Click here to switch to the map view.

The map label for this gene is yjnA [H]

Identifier: 83593435

GI number: 83593435

Start: 2434712

End: 2435635

Strand: Reverse

Name: yjnA [H]

Synonym: Rru_A2100

Alternate gene names: 83593435

Gene position: 2435635-2434712 (Counterclockwise)

Preceding gene: 83593436

Following gene: 83593434

Centisome position: 55.96

GC content: 65.69

Gene sequence:

>924_bases
ATGCAGATTTACCTGCCGATCGCCGAGATGTCCGTCAACGTTCTGCTCATCCTTGGCATGGGGGGGGTCGTTGGGTTCCT
ATCGGGGCTGTTCGGGGTTGGCGGCGGCTTCCTGCTGACGCCGCTTTTGATCCTCTATGGTGTTCCCCCCGCCGTCGCCG
TCGGCACCCAGGCCAATCAGATCGTCGCCACCTCGGTCGCCGGCGTCCTCGCCCACATGCGGCGCGGCAATGTCGACTTC
AAGATGGGCTTCGTGCTGCTGATCGGCGGTCTGGCCGGATCGGTGGTCGGCGTCTGGCTGTTCGCCCTGTTGCACCGCCT
GGGCCAGATCGATCTGGCGATTTCGCTAAGCTATGTGATTTTCCTGGGCGCGGTCGGCGGCTTGATGTTCGTGGAAAGCG
CCACCGTGCTGATCCGCCGGCGGCGCTCGCCCGGCGTGCCCGTCGCCCGTGGGCCCGGGCGCCACACTTGGATGCATGGC
CTGCCGCTCAAGATGCGCTTTCGGCGCTCCAAGCTTTACATCAGCGCCATTCTGCCGCTGACCATCGGCTTTCTGGTTGG
CATCCTGGCGGCGATCATGGGCGTGGGCGGCGGCTTCGTCATGGTGCCGGCGATGATTTATCTGCTGGGCATGCCGACCC
AGGTCGTGGTGGGAACCAGCCTGTTCCAGATCATTTTCGTCGCCGCCTCCACCGCCATCCTCCAGGCGGCGGTCAATCAA
ACGGTGGATGTCGTGCTGGCCCTGCTGCTGCTGGCCGGGGCGGTTTTTGGCGCCCAGGCCGGGGCCAAGGCCGGGGCCCG
ACTGCGCGGCGAGCAACTGCGCGCCCTGCTGGCGGTGATGGTTCTGCTGGTCTGCGGCAAGCTGGCTTACGACCTTATGG
CGACCCCGGGCGAGATGTTCTCGTTTGGCGCCCTGCTCGATTGA

Upstream 100 bases:

>100_bases
GGGCCGGTCCGGGGCTTGCAACCGGGGCGGCGTCGGGGTCTTATCGAGATCAGCCCCCCGCAAGGTCGCCACGCGCGAAC
CCGTCCCGGAAAGCCCGCTT

Downstream 100 bases:

>100_bases
GCGCTTAACCCCCGTATCCTCTGGATTTTTTTGCGACCAATCGCCCCGCTGCCGGCATCCCTCCCGCCTGTGGAACGTTG
CGTTTCGGTCAAACGGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLILYGVPPAVAVGTQANQIVATSVAGVLAHMRRGNVDF
KMGFVLLIGGLAGSVVGVWLFALLHRLGQIDLAISLSYVIFLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHG
LPLKMRFRRSKLYISAILPLTIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTAILQAAVNQ
TVDVVLALLLLAGAVFGAQAGAKAGARLRGEQLRALLAVMVLLVCGKLAYDLMATPGEMFSFGALLD

Sequences:

>Translated_307_residues
MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLILYGVPPAVAVGTQANQIVATSVAGVLAHMRRGNVDF
KMGFVLLIGGLAGSVVGVWLFALLHRLGQIDLAISLSYVIFLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHG
LPLKMRFRRSKLYISAILPLTIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTAILQAAVNQ
TVDVVLALLLLAGAVFGAQAGAKAGARLRGEQLRALLAVMVLLVCGKLAYDLMATPGEMFSFGALLD
>Mature_307_residues
MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLILYGVPPAVAVGTQANQIVATSVAGVLAHMRRGNVDF
KMGFVLLIGGLAGSVVGVWLFALLHRLGQIDLAISLSYVIFLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHG
LPLKMRFRRSKLYISAILPLTIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTAILQAAVNQ
TVDVVLALLLLAGAVFGAQAGAKAGARLRGEQLRALLAVMVLLVCGKLAYDLMATPGEMFSFGALLD

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32026; Mature: 32026

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLILYGVPPAVAVGTQANQ
CEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEECCCCCH
IVATSVAGVLAHMRRGNVDFKMGFVLLIGGLAGSVVGVWLFALLHRLGQIDLAISLSYVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHGLPLKMRFRRSKLYISAILPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
TIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTAILQAAVNQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDVVLALLLLAGAVFGAQAGAKAGARLRGEQLRALLAVMVLLVCGKLAYDLMATPGEMF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SFGALLD
HHCCCCC
>Mature Secondary Structure
MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLILYGVPPAVAVGTQANQ
CEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEECCCCCH
IVATSVAGVLAHMRRGNVDFKMGFVLLIGGLAGSVVGVWLFALLHRLGQIDLAISLSYVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHGLPLKMRFRRSKLYISAILPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
TIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTAILQAAVNQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDVVLALLLLAGAVFGAQAGAKAGARLRGEQLRALLAVMVLLVCGKLAYDLMATPGEMF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SFGALLD
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]