGCCGCCATCGTGCCCGGCGAGCAGGATTTCTCGGCGCTGATCTCGCGTCTCA AGCAGGCCGGGGTGAAGGTCGTTTACTACGGCGGCTATTACAACGACCTGGGCCAGATCGTCCGCCAGTCGCGCGCCCAG GGCCTGGACGCCGTGTTCGTCGGCGGTGACGGCCTGTCGTCGTCGGAATTCTGGGCGATCACCGGCGAGGCCGGCGAAGG CACCTTGTTCACCTTCACCCCCGACGCCTCGACCAATCCGGCGGCCAAGGAAGCGGTCGAAGCCTTCAAGGCCGATGGCA AGGGCGACGCCGACAACTTCGCCTATTACTACTACGCCGCCGCCCAGGTGCTGACCCAGGCGATGGCCAAGGCCGGTTCG GCCGACCCGGAAGCGGTGACCAAGGCCCTGCGCGACAATACCTTCGAGACCGTCGCCGGTCCGATGGATTTCGACGCCAA GGGCGATCTGACCGCCCCGGCCTTCGTTTTCTATCAGTGGAGCGCCGGCAAGCCCAAGCCCGCCGCCTTCTAA
Upstream 100 bases:
>100_bases TCGAAAGTGTTGAATCGACCGGAGGTGGCGATTACCCTTTGGCGGTTTCCAGGAGGGCCCCTCCTCGCGGCGCCCCCATA CCGCAACAGAGGATAGAATC
Downstream 100 bases:
>100_bases AACCGTTTGGACCTTACGGTCACAGAAAGGCCCCGTCGGCGCGATCCGGCGGGGCCTTTTCTTTAACTGGTCTCTAGCGG CCTCGCCCCAGGGTCCACAG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVEDDACDPK QGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERF ADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQVLTQAMAKAGS ADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQWSAGKPKPAAF
Sequences:
>Translated_370_residues MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVEDDACDPK QGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERF ADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQVLTQAMAKAGS ADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQWSAGKPKPAAF >Mature_370_residues MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVEDDACDPK QGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERF ADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQVLTQAMAKAGS ADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQWSAGKPKPAAF
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=348, Percent_Identity=43.1034482758621, Blast_Score=285, Evalue=5e-78, Organism=Escherichia coli, GI48994941, Length=362, Percent_Identity=41.4364640883978, Blast_Score=275, Evalue=4e-75,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 38536; Mature: 38536
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKA CCHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCCEEHHCCHHHCCHHHHHHHHHHC GGLKGETITLQVEDDACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPM CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCE VTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAE EEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHEEECHHHHCCCHHH EAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ HHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHC GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNF CCCEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCE AYYYYAAAQVLTQAMAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQW EHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEE SAGKPKPAAF CCCCCCCCCC >Mature Secondary Structure MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKA CCHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCCEEHHCCHHHCCHHHHHHHHHHC GGLKGETITLQVEDDACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPM CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCE VTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAE EEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHEEECHHHHCCCHHH EAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ HHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHC GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNF CCCEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCE AYYYYAAAQVLTQAMAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQW EHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEE SAGKPKPAAF CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA