| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593501
Identifier: 83593501
GI number: 83593501
Start: 2514791
End: 2516128
Strand: Reverse
Name: 83593501
Synonym: Rru_A2166
Alternate gene names: NA
Gene position: 2516128-2514791 (Counterclockwise)
Preceding gene: 83593504
Following gene: 83593500
Centisome position: 57.8
GC content: 69.96
Gene sequence:
>1338_bases GTGACGGCGGGCAGTCCGACCGAAGCCCGCCAGAAAGCCATCAACGATGGTCAGGTCAAGGCGCTTCGCGCCTTGCTCGA ATCGTTGACCACCGAGGGCGATCACGCCCGGCTGCCCGCCGTGACGGCGCGCGATGCCGACGCCATGGTCGTCGACTTCG GTCTGGCCAATGAAAAGACCGCCGCCAAGCGCTATCTGGCGACTCTGAACGTCCGCTTCAACGCCGCCATGGTCGACCGT CTGCTGGCGTCGAGCGGCATCGGTCACGCCACCACCCGCGACGCGCCGGTGCTGGTGCTGCCGGTCTACCAGCCCCAGCC GTCCGACCCGCCGCAGCTGTGGGAAGACACCAATCCCTGGAATGAAGCCTGGAATAAACAGACCGGCCTTTCCGAGGGGC TGGTTCCCCTGGTGCTCGGCCTGGGCGATATCGAGGATATCTCGGCCCTGGACGGCAAGCGGGCGCTGAGCGCCGATGCC GCCGCCAGCGGTCTGGCCCAGCGCTACGGCGCCTCCGATGTGTTGGTGCTCAAGGCCGAAGGCACGGCGGAAAGCGGGCT GACCATCACCGCCGTGGGCGGCGGTCCGTTTTCGGCGATGGCCCCGGTCAGTGTCGAGCCCGGTCCCCAGGCCTTCAAGA CCGCCGTCGCCAAGGCGCGCGCCGCGCTGGAGACCGCGTGGAAGACTCAAGGGGGGAAGAATGCCGGCGCGGCGGCGACG GCGGGGGTCAGCGACATGCCGGCCTTTGGCGGTGGCGCCGGGGTTCCCCAACCCGGTCAAGACAGCTATGCGACGGTGTC GGGCGCTGGAACGACCTATTCCTCGACCGCCCCGACTCCGGTGGCCCCGGCCTGGGGCTATGGCGAGAGCGCGGCCGCTC CCGGCGCGTCGGGCTATGGCGCCGCTGCCGGTGCGTCGGGCTATGGCGCCGCTCCCGGCGCGTCAGGCTATGGCGCCGCT CCCGGCGCTTCGGGCTATGGCGCCGTTCCCGGCGCGTCGGGCTATGGCGCCGCTCCCGGCGTGCCGCCCTATGGTCAAAC GCAAACCATGGCCGGCGGCATGGTGGTGGTGGCGCGTTATGCCAATCTGGCCGAATGGGTGGAGATGCGGCGCAAGCTGC AGGGGCTGCCCGGCGTCACCGCCCTCAATCTCCAGGCGGTCACGCGCAATCAGGCGCAGATCAATCTGGGCTATGGTGGA TCGCCGATGGAGCTGGCCCAGGTTCTGCTGGGGCGCGGCTTGCGGCTGAGCGAAAGCGCCGGCCTGTGGACCTTGGAAAG CATGGGTGGGGCGACCCCGGGACTGGCGCCGGTCGGCGCCACCCCGGGTTTGAATTGA
Upstream 100 bases:
>100_bases GGTCGCGGCTTTGCTGATGGCCCTTGCCCCGCTTGGGCCGATGGCGACCGCTCCGGCCTGGGCCGCCGATGCCTATAAGG CGCCGCCGATCAATGTCGAT
Downstream 100 bases:
>100_bases GGGCGCCGTCGGCATGACCTCGCTTCGCAGACGCTGCATCCGTCAGGTGCCCAACACCTTGACGGTGGGACGTTTCGCCC TGGTCCCGGTGGCCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTAGSPTEARQKAINDGQVKALRALLESLTTEGDHARLPAVTARDADAMVVDFGLANEKTAAKRYLATLNVRFNAAMVDR LLASSGIGHATTRDAPVLVLPVYQPQPSDPPQLWEDTNPWNEAWNKQTGLSEGLVPLVLGLGDIEDISALDGKRALSADA AASGLAQRYGASDVLVLKAEGTAESGLTITAVGGGPFSAMAPVSVEPGPQAFKTAVAKARAALETAWKTQGGKNAGAAAT AGVSDMPAFGGGAGVPQPGQDSYATVSGAGTTYSSTAPTPVAPAWGYGESAAAPGASGYGAAAGASGYGAAPGASGYGAA PGASGYGAVPGASGYGAAPGVPPYGQTQTMAGGMVVVARYANLAEWVEMRRKLQGLPGVTALNLQAVTRNQAQINLGYGG SPMELAQVLLGRGLRLSESAGLWTLESMGGATPGLAPVGATPGLN
Sequences:
>Translated_445_residues MTAGSPTEARQKAINDGQVKALRALLESLTTEGDHARLPAVTARDADAMVVDFGLANEKTAAKRYLATLNVRFNAAMVDR LLASSGIGHATTRDAPVLVLPVYQPQPSDPPQLWEDTNPWNEAWNKQTGLSEGLVPLVLGLGDIEDISALDGKRALSADA AASGLAQRYGASDVLVLKAEGTAESGLTITAVGGGPFSAMAPVSVEPGPQAFKTAVAKARAALETAWKTQGGKNAGAAAT AGVSDMPAFGGGAGVPQPGQDSYATVSGAGTTYSSTAPTPVAPAWGYGESAAAPGASGYGAAAGASGYGAAPGASGYGAA PGASGYGAVPGASGYGAAPGVPPYGQTQTMAGGMVVVARYANLAEWVEMRRKLQGLPGVTALNLQAVTRNQAQINLGYGG SPMELAQVLLGRGLRLSESAGLWTLESMGGATPGLAPVGATPGLN >Mature_444_residues TAGSPTEARQKAINDGQVKALRALLESLTTEGDHARLPAVTARDADAMVVDFGLANEKTAAKRYLATLNVRFNAAMVDRL LASSGIGHATTRDAPVLVLPVYQPQPSDPPQLWEDTNPWNEAWNKQTGLSEGLVPLVLGLGDIEDISALDGKRALSADAA ASGLAQRYGASDVLVLKAEGTAESGLTITAVGGGPFSAMAPVSVEPGPQAFKTAVAKARAALETAWKTQGGKNAGAAATA GVSDMPAFGGGAGVPQPGQDSYATVSGAGTTYSSTAPTPVAPAWGYGESAAAPGASGYGAAAGASGYGAAPGASGYGAAP GASGYGAVPGASGYGAAPGVPPYGQTQTMAGGMVVVARYANLAEWVEMRRKLQGLPGVTALNLQAVTRNQAQINLGYGGS PMELAQVLLGRGLRLSESAGLWTLESMGGATPGLAPVGATPGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44414; Mature: 44283
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGSPTEARQKAINDGQVKALRALLESLTTEGDHARLPAVTARDADAMVVDFGLANEKT CCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCHH AAKRYLATLNVRFNAAMVDRLLASSGIGHATTRDAPVLVLPVYQPQPSDPPQLWEDTNPW HHHHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCH NEAWNKQTGLSEGLVPLVLGLGDIEDISALDGKRALSADAAASGLAQRYGASDVLVLKAE HHHHCCCCCCCCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC GTAESGLTITAVGGGPFSAMAPVSVEPGPQAFKTAVAKARAALETAWKTQGGKNAGAAAT CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AGVSDMPAFGGGAGVPQPGQDSYATVSGAGTTYSSTAPTPVAPAWGYGESAAAPGASGYG CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAAGASGYGAAPGASGYGAAPGASGYGAVPGASGYGAAPGVPPYGQTQTMAGGMVVVARY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH ANLAEWVEMRRKLQGLPGVTALNLQAVTRNQAQINLGYGGSPMELAQVLLGRGLRLSESA HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCEEECCC GLWTLESMGGATPGLAPVGATPGLN CEEEEHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAGSPTEARQKAINDGQVKALRALLESLTTEGDHARLPAVTARDADAMVVDFGLANEKT CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCHH AAKRYLATLNVRFNAAMVDRLLASSGIGHATTRDAPVLVLPVYQPQPSDPPQLWEDTNPW HHHHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCH NEAWNKQTGLSEGLVPLVLGLGDIEDISALDGKRALSADAAASGLAQRYGASDVLVLKAE HHHHCCCCCCCCCCHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC GTAESGLTITAVGGGPFSAMAPVSVEPGPQAFKTAVAKARAALETAWKTQGGKNAGAAAT CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AGVSDMPAFGGGAGVPQPGQDSYATVSGAGTTYSSTAPTPVAPAWGYGESAAAPGASGYG CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAAGASGYGAAPGASGYGAAPGASGYGAVPGASGYGAAPGVPPYGQTQTMAGGMVVVARY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH ANLAEWVEMRRKLQGLPGVTALNLQAVTRNQAQINLGYGGSPMELAQVLLGRGLRLSESA HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCEEECCC GLWTLESMGGATPGLAPVGATPGLN CEEEEHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA