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The map label for this gene is ycgM [C]

Identifier: 83593461

GI number: 83593461

Start: 2468818

End: 2469660

Strand: Reverse

Name: ycgM [C]

Synonym: Rru_A2126

Alternate gene names: 83593461

Gene position: 2469660-2468818 (Counterclockwise)

Preceding gene: 83593466

Following gene: 83593460

Centisome position: 56.74

GC content: 65.6

Gene sequence:

>843_bases
ATGAAACTCTTGCGTTATGGTCCCGTGGGTCGGGAACGGCCCGGTCTGATCGACGCCGATGGCCGCATCCGCGATCTTAG
CGATTATCTTGCCGATTTCGCCGGGGCCTCGCTGGGGCCCGCGTCGCTGGCCCGCCTTTCCAACCTTGATCCGGCCGATC
TGCCGCTGGTCGAAGGACAGCCGCGCCTTGGCCCCTGTGTCGGCCATGTCGGCAAGCTGATCTGCATCGGCCTGAATTAC
TCCGATCACGCCGCCGAAACCGGCGCCAGCGTGCCCAGCGAGCCGATCGTTTTCCTCAAGGCGACCAGCGCCATCGTCGG
CCCCAACGACGACCTGGAACTTCCGCGCGGATCGACCAAGACCGATTGGGAGGTGGAACTGGGCGTCGTCATCGGCACCC
CCGCCAAATATGTGAGCGAGGAGGACGCCCTGGACCATGTCGCGGGCTATTGCGTGGTTCACGACGTCTCCGAACGCGCC
TTCCAACTGGAGCGCCAGGGCCAATGGACCAAGGGCAAGTCCTGCGACACCTTCGGCCCCATCGGCCCCTGGCTGGTCAC
CGCCGACGAGATCGCCGATCCCCAAGACCTTGACCTGTGGCTCGAGGTCAACGGCGAGCGCCGGCAGACCGGCTCGACGC
GGACGATGATCTTCGGCGTCGCCCGCTTGGTCTCCTATCTTTCGCAGATCATGACCCTGCACCCCGGCGATATCCTGTCC
ACCGGAACGCCCCCCGGGGTCGGCCTGGGGATGACGCCGCCAACCTTCCTTCAGCCCGGCGACGTGGTCCGCCTTGGGGT
CGAGGGCTTGGGCGTTCAGTGCCAGACGGTTATCCAGGGATAA

Upstream 100 bases:

>100_bases
CGTCAAGGGCAAAGGCGGCGAGAGCCGTGTAGGGCTTGCCGAGGGCGGGGGGGACGTGGCACTGCTTGGGGCGTTGTTTT
TCCTGGGGTGATGGAACACC

Downstream 100 bases:

>100_bases
CCCCACCGCCGTCCATTGCCGCTTTTAAGCGCCGCGTTGGCCGCCCGCTCCGCTGCCGATTCGGCGCCAGAGCGGGACGG
GGCCGCGCCGATCACCGGGC

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKLLRYGPVGRERPGLIDADGRIRDLSDYLADFAGASLGPASLARLSNLDPADLPLVEGQPRLGPCVGHVGKLICIGLNY
SDHAAETGASVPSEPIVFLKATSAIVGPNDDLELPRGSTKTDWEVELGVVIGTPAKYVSEEDALDHVAGYCVVHDVSERA
FQLERQGQWTKGKSCDTFGPIGPWLVTADEIADPQDLDLWLEVNGERRQTGSTRTMIFGVARLVSYLSQIMTLHPGDILS
TGTPPGVGLGMTPPTFLQPGDVVRLGVEGLGVQCQTVIQG

Sequences:

>Translated_280_residues
MKLLRYGPVGRERPGLIDADGRIRDLSDYLADFAGASLGPASLARLSNLDPADLPLVEGQPRLGPCVGHVGKLICIGLNY
SDHAAETGASVPSEPIVFLKATSAIVGPNDDLELPRGSTKTDWEVELGVVIGTPAKYVSEEDALDHVAGYCVVHDVSERA
FQLERQGQWTKGKSCDTFGPIGPWLVTADEIADPQDLDLWLEVNGERRQTGSTRTMIFGVARLVSYLSQIMTLHPGDILS
TGTPPGVGLGMTPPTFLQPGDVVRLGVEGLGVQCQTVIQG
>Mature_280_residues
MKLLRYGPVGRERPGLIDADGRIRDLSDYLADFAGASLGPASLARLSNLDPADLPLVEGQPRLGPCVGHVGKLICIGLNY
SDHAAETGASVPSEPIVFLKATSAIVGPNDDLELPRGSTKTDWEVELGVVIGTPAKYVSEEDALDHVAGYCVVHDVSERA
FQLERQGQWTKGKSCDTFGPIGPWLVTADEIADPQDLDLWLEVNGERRQTGSTRTMIFGVARLVSYLSQIMTLHPGDILS
TGTPPGVGLGMTPPTFLQPGDVVRLGVEGLGVQCQTVIQG

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=208, Percent_Identity=50, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI40786394, Length=208, Percent_Identity=49.0384615384615, Blast_Score=213, Evalue=1e-55,
Organism=Homo sapiens, GI66348062, Length=202, Percent_Identity=38.6138613861386, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI215422413, Length=201, Percent_Identity=38.8059701492537, Blast_Score=142, Evalue=2e-34,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=38.8059701492537, Blast_Score=142, Evalue=3e-34,
Organism=Escherichia coli, GI1787428, Length=203, Percent_Identity=37.4384236453202, Blast_Score=136, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17557057, Length=199, Percent_Identity=37.6884422110553, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6324161, Length=229, Percent_Identity=32.3144104803493, Blast_Score=105, Evalue=8e-24,
Organism=Drosophila melanogaster, GI28572127, Length=290, Percent_Identity=42.7586206896552, Blast_Score=207, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24663695, Length=282, Percent_Identity=33.6879432624113, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=38.9162561576355, Blast_Score=144, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 29823; Mature: 29823

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRYGPVGRERPGLIDADGRIRDLSDYLADFAGASLGPASLARLSNLDPADLPLVEGQ
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCC
PRLGPCVGHVGKLICIGLNYSDHAAETGASVPSEPIVFLKATSAIVGPNDDLELPRGSTK
CCCCHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCC
TDWEVELGVVIGTPAKYVSEEDALDHVAGYCVVHDVSERAFQLERQGQWTKGKSCDTFGP
CCEEEEEEEEEECCHHHHCHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCC
IGPWLVTADEIADPQDLDLWLEVNGERRQTGSTRTMIFGVARLVSYLSQIMTLHPGDILS
CCCEEEEHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TGTPPGVGLGMTPPTFLQPGDVVRLGVEGLGVQCQTVIQG
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MKLLRYGPVGRERPGLIDADGRIRDLSDYLADFAGASLGPASLARLSNLDPADLPLVEGQ
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCC
PRLGPCVGHVGKLICIGLNYSDHAAETGASVPSEPIVFLKATSAIVGPNDDLELPRGSTK
CCCCHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCC
TDWEVELGVVIGTPAKYVSEEDALDHVAGYCVVHDVSERAFQLERQGQWTKGKSCDTFGP
CCEEEEEEEEEECCHHHHCHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCC
IGPWLVTADEIADPQDLDLWLEVNGERRQTGSTRTMIFGVARLVSYLSQIMTLHPGDILS
CCCEEEEHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TGTPPGVGLGMTPPTFLQPGDVVRLGVEGLGVQCQTVIQG
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA