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The map label for this gene is yvaQ [H]

Identifier: 83593411

GI number: 83593411

Start: 2403936

End: 2405621

Strand: Direct

Name: yvaQ [H]

Synonym: Rru_A2076

Alternate gene names: 83593411

Gene position: 2403936-2405621 (Clockwise)

Preceding gene: 83593410

Following gene: 83593413

Centisome position: 55.23

GC content: 63.46

Gene sequence:

>1686_bases
ATGACTTCTCTAAACAATCTTTCCGTTGGCCGTAAGCTTATCCTGGTCTTTTCCCTTCTCTTCCTGATGGTTGCCTGTCT
CGGCGGTTTTTCGATCAAGGCGCTATCGGACATGAATGGGGCGGCGACCGATGTTTCGCAGACCCGTTTGCCGGCCATCG
ACAAGGCGCGCAGCCTGCAGTTCCTGATCTCCCGCCTACGCACCAACCAGATGGCTTACATGGTCGCCCAGGGCAGCGGC
CTGGAAACGACCCGCAAGACCGTCGAGCAGACGGAGAAGGTCCTCGCCGCGACCCGGGCCGAGTATGAAAAACTGATGTC
CTCGGCCGAAGAGCGCGAAGCCTATAAGACCTTCGCCGACAATTACGCCGGCTTTGCCGCCGGACTGGTGCGCATCGCCG
ATCTCAGCAAGGCCGGACGCATCGACGAAGCCCGCGAATTGACCTGGGGGGAAACCCGCCCCTTCTATCTGGCGCTCGTC
AAATCAACCGACCGGTTGACCGAATTGAGCCAGATTCAGGCCGCCGTGGCGGCGGCGAATATCGACCACACCAATCGCAT
CGCCCGTATCGGCATCATCGCCGCCTTGATCGCCGTTCTCATCGTTGCCGCCGTCGCCGGGGCGTTGCTGCGCCAGACCA
TCGCCGCCCCCTTGCTGGCGCTCCGCGCCACCATGGAGCGTCTGGCCCGCGACGACACCGCCGTCGATATCCCCGGCCAC
AACCGCAAGGACGAAGTTGGCGCCATGGCCCGCGCCGTTCTGGTCTTCAAGGACAGCATGATCGAAAGCCAGGGGCTGCG
CGCCCGCGAAAACGCCGAACGCGCCAGCCAGGAACAGCGCGCCGCAACCTTGTCCCTGCTGACCCAGGACTTCGATACCA
AGGCCAGTTCGGTGATCAATGATGTCGCCGAGGCCGCCGGCACCATGCAAACCACCGCCTCGCAATTGACGCAGGCGACC
GAAAGCACGGCCGAGCAAAGCACCGCCGTCGCCGCCGCCGCCCAAGAGGCTTCGACCAACGTACAGACCGTCGCCGCCGC
CGCCGAGGAATTGACCTCATCGATCGGCGAGATCAGCCGACAGATCGCCCAGGCCTCCCATGTCAGCCAGAAGGCGGTCG
ATCAGGCGGCCCATACCACCGGCATCGTCGGCGGCCTGGAACAGGCTGCCAAACGCATTGGCGAGGTTGTCGCCATGATC
AATGACATCGCCAGCCAGACCAATCTTCTGGCGCTGAACGCGACGATCGAGGCGGCGCGGGCCGGTGATGCCGGCAAGGG
CTTCGCCGTGGTCGCCGGCGAAGTGAAATCGCTGGCCAATCAGACGGCGCGGGCGACCGACGATATCACCCAGCAGATCG
GCTCGGTGCAGACGGCGACGGGCGCGGCGGTTCAGGCAATCAACGAGATCGCCACGACCATCGGCGAGATCAACGAAATC
TCGGCCAATATCGCTGCGGCGATGGAACAGCAAGGCGCGGCGACCCAGGAAATCGCCCGCAACGTCGAACAGGCGGCGAC
CGGAACCGATCAGGTGACCCGCAACATTCACGGCGTCAATCAAACCGTTGATAATACCGGGCAATCCGCCAAAGACGTCT
TGAATGCCGCTACCCGGCTGCGCGACGAATCCGCGGCCATGCAGACGCTGGTGACCACCTTCCTCGACAAGGTCCGCGCC
CTATAA

Upstream 100 bases:

>100_bases
AATAGATCAATCGCCCTGCAAAGTCTTTTTCTACAAAATTGAATAAAATGCTCTTTTTTACTGGGCAGGAGCGATTGTCT
TTATAAAATGGGGGATACTC

Downstream 100 bases:

>100_bases
GGCCAAGGCCCGCGCCGCCGTCCCGACCGAGGCGAGATCGGCAGGGCGGCGCGGGGCTGACGTCAGACGTTAAGCAGCAA
ATATTCGCGTTCCCAGCTTG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MTSLNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQFLISRLRTNQMAYMVAQGSG
LETTRKTVEQTEKVLAATRAEYEKLMSSAEEREAYKTFADNYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALV
KSTDRLTELSQIQAAVAAANIDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERLARDDTAVDIPGH
NRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLTQDFDTKASSVINDVAEAAGTMQTTASQLTQAT
ESTAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMI
NDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAINEIATTIGEINEI
SANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQSAKDVLNAATRLRDESAAMQTLVTTFLDKVRA
L

Sequences:

>Translated_561_residues
MTSLNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQFLISRLRTNQMAYMVAQGSG
LETTRKTVEQTEKVLAATRAEYEKLMSSAEEREAYKTFADNYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALV
KSTDRLTELSQIQAAVAAANIDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERLARDDTAVDIPGH
NRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLTQDFDTKASSVINDVAEAAGTMQTTASQLTQAT
ESTAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMI
NDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAINEIATTIGEINEI
SANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQSAKDVLNAATRLRDESAAMQTLVTTFLDKVRA
L
>Mature_560_residues
TSLNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQFLISRLRTNQMAYMVAQGSGL
ETTRKTVEQTEKVLAATRAEYEKLMSSAEEREAYKTFADNYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALVK
STDRLTELSQIQAAVAAANIDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERLARDDTAVDIPGHN
RKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLTQDFDTKASSVINDVAEAAGTMQTTASQLTQATE
STAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMIN
DIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAINEIATTIGEINEIS
ANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQSAKDVLNAATRLRDESAAMQTLVTTFLDKVRAL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=537, Percent_Identity=25.1396648044693, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788195, Length=209, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=460, Percent_Identity=24.1304347826087, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788194, Length=199, Percent_Identity=35.1758793969849, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789453, Length=259, Percent_Identity=30.8880308880309, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59111; Mature: 58980

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHH
FLISRLRTNQMAYMVAQGSGLETTRKTVEQTEKVLAATRAEYEKLMSSAEEREAYKTFAD
HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALVKSTDRLTELSQIQAAVAAAN
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHC
IDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERLARDDTAVDIPGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
NRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLTQDFDTKASSVIN
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVAEAAGTMQTTASQLTQATESTAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
QIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMINDIASQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH
AGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAINEIATTIGEINEI
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQSAKDVLNAATRL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RDESAAMQTLVTTFLDKVRAL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSLNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCHHHHHHHHH
FLISRLRTNQMAYMVAQGSGLETTRKTVEQTEKVLAATRAEYEKLMSSAEEREAYKTFAD
HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYAGFAAGLVRIADLSKAGRIDEARELTWGETRPFYLALVKSTDRLTELSQIQAAVAAAN
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHC
IDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERLARDDTAVDIPGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
NRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLTQDFDTKASSVIN
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVAEAAGTMQTTASQLTQATESTAEQSTAVAAAAQEASTNVQTVAAAAEELTSSIGEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
QIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMINDIASQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH
AGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAINEIATTIGEINEI
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQSAKDVLNAATRL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RDESAAMQTLVTTFLDKVRAL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]