Click here to switch to the map view.

The map label for this gene is 83593466

Identifier: 83593466

GI number: 83593466

Start: 2475492

End: 2475743

Strand: Reverse

Name: 83593466

Synonym: Rru_A2131

Alternate gene names: NA

Gene position: 2475743-2475492 (Counterclockwise)

Preceding gene: 83593467

Following gene: 83593461

Centisome position: 56.88

GC content: 55.95

Gene sequence:

>252_bases
TTGGTCACCAAAACACAACTCCAACCGAGGGTGACCACGATGACCTACGAGATGATGGCGCTGCGCACGATGTTGGAAAA
GGGGGCTGACGCCGATGTTCTGCGGGACATGATCGGCTTTGCCGTGCACCGTTTGATGGAACTGGAGGTCCAGGCTCACA
CCGGCGCGGCGCTGGGTGAACGCTCGCCTGACCGCGTAGCTCACCACAATGAGCTTCAAGCCAATAGTGAAAAGGTAGAG
AATTTCAACTAA

Upstream 100 bases:

>100_bases
ATCGATCACGGCCACCGCCGAGGGATTCGAATCGCGTCCCCGGATGTGGTGTAGGAGGGCTATCCTGGCAGGGGCGGTCA
TCGTGGATCTTCGGTAAAGT

Downstream 100 bases:

>100_bases
AAAATGCAAAATTATATTAAAGGAGGGGAAATGTATCAAGAAGATATTTATCGACTATCACCGAATGAGTGGGAATGGTT
TGCGCAAGATATCTTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; Fragment Of Transposase Protein; Insertion Sequence Transposase Protein

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MVTKTQLQPRVTTMTYEMMALRTMLEKGADADVLRDMIGFAVHRLMELEVQAHTGAALGERSPDRVAHHNELQANSEKVE
NFN

Sequences:

>Translated_83_residues
MVTKTQLQPRVTTMTYEMMALRTMLEKGADADVLRDMIGFAVHRLMELEVQAHTGAALGERSPDRVAHHNELQANSEKVE
NFN
>Mature_83_residues
MVTKTQLQPRVTTMTYEMMALRTMLEKGADADVLRDMIGFAVHRLMELEVQAHTGAALGERSPDRVAHHNELQANSEKVE
NFN

Specific function: Unknown

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9383; Mature: 9383

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKTQLQPRVTTMTYEMMALRTMLEKGADADVLRDMIGFAVHRLMELEVQAHTGAALGE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RSPDRVAHHNELQANSEKVENFN
CCCHHHHHCCHHHCCHHHCCCCC
>Mature Secondary Structure
MVTKTQLQPRVTTMTYEMMALRTMLEKGADADVLRDMIGFAVHRLMELEVQAHTGAALGE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RSPDRVAHHNELQANSEKVENFN
CCCHHHHHCCHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA