| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is mrcA [H]
Identifier: 83593482
GI number: 83593482
Start: 2491117
End: 2493612
Strand: Reverse
Name: mrcA [H]
Synonym: Rru_A2147
Alternate gene names: 83593482
Gene position: 2493612-2491117 (Counterclockwise)
Preceding gene: 83593483
Following gene: 229260092
Centisome position: 57.29
GC content: 65.3
Gene sequence:
>2496_bases ATGATTCGGATTCTGCTGACCCTGGTCATGATCGGCATGGTCGGCGGCGCCGGCGGCACGGCCTATCTGCTCAATTCCTA TGGGAGCGACCTGCCCGATTACGGCGCCCTGGCCAATTACGAGCCGCCGATCACCACTCGGGTTCTGGCCAGCGATGGCC GTTTGATGGCGGAATACGCCATCGAAAAGCGGGTCTATGTGCCGATCAACGCCATTCCCCAGAAGGTCAAGGACGCCTTT TTGTCGGCCGAGGACAAGAACTTCTACACCCACTCGGGCGTGGATTTCGTCGGGCTGTTCCGCGCCGTGCTGACCAATCT GCAGAACTATGGCTCGGGCCGGCGGCCGGTCGGCGCCTCGACCATCACCCAGCAGGTGGCCAAGAACTTTCTGCTGACCA ACGAGGTGTCCTTTGATCGCAAGGTCAAGGAAGCCATCTTGGCCTTCCGCATCGAGGAGGCCTTTTCCAAGGATCACATT CTGGAACTGTATCTGAACGAGATCTATCTCGGCTTCAGTTCCTATGGGGTGGCCGCGGCGGCGGTGAACTACTTCAACAA AAGCCTTGATGAGCTGACCATCGGCGAGGTCGCCTTCCTCGCCGCCTTGCCCAAGGCCCCCAACAACTACAATCCGGTGC GCAAGAACGACGCGGCCAAGGCCCGTCGCGACTGGGTGGTCGACCGCATGGTCGAGGATGATCACATCACCCAGGCCGAG GGCGAAGCGGCCAAGGCCGAGCCCCTGGAGGTGCGCAGCCGTGACGAGACCCAGCTTGTGCGCCATGCCGACTTCTTCTC GGAAGAGGTCCGCCGACAGCTGCAAAGCCGCTATGGCGAAGAGGCGCTTTACAAGGGCGGGCTTTACGTGCGCACCACCC TTGATCCCCGCCTTCAGGAGATCGGGGCGCGGGCCCTGCGCAAGGGGCTGATCGATTACGATCGCCGCCATGGCTGGCGC GGCCCGGTGACCCGCCTGGAAAACGTTCAGGAATGGAAGGCGCGTCTGGCCGAATTGCCCGTTCCCCCCGGCGCCTCGAC CAACTGGCGGTTGGCCGCCGTGCTGCGGCTTGATGCCGGCGAGGTCAAGCTTGGCCTGCCCGACGGCTTCGGCGGCGCCA TCCCGATGAAGGAAATGGCCTGGGCCCGGCCGACGCTCGACGGTCAGCGGGTGGGCAACGCCCCCAAGAAGCCCGCCGAT GTCTTGAAGGTTGGCGATGTCGTGCTGGTCGAGCCTTTGGAGAAGGACGACAAGGGCAAGGCCTATGCGCCCGGAACCTA TGGCTTGCGCCAGATGCCCAATGTCGAAGGCGCCCTGGTCGCCATGGATCCCCATACCGGCCGGGTGATGGCGATGGTCG GCGGCTTCGCGCCCGAGCGCAGCGAGTTCAACCGGGCGATCCAGGCCAAGCGCCAGCCCGGCTCGTCGTTCAAGCCCTTC GTCTATCTGGCCGCCCTCGATCACGGCTATACGCCGGCGACCATCATCCTTGACGCGCCGTTCGTCTATGATCCGGGCCC CGGCCAACCCTTGTGGAAGCCTAAGAACTACAGCGGCCAGTTCTACGGCCCCTCGACCCTGCGTCGGGGTGTCGAGATGT CGCGTAACCTGATGACGGTGCGTCTGGCCAATGCGGTGGGCATGGATGTGGTCGCCGAATATGCCGAGCGCTTCGGCGTC GTCCACACCATGCCGCGCGTCCTCGCCGCCTCGCTCGGCGCCGTCGAGACCACGGTGATGGACATGACGACGGCCTATGC GATGCTGGTCAATGGCGGGCGGCGGATCGCCCCGACGCTGATCGACCGCATCCAGGACCGCACCGGCACCACCGTCTATC GCCATGACGAGCGGCCCTGCGATGCCTGCAAGGCGTCGCAATGGGCGGGTCAGGCCGTGCCGGCGGTCGTTGACAATCGC GAGATCATGACCGATCCGCTGTCGGCCTATCAGATCGTGTCGATCCTTCAGGGCGTCGTCCAGCGCGGCACCGGCGGCAA AGTCCAGGCGGTGGGCAAATCGGTCGCCGGCAAGACCGGCACCTCGAACGACAGCCTCGATACTTGGTTCGTCGGCTTTT CGCCCGATCTGGTCTGCGGGGTCTTCGTCGGCTTCGACGAGCCCAAGTCCCTGGGGTCCCATGAGGCCGGGTCGACGACG GCGGCGCCGATCTTCACGACCTTCATGAAGGAAGCCCTGGCCGACAAGCCCGATATTCCCTTCCGCGTGCCCGAGGGTAT CAAATTCGTCCGCATCGATCCCCAGACCGGCCAGCGCGCCGGCCCGGGAACCTCCAACGCCATCCTTGAGGCCTTCAAGC CGGGATCCGAGCCCTCGCTGGCCTCGAGTTATGTGATCGACGGATCGGCGCCGGTGGGCGATTACGGCGCCTATTACGGC GGCGTCGGCGGCGAGGGCGCCACCGGCGTTCCCGGTCAGGCGGCCCCGGGCTTCGGCGCCGGTGGCGCCCCGCCCCAGGC GGGCGGCCTTTATTAG
Upstream 100 bases:
>100_bases GTCCGAAGTCTGGCGATCGGCGGAGCCTATGCGGCGCACCAGTTCCCCTCCCGGCGATCCCCCTGGGACGCCCCCTGATA AAAAGCGTGGATATCCTGCG
Downstream 100 bases:
>100_bases ACCAACGCCCCGAGAGTGAACGTTTAGAGCGGGGGGCGTGAACCCGATTTTACGCCTCCCGCTCTCAGACCGCTCCTTTG GCGGGCCGGGGTCAGGCGCG
Product: penicillin-binding protein 1A
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MIRILLTLVMIGMVGGAGGTAYLLNSYGSDLPDYGALANYEPPITTRVLASDGRLMAEYAIEKRVYVPINAIPQKVKDAF LSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGASTITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHI LELYLNEIYLGFSSYGVAAAAVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHITQAE GEAAKAEPLEVRSRDETQLVRHADFFSEEVRRQLQSRYGEEALYKGGLYVRTTLDPRLQEIGARALRKGLIDYDRRHGWR GPVTRLENVQEWKARLAELPVPPGASTNWRLAAVLRLDAGEVKLGLPDGFGGAIPMKEMAWARPTLDGQRVGNAPKKPAD VLKVGDVVLVEPLEKDDKGKAYAPGTYGLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPF VYLAALDHGYTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTVRLANAVGMDVVAEYAERFGV VHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTLIDRIQDRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNR EIMTDPLSAYQIVSILQGVVQRGTGGKVQAVGKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTT AAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEPSLASSYVIDGSAPVGDYGAYYG GVGGEGATGVPGQAAPGFGAGGAPPQAGGLY
Sequences:
>Translated_831_residues MIRILLTLVMIGMVGGAGGTAYLLNSYGSDLPDYGALANYEPPITTRVLASDGRLMAEYAIEKRVYVPINAIPQKVKDAF LSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGASTITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHI LELYLNEIYLGFSSYGVAAAAVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHITQAE GEAAKAEPLEVRSRDETQLVRHADFFSEEVRRQLQSRYGEEALYKGGLYVRTTLDPRLQEIGARALRKGLIDYDRRHGWR GPVTRLENVQEWKARLAELPVPPGASTNWRLAAVLRLDAGEVKLGLPDGFGGAIPMKEMAWARPTLDGQRVGNAPKKPAD VLKVGDVVLVEPLEKDDKGKAYAPGTYGLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPF VYLAALDHGYTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTVRLANAVGMDVVAEYAERFGV VHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTLIDRIQDRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNR EIMTDPLSAYQIVSILQGVVQRGTGGKVQAVGKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTT AAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEPSLASSYVIDGSAPVGDYGAYYG GVGGEGATGVPGQAAPGFGAGGAPPQAGGLY >Mature_831_residues MIRILLTLVMIGMVGGAGGTAYLLNSYGSDLPDYGALANYEPPITTRVLASDGRLMAEYAIEKRVYVPINAIPQKVKDAF LSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGASTITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHI LELYLNEIYLGFSSYGVAAAAVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHITQAE GEAAKAEPLEVRSRDETQLVRHADFFSEEVRRQLQSRYGEEALYKGGLYVRTTLDPRLQEIGARALRKGLIDYDRRHGWR GPVTRLENVQEWKARLAELPVPPGASTNWRLAAVLRLDAGEVKLGLPDGFGGAIPMKEMAWARPTLDGQRVGNAPKKPAD VLKVGDVVLVEPLEKDDKGKAYAPGTYGLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPF VYLAALDHGYTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTVRLANAVGMDVVAEYAERFGV VHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTLIDRIQDRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNR EIMTDPLSAYQIVSILQGVVQRGTGGKVQAVGKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTT AAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEPSLASSYVIDGSAPVGDYGAYYG GVGGEGATGVPGQAAPGFGAGGAPPQAGGLY
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=858, Percent_Identity=35.0815850815851, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1786343, Length=253, Percent_Identity=35.1778656126482, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1788867, Length=261, Percent_Identity=30.6513409961686, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789601, Length=167, Percent_Identity=35.9281437125749, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 89829; Mature: 89829
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILLTLVMIGMVGGAGGTAYLLNSYGSDLPDYGALANYEPPITTRVLASDGRLMAEYA CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH IEKRVYVPINAIPQKVKDAFLSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGAS HHCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHH TITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHILELYLNEIYLGFSSYGVAAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHH AVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHITQAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC GEAAKAEPLEVRSRDETQLVRHADFFSEEVRRQLQSRYGEEALYKGGLYVRTTLDPRLQE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEECCCHHHHH IGARALRKGLIDYDRRHGWRGPVTRLENVQEWKARLAELPVPPGASTNWRLAAVLRLDAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC EVKLGLPDGFGGAIPMKEMAWARPTLDGQRVGNAPKKPADVLKVGDVVLVEPLEKDDKGK CEEECCCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCC AYAPGTYGLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPF EECCCCCCHHHCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCE VYLAALDHGYTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTV EEEEEECCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCEEEE RLANAVGMDVVAEYAERFGVVHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTL EEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IDRIQDRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNREIMTDPLSAYQIVSILQGVV HHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHH QRGTGGKVQAVGKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTT HCCCCCEEHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHCCCCCCCCCC AAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEPSL HHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC ASSYVIDGSAPVGDYGAYYGGVGGEGATGVPGQAAPGFGAGGAPPQAGGLY CCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRILLTLVMIGMVGGAGGTAYLLNSYGSDLPDYGALANYEPPITTRVLASDGRLMAEYA CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH IEKRVYVPINAIPQKVKDAFLSAEDKNFYTHSGVDFVGLFRAVLTNLQNYGSGRRPVGAS HHCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHH TITQQVAKNFLLTNEVSFDRKVKEAILAFRIEEAFSKDHILELYLNEIYLGFSSYGVAAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHH AVNYFNKSLDELTIGEVAFLAALPKAPNNYNPVRKNDAAKARRDWVVDRMVEDDHITQAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC GEAAKAEPLEVRSRDETQLVRHADFFSEEVRRQLQSRYGEEALYKGGLYVRTTLDPRLQE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEECCCHHHHH IGARALRKGLIDYDRRHGWRGPVTRLENVQEWKARLAELPVPPGASTNWRLAAVLRLDAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC EVKLGLPDGFGGAIPMKEMAWARPTLDGQRVGNAPKKPADVLKVGDVVLVEPLEKDDKGK CEEECCCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCC AYAPGTYGLRQMPNVEGALVAMDPHTGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPF EECCCCCCHHHCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCE VYLAALDHGYTPATIILDAPFVYDPGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTV EEEEEECCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCEEEE RLANAVGMDVVAEYAERFGVVHTMPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTL EEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IDRIQDRTGTTVYRHDERPCDACKASQWAGQAVPAVVDNREIMTDPLSAYQIVSILQGVV HHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHH QRGTGGKVQAVGKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDEPKSLGSHEAGSTT HCCCCCEEHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHCCCCCCCCCC AAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAFKPGSEPSL HHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC ASSYVIDGSAPVGDYGAYYGGVGGEGATGVPGQAAPGFGAGGAPPQAGGLY CCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]