| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593417
Identifier: 83593417
GI number: 83593417
Start: 2410569
End: 2411198
Strand: Direct
Name: 83593417
Synonym: Rru_A2082
Alternate gene names: NA
Gene position: 2410569-2411198 (Clockwise)
Preceding gene: 83593416
Following gene: 83593420
Centisome position: 55.38
GC content: 65.24
Gene sequence:
>630_bases ATGGCGCCCCACAGTTGGTCAAACCGCTACGCCACGGGATTGCGGGCGATTGACGATGACCACCGGGGACTGTTCGAATT GGTCGACGCCCTGGAGGAACACCACGAGAAAGCCTCGGGCTCCTCTTTGGTCGCCGCGACCATCGCGGCGCTTCAGGTCT ACGCCGCCGAACATTTCGCCCGCGAAGAGCGCTTCATGCGCAAGGCCCATTTCCCCGATTTCGAACGCCACCACCGCATC CACGAGGATTTCCGCGCCCTGGTCGACGCCCTGGCGCGTTTTCAAGGCCAAAGCCCCGACAGCGTCGACCTTGGCCGGGT GACCCGCTTCCTCAACCGCTGGATCGGCGAGCATATCCTGGTCAAGGATATGGAATACCTGCCCTATGTGACCGGCGAGG CCACCGGCACGCCCCACAGCCTGGAAAAGCCGGCGCTGACGGAACTAACGGTCCATGTGCCCGCCGAGAAGCGCGACGCG GTGATCCAATTCGCCGCGCTGCTCACCGAAGGGGGCGAAATCGCCGAAGCCCTGGAACAGGCCCTATCCACCCGCCTGCG CCAGCGCTTCGAGCGCTTCGACCGCCAAGCGCATGCCCTGTTCGAACGCCACGAGCCCCCCGCCCCCTGA
Upstream 100 bases:
>100_bases TAGTTAAAATGCGACCAATTTTCAAAACCTTGCAGGATGCCCGAAAACCTCGCATGCTGCGCTGAAAGGGATCACAAACT AATAATAAGGACTTAGCATC
Downstream 100 bases:
>100_bases CCGGACAAGGCCCCCCTCGCGTCGCCAAGACGGCCGAAAGCGGCGAGCGGGAAATCCGGTTCCCGCTCGCCGCTCTCAGA GCTTGATCGTCACGCAAAAC
Product: hemerythrin HHE cation binding region
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Sensory Transducer; Hemerythrin-Like Protein; Hemerythrin Family Protein; Methyl-Accepting Chemotaxis Protein; Chemotaxis Sensory Transducer
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MAPHSWSNRYATGLRAIDDDHRGLFELVDALEEHHEKASGSSLVAATIAALQVYAAEHFAREERFMRKAHFPDFERHHRI HEDFRALVDALARFQGQSPDSVDLGRVTRFLNRWIGEHILVKDMEYLPYVTGEATGTPHSLEKPALTELTVHVPAEKRDA VIQFAALLTEGGEIAEALEQALSTRLRQRFERFDRQAHALFERHEPPAP
Sequences:
>Translated_209_residues MAPHSWSNRYATGLRAIDDDHRGLFELVDALEEHHEKASGSSLVAATIAALQVYAAEHFAREERFMRKAHFPDFERHHRI HEDFRALVDALARFQGQSPDSVDLGRVTRFLNRWIGEHILVKDMEYLPYVTGEATGTPHSLEKPALTELTVHVPAEKRDA VIQFAALLTEGGEIAEALEQALSTRLRQRFERFDRQAHALFERHEPPAP >Mature_208_residues APHSWSNRYATGLRAIDDDHRGLFELVDALEEHHEKASGSSLVAATIAALQVYAAEHFAREERFMRKAHFPDFERHHRIH EDFRALVDALARFQGQSPDSVDLGRVTRFLNRWIGEHILVKDMEYLPYVTGEATGTPHSLEKPALTELTVHVPAEKRDAV IQFAALLTEGGEIAEALEQALSTRLRQRFERFDRQAHALFERHEPPAP
Specific function: Unknown
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23820; Mature: 23689
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00550 HEMERYTHRINS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPHSWSNRYATGLRAIDDDHRGLFELVDALEEHHEKASGSSLVAATIAALQVYAAEHFA CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REERFMRKAHFPDFERHHRIHEDFRALVDALARFQGQSPDSVDLGRVTRFLNRWIGEHIL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHH VKDMEYLPYVTGEATGTPHSLEKPALTELTVHVPAEKRDAVIQFAALLTEGGEIAEALEQ HHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH ALSTRLRQRFERFDRQAHALFERHEPPAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure APHSWSNRYATGLRAIDDDHRGLFELVDALEEHHEKASGSSLVAATIAALQVYAAEHFA CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REERFMRKAHFPDFERHHRIHEDFRALVDALARFQGQSPDSVDLGRVTRFLNRWIGEHIL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHH VKDMEYLPYVTGEATGTPHSLEKPALTELTVHVPAEKRDAVIQFAALLTEGGEIAEALEQ HHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH ALSTRLRQRFERFDRQAHALFERHEPPAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA