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The map label for this gene is glnB

Identifier: 83593420

GI number: 83593420

Start: 2413702

End: 2414040

Strand: Direct

Name: glnB

Synonym: Rru_A2085

Alternate gene names: 83593420

Gene position: 2413702-2414040 (Clockwise)

Preceding gene: 83593417

Following gene: 83593421

Centisome position: 55.45

GC content: 60.18

Gene sequence:

>339_bases
ATGAAAAAGATCGAAGCGATCATCAAGCCCTTCAAGCTCGATGAGGTGAAGGAAGCCCTTCACGAAATCGGCCTGCAGGG
GATCACCGTCACCGAGGCGAAAGGCTTTGGCCGCCAAAAGGGCCACACGGAACTGTACCGCGGTGCGGAGTACGTTGTGG
ATTTCCTGCCCAAGGTCAAGATCGAGCTGGTGATCGAGGATGCGCTTGTGGAACGCGCGATCGAGGCCATCCAGCAGGCG
GCGCAAACGGGCCGCATTGGCGACGGCAAGATCTTCGTCTACGCCATCGAAGAGGCCATCCGCATCCGTACAGGGGAGCG
GGGCGGCGACGCGATCTAG

Upstream 100 bases:

>100_bases
CTTGGGTGATCATTGAACCAGTGGCACGAGGCGTGATAAGGGATCCCCATCGTCCCGCAAAGGACGGGTGCCGACCAACC
AGCCGGAGCGACCGGATTTC

Downstream 100 bases:

>100_bases
CGCCACCGCCCGTCATTCTGGGGGGGCTTGCCCGCCCGGCTCCGGCCTTCGGGCCGGTTCGCCGGCGGTTCGGAGCGAAT
ACGAACCGGATCGCCGCTTT

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKKIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVKIELVIEDALVERAIEAIQQA
AQTGRIGDGKIFVYAIEEAIRIRTGERGGDAI

Sequences:

>Translated_112_residues
MKKIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVKIELVIEDALVERAIEAIQQA
AQTGRIGDGKIFVYAIEEAIRIRTGERGGDAI
>Mature_112_residues
MKKIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVKIELVIEDALVERAIEAIQQA
AQTGRIGDGKIFVYAIEEAIRIRTGERGGDAI

Specific function: P-II indirectly controls the transcription of the glutamine synthetase gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family

Homologues:

Organism=Escherichia coli, GI1788904, Length=112, Percent_Identity=68.75, Blast_Score=160, Evalue=2e-41,
Organism=Escherichia coli, GI1786655, Length=106, Percent_Identity=64.1509433962264, Blast_Score=141, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLNB_RHORT (Q53044)

Other databases:

- EMBL:   X84158
- EMBL:   AF029703
- EMBL:   CP000230
- PIR:   S52328
- RefSeq:   YP_427172.1
- ProteinModelPortal:   Q53044
- SMR:   Q53044
- STRING:   Q53044
- GeneID:   3835512
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2085
- NMPDR:   fig|1085.1.peg.2663
- eggNOG:   COG0347
- HOGENOM:   HBG748089
- OMA:   IERYRGN
- PhylomeDB:   Q53044
- ProtClustDB:   CLSK744941
- BioCyc:   RRUB269796:RRU_A2085-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- InterPro:   IPR002332
- Gene3D:   G3DSA:3.30.70.120
- PRINTS:   PR00340
- SMART:   SM00938

Pfam domain/function: PF00543 P-II; SSF54913 N-reg_PII-like_a/b

EC number: NA

Molecular weight: Translated: 12421; Mature: 12421

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00638 PII_GLNB_CTER; PS51343 PII_GLNB_DOM; PS00496 PII_GLNB_UMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVK
CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHH
IELVIEDALVERAIEAIQQAAQTGRIGDGKIFVYAIEEAIRIRTGERGGDAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVK
CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHH
IELVIEDALVERAIEAIQQAAQTGRIGDGKIFVYAIEEAIRIRTGERGGDAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704966